FFCP PHASE1:Hg19::chr8:102504979..102505010,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:102504979..102505010,+ to FFCP PHASE1:Hg19::chr8:102504979..102505010,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79977 | |EntrezGene=79977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2799 | |HGNC=2799 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000395927_5end | |||
|cluster_id=chr8:102504979..102505010,+ | |||
|coexpression_cluster_id=C1541 | |||
|description=CAGE_peak_2_at_GRHL2_5end | |||
|id=chr8:102504979..102505010,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.51e-17!43;CL:0000066!8.36e-16!254;CL:0000223!1.94e-12!59;CL:0002251!7.39e-09!21;CL:0002368!3.07e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.16e-15;42!CL:0002251;1.63e-11;20!CL:0000349;9.16e-11;19!CL:0002577;6.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.02e-19,42;CL:0000066,2.94e-17,253;CL:0000223,1.12e-14,58;CL:0002251,1.62e-11,20;CL:0000349,9.55e-11,19;CL:0002577,6.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.04e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!5.33e-15!14;DOID:305!2.16e-13!106;DOID:0050687!3.45e-09!143;DOID:299!3.58e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.94e-20;14!DOID:299;3.15e-10;25!DOID:5093;2.28e-08;4!DOID:1612;2.28e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.06e-20,14;DOID:305,1.01e-16,106;DOID:0050687,1.17e-11,143;DOID:299,3.49e-10,25;DOID:5093,2.20e-08,4;DOID:1612,2.20e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.40e-24!169;UBERON:0000925!5.40e-24!169;UBERON:0006595!5.40e-24!169;UBERON:0001007!8.57e-17!155;UBERON:0001555!8.57e-17!155;UBERON:0007026!8.57e-17!155;UBERON:0005631!5.59e-14!14;UBERON:0000158!5.59e-14!14;UBERON:0000077!1.29e-13!130;UBERON:0004921!1.82e-13!129;UBERON:0004185!1.82e-13!129;UBERON:0001004!9.58e-13!72;UBERON:0000161!1.25e-10!35;UBERON:0003124!1.79e-10!7;UBERON:0005911!4.12e-10!82;UBERON:0005156!4.88e-10!59;UBERON:0000990!4.88e-10!59;UBERON:0000464!9.29e-10!104;UBERON:0000344!1.41e-09!12;UBERON:0000065!4.88e-09!53;UBERON:0003133!6.03e-09!48;UBERON:0004175!7.38e-09!25;UBERON:0005178!2.83e-08!34;UBERON:0002224!2.83e-08!34;UBERON:0005181!6.91e-08!35;UBERON:0000478!7.14e-08!24;UBERON:0000466!7.64e-08!126;UBERON:0000166!8.84e-08!21;UBERON:0000915!1.87e-07!52;UBERON:0003729!1.98e-07!5;UBERON:0005153!3.87e-07!37;UBERON:0003101!5.10e-07!22;UBERON:0000079!5.10e-07!22;UBERON:0000974!5.56e-07!10;UBERON:0001987!8.24e-07!4;UBERON:0004340!8.24e-07!4;UBERON:0001041!8.94e-07!98;UBERON:0003135!9.97e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.98e-12;10!UBERON:0000158;3.98e-12;10!UBERON:0000478;2.03e-11;24!UBERON:0000974;8.53e-11;6!UBERON:0000344;8.86e-10;20!UBERON:0001987;9.99e-09;4!UBERON:0005911;1.00e-08;36!UBERON:0000161;1.06e-08;19!UBERON:0000166;1.06e-08;19!UBERON:0000165;1.13e-08;28!UBERON:0000058;2.17e-08;10!UBERON:0003343;2.30e-08;4!UBERON:0004785;2.30e-08;4!UBERON:0000365;3.29e-08;5!UBERON:0005178;1.45e-07;34!UBERON:0002224;1.45e-07;34!UBERON:0000305;2.14e-07;7!UBERON:0003729;3.39e-07;13!UBERON:0000486;3.94e-07;12!UBERON:0001004;6.19e-07;65!UBERON:0004807;7.94e-07;22!UBERON:0005910;9.17e-07;6!UBERON:0005181;9.99e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.13e-22,160;UBERON:0000925,8.13e-22,160;UBERON:0006595,8.13e-22,160;UBERON:0005631,6.56e-19,14;UBERON:0000158,6.56e-19,14;UBERON:0001007,4.00e-15,145;UBERON:0001555,4.00e-15,145;UBERON:0007026,4.00e-15,145;UBERON:0000161,7.05e-15,36;UBERON:0003124,9.89e-14,7;UBERON:0001004,3.50e-12,74;UBERON:0004921,7.75e-12,118;UBERON:0000478,2.13e-11,24;UBERON:0004175,3.04e-11,25;UBERON:0005911,1.91e-10,82;UBERON:0000166,2.46e-10,22;UBERON:0000344,7.90e-10,20;UBERON:0004923,1.24e-09,66;UBERON:0001987,9.73e-09,4;UBERON:0004340,9.73e-09,4;UBERON:0005178,1.17e-08,34;UBERON:0002224,1.17e-08,34;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0003343,2.46e-08,4;UBERON:0004785,2.46e-08,4;UBERON:0005181,2.68e-08,35;UBERON:0000165,2.72e-08,29;UBERON:0000930,2.72e-08,29;UBERON:0000365,3.30e-08,5;UBERON:0003102,4.25e-08,99;UBERON:0000915,4.98e-08,52;UBERON:0001008,6.73e-08,48;UBERON:0003975,9.70e-08,22;UBERON:0005153,1.38e-07,37;UBERON:0001041,1.65e-07,87;UBERON:0000305,2.20e-07,7;UBERON:0003729,2.85e-07,13;UBERON:0000065,3.06e-07,54;UBERON:0006554,3.10e-07,47;UBERON:0005157,5.89e-07,47;UBERON:0000995,7.07e-07,21;UBERON:0005910,9.18e-07,6 | |||
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| ||
|short_description=p2@GRHL2 | |||
}} | }} |
Latest revision as of 21:39, 24 September 2015
Short description: | p2@GRHL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRHL2_5end |
Coexpression cluster: | C1541_amniotic_Amniotic_MCF7_Placental_chorionic_oral_acantholytic |
Association with transcript: | 0bp_to_ENST00000395927_5end |
EntrezGene: | GRHL2 |
HGNC: | 2799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.02e-19 | 42 |
epithelial cell | 2.94e-17 | 253 |
endodermal cell | 1.12e-14 | 58 |
epithelial cell of alimentary canal | 1.62e-11 | 20 |
extraembryonic cell | 9.55e-11 | 19 |
placental epithelial cell | 6.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.06e-20 | 14 |
carcinoma | 1.01e-16 | 106 |
cell type cancer | 1.17e-11 | 143 |
adenocarcinoma | 3.49e-10 | 25 |
thoracic cancer | 2.20e-08 | 4 |
breast cancer | 2.20e-08 | 4 |