FFCP PHASE1:Hg19::chr6:132271998..132272086,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:132271998..132272086,- to FFCP PHASE1:Hg19::chr6:132271998..132272086,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt=P29279 | |UniProt=P29279 | ||
|association_with_transcript=-20bp_to_U14750_5end | |||
|cluster_id=chr6:132271998..132272086,- | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_2_at_CTGF_5end | |||
|id=chr6:132271998..132272086,- | |||
|ontology_enrichment_celltype=CL:0000055!2.40e-28!180;CL:0000222!6.08e-26!119;CL:0000393!1.37e-15!60;CL:0000211!1.37e-15!60;CL:0000680!2.28e-15!57;CL:0000056!2.28e-15!57;CL:0000355!2.28e-15!57;CL:0000220!3.43e-15!246;CL:0000183!3.54e-15!59;CL:0000187!4.72e-15!54;CL:0002321!7.37e-15!248;CL:0000192!3.40e-14!42;CL:0000514!3.40e-14!42;CL:0000359!1.62e-13!32;CL:0002139!2.17e-12!24;CL:0000057!3.88e-12!75;CL:0000115!2.10e-11!35;CL:0002078!8.57e-11!44;CL:0000213!1.90e-10!57;CL:0000215!1.90e-10!57;CL:0000071!1.04e-09!18;CL:0002546!1.04e-09!18;CL:0002334!4.55e-07!12;CL:0002494!6.45e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.74e-16;24!CL:0000359;1.20e-15;32!CL:0000115;8.20e-14;36!CL:0000071;5.04e-12;18!CL:0000192;1.05e-10;43!CL:0002078;7.66e-10;45!CL:0002334;1.09e-08;12!CL:1000413;1.87e-08;9!CL:0000187;9.30e-08;55!CL:0002494;3.92e-07;16!CL:0000213;5.62e-07;58!CL:0000215;5.62e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.71e-24,121;CL:0000359,4.51e-16,32;CL:0002139,1.11e-15,24;CL:0000115,1.31e-15,36;CL:0000192,6.44e-15,43;CL:0000514,6.44e-15,43;CL:0000680,3.54e-14,58;CL:0000056,3.54e-14,58;CL:0000355,3.54e-14,58;CL:0000187,5.70e-14,55;CL:0002078,1.57e-13,45;CL:0000393,1.83e-13,61;CL:0000211,1.83e-13,61;CL:0000057,1.10e-12,76;CL:0000071,6.36e-12,18;CL:0002546,6.36e-12,18;CL:0000213,8.31e-11,58;CL:0000215,8.31e-11,58;CL:0002321,1.38e-10,250;CL:0002334,1.17e-08,12;CL:1000413,2.06e-08,9;CL:0000048,4.80e-08,427;CL:0000723,1.89e-07,433;CL:0002494,5.04e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;5.04e-12;18!CL:0000514;1.05e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.39e-31!79;UBERON:0007798!2.39e-31!79;UBERON:0004872!3.61e-27!84;UBERON:0000055!3.61e-27!69;UBERON:0003914!5.67e-26!118;UBERON:0001981!1.33e-24!60;UBERON:0007500!1.33e-24!60;UBERON:0004537!1.33e-24!60;UBERON:0006965!1.33e-24!60;UBERON:0004535!6.98e-24!110;UBERON:0001009!2.25e-23!113;UBERON:0001637!3.19e-20!42;UBERON:0003509!3.19e-20!42;UBERON:0004572!3.19e-20!42;UBERON:0000490!3.70e-20!138;UBERON:0005256!8.45e-16!143;UBERON:0004573!1.02e-15!33;UBERON:0004571!1.02e-15!33;UBERON:0002385!7.40e-15!63;UBERON:0001015!7.40e-15!63;UBERON:0000383!7.40e-15!63;UBERON:0001134!8.37e-15!61;UBERON:0002036!8.37e-15!61;UBERON:0003082!8.37e-15!61;UBERON:0000914!2.02e-14!83;UBERON:0002329!2.02e-14!83;UBERON:0003077!2.02e-14!83;UBERON:0003059!2.02e-14!83;UBERON:0007282!2.02e-14!83;UBERON:0009618!2.02e-14!83;UBERON:0007285!2.02e-14!83;UBERON:0000477!2.29e-14!286;UBERON:0002100!1.15e-13!216;UBERON:0004290!1.75e-13!70;UBERON:0000119!2.86e-13!312;UBERON:0000483!7.50e-13!309;UBERON:0000486!9.26e-13!82;UBERON:0000468!1.24e-12!659;UBERON:0004111!1.15e-11!241;UBERON:0000947!5.92e-11!21;UBERON:0010191!5.92e-11!21;UBERON:0000487!8.12e-11!22;UBERON:0006914!1.22e-10!25;UBERON:0000025!3.03e-10!194;UBERON:0000475!4.91e-10!365;UBERON:0001986!1.04e-09!18;UBERON:0004638!1.04e-09!18;UBERON:0004852!1.04e-09!18;UBERON:0000467!1.74e-09!625;UBERON:0000480!2.60e-09!626;UBERON:0003104!7.04e-09!238;UBERON:0009142!7.04e-09!238;UBERON:0000926!7.09e-08!448;UBERON:0004120!7.09e-08!448;UBERON:0006603!7.09e-08!448;UBERON:0000481!1.42e-07!347;UBERON:0000948!4.67e-07!24;UBERON:0005498!4.67e-07!24;UBERON:0004140!4.67e-07!24;UBERON:0009881!4.67e-07!24;UBERON:0004141!4.67e-07!24;UBERON:0003084!4.67e-07!24;UBERON:0007005!4.67e-07!24;UBERON:0004139!4.67e-07!24;UBERON:0004291!4.67e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.06e-21;42!UBERON:0003509;2.06e-21;42!UBERON:0004572;2.06e-21;42!UBERON:0004573;1.18e-19;33!UBERON:0004571;1.18e-19;33!UBERON:0007500;2.94e-16;56!UBERON:0001981;2.94e-16;56!UBERON:0004537;2.94e-16;56!UBERON:0000055;3.90e-16;65!UBERON:0002049;1.77e-14;75!UBERON:0007798;1.77e-14;75!UBERON:0000947;4.55e-14;21!UBERON:0010191;4.55e-14;21!UBERON:0006914;8.33e-13;25!UBERON:0000487;1.21e-12;22!UBERON:0004638;5.04e-12;18!UBERON:0001986;5.04e-12;18!UBERON:0004852;5.04e-12;18!UBERON:0003914;8.91e-12;74!UBERON:0004535;4.40e-09;109!UBERON:0000490;9.87e-09;33!UBERON:0003915;1.87e-08;9!UBERON:0004700;1.87e-08;9!UBERON:0001917;1.87e-08;9!UBERON:0001009;6.40e-08;112!UBERON:0003688;2.31e-07;6!UBERON:0002358;2.31e-07;6!UBERON:0003684;2.31e-07;6!UBERON:0001178;2.31e-07;6!UBERON:0004457;4.62e-07;9!UBERON:0000042;4.62e-07;9 | |||
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| ||
|short_description=p2@CTGF | |||
}} | }} |
Latest revision as of 19:11, 24 September 2015
Short description: | p2@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | -20bp_to_U14750_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | P29279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.71e-24 | 121 |
vascular associated smooth muscle cell | 4.51e-16 | 32 |
endothelial cell of vascular tree | 1.11e-15 | 24 |
endothelial cell | 1.31e-15 | 36 |
smooth muscle cell | 6.44e-15 | 43 |
smooth muscle myoblast | 6.44e-15 | 43 |
muscle precursor cell | 3.54e-14 | 58 |
myoblast | 3.54e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.54e-14 | 58 |
muscle cell | 5.70e-14 | 55 |
meso-epithelial cell | 1.57e-13 | 45 |
electrically responsive cell | 1.83e-13 | 61 |
electrically active cell | 1.83e-13 | 61 |
fibroblast | 1.10e-12 | 76 |
blood vessel endothelial cell | 6.36e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.36e-12 | 18 |
lining cell | 8.31e-11 | 58 |
barrier cell | 8.31e-11 | 58 |
embryonic cell | 1.38e-10 | 250 |
preadipocyte | 1.17e-08 | 12 |
endothelial cell of artery | 2.06e-08 | 9 |
multi fate stem cell | 4.80e-08 | 427 |
somatic stem cell | 1.89e-07 | 433 |
cardiocyte | 5.04e-07 | 16 |