FFCP PHASE1:Hg19::chr14:60097524..60097538,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3B9,Q16799 | |||
|association_with_transcript=0bp_to_ENST00000342503,NM_206852_5end | |||
|cluster_id=chr14:60097524..60097538,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_RTN1_5end | |||
|id=chr14:60097524..60097538,- | |||
|ontology_enrichment_celltype=CL:0002319!4.28e-10!25;CL:0000047!5.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.89e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.02e-11,25;CL:0000047,1.10e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.65e-23;82!UBERON:0006215;2.51e-08;3!UBERON:0006241;4.25e-07;3!UBERON:0003057;4.25e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.36e-82!94;UBERON:0001016!5.36e-82!94;UBERON:0005743!5.37e-82!86;UBERON:0001017!7.81e-80!82;UBERON:0001049!1.62e-74!57;UBERON:0005068!1.62e-74!57;UBERON:0006241!1.62e-74!57;UBERON:0007135!1.62e-74!57;UBERON:0000955!6.54e-67!69;UBERON:0006238!6.54e-67!69;UBERON:0002616!1.80e-65!59;UBERON:0003075!7.93e-60!86;UBERON:0007284!7.93e-60!86;UBERON:0002780!1.10e-58!41;UBERON:0001890!1.10e-58!41;UBERON:0006240!1.10e-58!41;UBERON:0003080!5.91e-57!42;UBERON:0002346!3.26e-56!90;UBERON:0001893!2.89e-50!34;UBERON:0002020!3.12e-50!34;UBERON:0003528!3.12e-50!34;UBERON:0002791!1.01e-48!33;UBERON:0001869!6.73e-48!32;UBERON:0004121!4.86e-46!169;UBERON:0007023!4.07e-45!115;UBERON:0000924!2.26e-44!173;UBERON:0006601!2.26e-44!173;UBERON:0003056!6.26e-44!61;UBERON:0000033!2.64e-39!123;UBERON:0000956!1.26e-38!25;UBERON:0000203!1.26e-38!25;UBERON:0000153!1.74e-36!129;UBERON:0007811!1.74e-36!129;UBERON:0002619!3.07e-35!22;UBERON:0001950!1.44e-32!20;UBERON:0000025!6.21e-19!194;UBERON:0003076!7.69e-18!15;UBERON:0003057!7.69e-18!15;UBERON:0004732!1.71e-15!13;UBERON:0004733!3.23e-14!12;UBERON:0002028!3.23e-14!12;UBERON:0007277!3.23e-14!12;UBERON:0004111!1.07e-13!241;UBERON:0000064!1.50e-13!219;UBERON:0002420!4.33e-13!9;UBERON:0007245!4.33e-13!9;UBERON:0010009!4.33e-13!9;UBERON:0010011!4.33e-13!9;UBERON:0000454!4.33e-13!9;UBERON:0001871!4.33e-13!7;UBERON:0002308!7.54e-13!9;UBERON:0000125!7.54e-13!9;UBERON:0000483!2.91e-12!309;UBERON:0000119!6.20e-12!312;UBERON:0000922!1.89e-11!612;UBERON:0000475!3.62e-11!365;UBERON:0002680!1.67e-10!9;UBERON:0001895!1.67e-10!9;UBERON:0010092!1.67e-10!9;UBERON:0000200!1.87e-10!6;UBERON:0009663!3.30e-10!7;UBERON:0000477!4.13e-10!286;UBERON:0000481!5.98e-10!347;UBERON:0002050!6.86e-10!605;UBERON:0005423!6.86e-10!605;UBERON:0001894!1.22e-09!7;UBERON:0006222!1.22e-09!7;UBERON:0000923!1.80e-09!604;UBERON:0005291!1.80e-09!604;UBERON:0006598!1.80e-09!604;UBERON:0002532!1.80e-09!604;UBERON:0002021!4.21e-09!5;UBERON:0001872!4.79e-09!5;UBERON:0002298!5.78e-09!8;UBERON:0000349!1.33e-08!5;UBERON:0000468!3.25e-08!659;UBERON:0000467!1.05e-07!625;UBERON:0000480!1.22e-07!626;UBERON:0000062!1.41e-07!511;UBERON:0000369!6.20e-07!4;UBERON:0002435!6.20e-07!4;UBERON:0000204!6.20e-07!4;UBERON:0010082!6.20e-07!4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,1.47745269692145,0,0.626909442956176,5.43848375549008,1.09499540058307,2.25976751270645,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67993285038334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.348581828608555,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,35.5732473911449,55.9601371587773,21.6520867577755,53.9402374376603,29.9831213276987,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.6137447525757,18.7090323825982,0,0,0.211125408127993,22.7142706606219,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,67.8532922266653,39.890282209596,131.745106680788,0,0,0,0,0,0,3.44743373241465,0,11.285624670664,13.2861207872076,7.83876851065152,54.92942507415,24.2168579249382,51.4252856979173,43.6576940336405,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,4.27721101453538,0,0,0,5.79649743633823,0,8.66778449183755,0,0,0,0,2.41981432097328,117.531940466108,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,6.32746074185491,0,0,50.5220151727912,0,0.961905843018405,0,0,0,0,0.171594997861965,0,0,0,1.9026588850306,1.04602846312333,0,0,3.60252173225874,1.23214841002794,0,0,0,0.279282401272254,3.89572720819862,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,23.8568906942791,9.26183161558714,0,0.275078873194468,0,0.674921674654501,0,54.5531018789061,0,0,0.0524545881349981,0,3.22717210799121,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2179481377104,8.19842130804678,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,53.1640907980192,51.1290049939226,30.9221598845055,6.30750115259078,7.54317550450596,11.6741237529801,0.138348634936231,0,0,0,0,5.1516839638757,2.02889440055155,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3334847627046,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,14.5799583286163,24.7997066212368,0,14.6340915177299,0,0,0,0,0,0,10.4074197277111,0,0,35.1976153528598,43.9259386609313,17.5597244962866,70.5600292988197,115.95298026199,48.9633347446663,34.8787394564798,11.4215536207324,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,49.2348991868097,43.7403735223755,25.835849562648,41.537355677009,87.5159694429151,0,0.992422356778588,0,0,2.14280734351315,0.336283722218824,4.24875922965642,3.87025725297206,0,0,0,20.7987382909105,51.3027633790223,0,0,0,13.0405939630282,0,11.8710633666234,0,0,1.28657779517981,0,0,0,0,0.207216164163037,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,1.16969731731053,0,1.07028081699812,0,0,0.905777061400041,0.308696632431779,4.15263164957519,0,0,0,5.88925401344836,3.56455680392503,10.9890489171684,0,0,0,0,0,0,0,0,0,1.43339583151451,2.83988811947732,56.9088772897956,110.396724656115,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,11.6083721524229,2.89612388413307,0,0,0,0,0,0,0,0,0,0,0.358611026963382,1.33064142618405,0,0,0,0,0,0,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p3@RTN1 | |||
}} |
Latest revision as of 19:56, 24 September 2015
Short description: | p3@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RTN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000342503, NM_206852_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | A8K3B9Q16799 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.02e-11 | 25 |
neuronal stem cell | 1.10e-07 | 8 |