FFCP PHASE1:Hg19::chr12:78359999..78360035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89795 | |EntrezGene=89795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |HGNC=15998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000547725,ENST00000550503_5end | |association_with_transcript=-20bp_to_ENST00000547725,ENST00000550503_5end | ||
|cluster_id=chr12:78359999..78360035,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_13_at_NAV3_5end | |description=CAGE_peak_13_at_NAV3_5end | ||
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|ontology_enrichment_celltype=CL:0002586!2.45e-07!3 | |ontology_enrichment_celltype=CL:0002586!2.45e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002586;5.17e-25;3!CL:0002174;1.08e-19;1!CL:0000501;1.08e-19;1!CL:0000149;4.92e-19;4!CL:0000047;2.72e-10;2!CL:0000174;1.93e-07;3 | |ontology_enrichment_celltype_v019=CL:0002586;5.17e-25;3!CL:0002174;1.08e-19;1!CL:0000501;1.08e-19;1!CL:0000149;4.92e-19;4!CL:0000047;2.72e-10;2!CL:0000174;1.93e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.02e-25,3;CL:0002174,1.08e-19,1;CL:0000501,1.08e-19,1;CL:0000149,6.18e-19,4;CL:0000174,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.81e-25;3!UBERON:0005425;3.25e-19;1!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |ontology_enrichment_development_v019=UBERON:0003056;3.81e-25;3!UBERON:0005425;3.25e-19;1!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000966;2.93e-33;5!UBERON:0005388;2.93e-33;5!UBERON:0001802;2.93e-33;5!UBERON:0001781;5.17e-25;3!UBERON:0001782;5.17e-25;3!UBERON:0002104;1.17e-21;21!UBERON:0007029;3.25e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0001032;5.63e-19;24!UBERON:0004456;5.63e-19;24!UBERON:0000970;6.42e-15;20!UBERON:0000020;5.07e-13;23!UBERON:0003714;2.72e-10;2!UBERON:0001875;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0000019;2.93e-09;19!UBERON:0000047;2.93e-09;19!UBERON:0004088;2.93e-09;19!UBERON:0010230;2.93e-09;19!UBERON:0001456;1.97e-08;21!UBERON:0007625;1.59e-07;11!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000966;2.93e-33;5!UBERON:0005388;2.93e-33;5!UBERON:0001802;2.93e-33;5!UBERON:0001781;5.17e-25;3!UBERON:0001782;5.17e-25;3!UBERON:0002104;1.17e-21;21!UBERON:0007029;3.25e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0001032;5.63e-19;24!UBERON:0004456;5.63e-19;24!UBERON:0000970;6.42e-15;20!UBERON:0000020;5.07e-13;23!UBERON:0003714;2.72e-10;2!UBERON:0001875;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0000019;2.93e-09;19!UBERON:0000047;2.93e-09;19!UBERON:0004088;2.93e-09;19!UBERON:0010230;2.93e-09;19!UBERON:0001456;1.97e-08;21!UBERON:0007625;1.59e-07;11!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.88e-48,6;UBERON:0005388,2.88e-48,6;UBERON:0001802,2.88e-48,6;UBERON:0001781,7.56e-41,4;UBERON:0001782,7.02e-25,3;UBERON:0005424,7.02e-25,3;UBERON:0000970,1.27e-21,21;UBERON:0002104,1.27e-21,21;UBERON:0007029,2.25e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0000020,6.07e-19,24;UBERON:0001032,6.07e-19,24;UBERON:0004456,6.07e-19,24;UBERON:0000019,7.97e-15,20;UBERON:0000047,7.97e-15,20;UBERON:0010312,7.97e-15,20;UBERON:0004088,7.97e-15,20;UBERON:0010230,7.97e-15,20;UBERON:0003072,7.97e-15,20;UBERON:0004128,7.97e-15,20;UBERON:0003071,7.97e-15,20;UBERON:0001456,1.64e-13,22;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0001875,3.27e-10,2;UBERON:0006514,3.27e-10,2;UBERON:0005085,1.10e-09,31;UBERON:0010371,4.54e-08,104;UBERON:0003075,1.17e-07,82;UBERON:0007284,1.17e-07,82;UBERON:0007625,1.73e-07,11;UBERON:0003056,2.42e-07,61;UBERON:0002346,2.70e-07,86;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3 | |||
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|short_description=p13@NAV3 | |short_description=p13@NAV3 | ||
}} | }} |
Latest revision as of 22:43, 24 September 2015
Short description: | p13@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NAV3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -20bp_to_ENST00000547725, ENST00000550503_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.02e-25 | 3 |
follicular cell of ovary | 1.08e-19 | 1 |
granulosa cell | 1.08e-19 | 1 |
visual pigment cell | 6.18e-19 | 4 |
steroid hormone secreting cell | 1.93e-07 | 3 |