FFCP PHASE1:Hg19::chr14:60097278..60097282,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |||
|TSSclassifier=strong | |||
|UniProt=A8MT72 | |||
|association_with_transcript=44bp_to_ENST00000395090_5end | |||
|cluster_id=chr14:60097278..60097282,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_RTN1_5end | |||
|id=chr14:60097278..60097282,- | |||
|ontology_enrichment_celltype=CL:0000047!6.73e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.29e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.67e-19;82!UBERON:0006215;5.67e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.41e-87!82;UBERON:0005743!1.24e-85!86;UBERON:0000073!2.00e-85!94;UBERON:0001016!2.00e-85!94;UBERON:0001049!5.20e-84!57;UBERON:0005068!5.20e-84!57;UBERON:0006241!5.20e-84!57;UBERON:0007135!5.20e-84!57;UBERON:0002616!2.12e-73!59;UBERON:0000955!6.85e-70!69;UBERON:0006238!6.85e-70!69;UBERON:0002780!7.90e-64!41;UBERON:0001890!7.90e-64!41;UBERON:0006240!7.90e-64!41;UBERON:0003080!4.20e-62!42;UBERON:0001893!8.30e-61!34;UBERON:0002020!1.29e-60!34;UBERON:0003528!1.29e-60!34;UBERON:0003075!4.03e-59!86;UBERON:0007284!4.03e-59!86;UBERON:0002791!3.05e-58!33;UBERON:0001869!9.42e-57!32;UBERON:0002346!6.50e-56!90;UBERON:0002619!3.03e-52!22;UBERON:0001950!1.39e-47!20;UBERON:0007023!7.32e-47!115;UBERON:0000956!1.99e-45!25;UBERON:0000203!1.99e-45!25;UBERON:0004121!1.62e-44!169;UBERON:0000924!3.89e-43!173;UBERON:0006601!3.89e-43!173;UBERON:0003056!2.54e-42!61;UBERON:0000033!1.97e-37!123;UBERON:0000153!4.30e-35!129;UBERON:0007811!4.30e-35!129;UBERON:0003076!7.57e-22!15;UBERON:0003057!7.57e-22!15;UBERON:0000025!7.20e-19!194;UBERON:0002420!1.34e-16!9;UBERON:0007245!1.34e-16!9;UBERON:0010009!1.34e-16!9;UBERON:0010011!1.34e-16!9;UBERON:0000454!1.34e-16!9;UBERON:0002308!2.83e-16!9;UBERON:0000125!2.83e-16!9;UBERON:0000200!4.08e-16!6;UBERON:0004733!5.61e-16!12;UBERON:0002028!5.61e-16!12;UBERON:0007277!5.61e-16!12;UBERON:0001871!8.37e-16!7;UBERON:0002298!1.26e-14!8;UBERON:0004732!1.34e-14!13;UBERON:0002021!3.73e-14!5;UBERON:0000064!3.77e-14!219;UBERON:0001872!1.64e-13!5;UBERON:0004111!1.70e-13!241;UBERON:0000349!2.88e-13!5;UBERON:0009663!4.68e-12!7;UBERON:0000483!1.54e-11!309;UBERON:0000477!1.95e-11!286;UBERON:0000119!2.68e-11!312;UBERON:0000369!3.19e-10!4;UBERON:0002435!3.19e-10!4;UBERON:0000204!3.19e-10!4;UBERON:0010082!3.19e-10!4;UBERON:0002680!4.21e-10!9;UBERON:0001895!4.21e-10!9;UBERON:0010092!4.21e-10!9;UBERON:0000475!4.36e-10!365;UBERON:0000922!9.53e-09!612;UBERON:0000988!1.44e-08!3;UBERON:0000923!1.65e-08!604;UBERON:0005291!1.65e-08!604;UBERON:0006598!1.65e-08!604;UBERON:0002532!1.65e-08!604;UBERON:0002771!1.68e-08!3;UBERON:0002050!1.82e-08!605;UBERON:0005423!1.82e-08!605;UBERON:0001896!4.45e-08!3;UBERON:0005290!4.45e-08!3;UBERON:0010096!4.45e-08!3;UBERON:0006331!6.42e-08!3;UBERON:0005383!6.74e-08!3;UBERON:0005382!6.74e-08!3;UBERON:0002240!8.59e-08!3;UBERON:0000467!1.29e-07!625;UBERON:0000481!1.36e-07!347;UBERON:0000062!1.36e-07!511;UBERON:0000480!1.42e-07!626;UBERON:0000468!8.10e-07!659;UBERON:0001870!9.16e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.92e-75;22!UBERON:0001950;9.80e-69;20!UBERON:0001869;3.43e-68;32!UBERON:0003528;2.55e-66;34!UBERON:0002020;2.55e-66;34!UBERON:0000956;4.59e-66;25!UBERON:0000203;4.59e-66;25!UBERON:0002791;2.28e-63;32!UBERON:0001893;2.43e-61;34!UBERON:0000073;6.42e-50;53!UBERON:0002616;6.42e-50;53!UBERON:0002780;5.48e-48;41!UBERON:0001890;5.48e-48;41!UBERON:0000955;8.21e-38;68!UBERON:0001017;3.05e-36;75!UBERON:0001016;7.53e-31;83!UBERON:0004733;5.02e-23;12!UBERON:0002028;5.02e-23;12!UBERON:0000200;1.27e-22;6!UBERON:0004732;3.97e-21;13!UBERON:0002298;5.11e-21;6!UBERON:0002021;7.60e-20;5!UBERON:0001871;3.57e-19;6!UBERON:0001872;7.89e-19;5!UBERON:0000349;1.99e-18;5!UBERON:0002680;2.08e-14;9!UBERON:0001895;2.08e-14;9!UBERON:0002420;8.34e-14;9!UBERON:0007245;8.34e-14;9!UBERON:0010009;8.34e-14;9!UBERON:0010011;8.34e-14;9!UBERON:0000454;8.34e-14;9!UBERON:0011216;1.15e-13;132!UBERON:0000125;1.97e-13;9!UBERON:0002308;1.97e-13;9!UBERON:0001870;2.09e-12;3!UBERON:0007023;2.54e-12;114!UBERON:0000988;1.07e-11;3!UBERON:0001896;4.64e-11;3!UBERON:0005290;4.64e-11;3!UBERON:0002702;8.91e-09;2!UBERON:0001876;1.64e-08;2!UBERON:0000369;1.70e-08;4!UBERON:0002435;1.70e-08;4!UBERON:0000204;1.70e-08;4!UBERON:0002771;2.33e-08;2!UBERON:0001954;3.02e-08;2!UBERON:0003022;3.02e-08;2!UBERON:0002421;3.02e-08;2!UBERON:0002600;3.02e-08;2!UBERON:0009663;3.59e-08;7!UBERON:0002148;6.39e-08;2!UBERON:0006331;6.39e-08;2!UBERON:0009662;6.39e-08;2!UBERON:0010314;3.88e-07;132!UBERON:0000013;6.86e-07;5!UBERON:0002410;6.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.01e-96,56;UBERON:0005068,9.01e-96,56;UBERON:0006241,9.01e-96,56;UBERON:0007135,9.01e-96,56;UBERON:0001016,2.17e-95,89;UBERON:0001017,5.43e-94,81;UBERON:0000073,1.61e-91,53;UBERON:0002616,1.61e-91,53;UBERON:0000955,5.29e-81,68;UBERON:0006238,5.29e-81,68;UBERON:0003528,1.97e-77,34;UBERON:0002020,1.97e-77,34;UBERON:0001869,3.18e-77,32;UBERON:0002619,1.42e-75,22;UBERON:0001893,2.08e-72,34;UBERON:0002791,4.11e-71,32;UBERON:0001950,9.00e-69,20;UBERON:0002780,1.15e-68,41;UBERON:0001890,1.15e-68,41;UBERON:0003080,1.15e-68,41;UBERON:0006240,1.15e-68,41;UBERON:0000956,3.52e-66,25;UBERON:0000203,3.52e-66,25;UBERON:0003075,8.23e-63,82;UBERON:0007284,8.23e-63,82;UBERON:0002346,1.73e-59,86;UBERON:0010371,1.15e-47,104;UBERON:0004121,1.76e-45,171;UBERON:0000924,1.76e-45,171;UBERON:0006601,1.76e-45,171;UBERON:0003056,4.27e-44,61;UBERON:0007023,9.71e-41,114;UBERON:0010314,7.93e-38,132;UBERON:0011216,1.42e-37,223;UBERON:0003076,9.08e-27,15;UBERON:0003057,9.08e-27,15;UBERON:0004733,5.67e-23,12;UBERON:0002028,5.67e-23,12;UBERON:0007277,5.67e-23,12;UBERON:0000200,1.09e-22,6;UBERON:0000025,1.27e-21,192;UBERON:0004732,4.44e-21,13;UBERON:0002298,5.21e-21,6;UBERON:0002021,7.76e-20,5;UBERON:0001871,2.95e-19,6;UBERON:0001872,6.68e-19,5;UBERON:0000349,1.51e-18,5;UBERON:0004111,1.86e-15,240;UBERON:0002680,2.19e-14,9;UBERON:0001895,2.19e-14,9;UBERON:0010092,2.19e-14,9;UBERON:0002420,8.86e-14,9;UBERON:0007245,8.86e-14,9;UBERON:0010009,8.86e-14,9;UBERON:0010011,8.86e-14,9;UBERON:0000454,8.86e-14,9;UBERON:0000125,2.00e-13,9;UBERON:0002308,2.00e-13,9;UBERON:0001870,2.48e-12,3;UBERON:0000988,9.92e-12,3;UBERON:0001896,5.08e-11,3;UBERON:0005290,5.08e-11,3;UBERON:0010096,5.08e-11,3;UBERON:0000483,3.69e-10,306;UBERON:0000119,5.66e-10,309;UBERON:0002702,9.81e-09,2;UBERON:0001876,1.55e-08,2;UBERON:0000369,1.65e-08,4;UBERON:0002435,1.65e-08,4;UBERON:0000204,1.65e-08,4;UBERON:0010082,1.65e-08,4;UBERON:0000923,1.72e-08,560;UBERON:0010316,1.72e-08,560;UBERON:0005291,1.72e-08,560;UBERON:0006598,1.72e-08,560;UBERON:0010317,1.72e-08,560;UBERON:0002532,1.72e-08,560;UBERON:0002771,2.09e-08,2;UBERON:0002050,2.37e-08,564;UBERON:0001954,2.42e-08,2;UBERON:0003022,2.42e-08,2;UBERON:0002421,2.42e-08,2;UBERON:0002600,2.42e-08,2;UBERON:0009663,3.89e-08,7;UBERON:0002148,5.63e-08,2;UBERON:0006331,5.63e-08,2;UBERON:0009662,5.63e-08,2;UBERON:0005423,8.89e-08,581;UBERON:0000922,2.01e-07,592;UBERON:0000013,6.44e-07,5;UBERON:0002410,6.44e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,6.50699269288109,1.54657762555539,5.02548796003046,4.46557126157214,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,1.68803299692615,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,6.49376687132959,5.98841394003583,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0.885741385813839,1.5677537021303,4.5774520895125,4.20201187738654,5.02430952221031,4.60709334023342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,3.51396668588009,0,0,0,0,0,6.73360075587078,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,6.39439039154375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56660782866512,1.90684768556206,0,0,0,0,0,6.25720433577654,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,1.85125642439766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74674997963685,6.46739203980405,3.004582336956,1.72022758707021,1.22021956690538,3.47739856471747,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79052119825112,3.23474434190045,0,2.18419276384028,0,0,0,0,0,0,0.80057074828547,0,0,4.56027498184863,8.5017945795351,2.07524016774297,8.82000366235247,7.05800749420811,7.3306687612071,5.81312324274664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36159672340502,4.68646859168308,3.10030194751776,6.72207588055412,4.37579847214576,0,0,0,0,0,0,0.606965604236632,0,0,0,0,8.42824688912713,5.98532239421927,0,0,0,1.72827148907602,0,4.56579360254748,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,1.17785080268967,0.297046400327086,2.9585900930838,0,0,0,0,0,0,0,0,0,0.430018749454354,0.157771562193185,7.00312348966421,5.23620828408453,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RTN1 | |||
}} |
Latest revision as of 19:52, 24 September 2015
Short description: | p6@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RTN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 44bp_to_ENST00000395090_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | A8MT72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.29e-07 | 8 |