FFCP PHASE1:Hg19::chr14:62037147..62037173,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400221 | |EntrezGene=400221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V2X1 | |UniProt=G3V2X1 | ||
|association_with_transcript=-84bp_to_ENST00000229465,NR_039985,uc001xfp.2_5end | |association_with_transcript=-84bp_to_ENST00000229465,NR_039985,uc001xfp.2_5end | ||
|cluster_id=chr14:62037147..62037173,+ | |||
|coexpression_cluster_id=C1728 | |||
|description=CAGE_peak_2_at_FLJ22447_5end | |description=CAGE_peak_2_at_FLJ22447_5end | ||
|id=chr14:62037147..62037173,+ | |id=chr14:62037147..62037173,+ | ||
|ontology_enrichment_celltype=CL:0000680!6.02e-09!57;CL:0000056!6.02e-09!57;CL:0000355!6.02e-09!57;CL:0000187!4.02e-07!54;CL:0000055!4.03e-07!180;CL:0000548!6.26e-07!679;CL:0000004!6.26e-07!679;CL:0000255!6.26e-07!679 | |ontology_enrichment_celltype=CL:0000680!6.02e-09!57;CL:0000056!6.02e-09!57;CL:0000355!6.02e-09!57;CL:0000187!4.02e-07!54;CL:0000055!4.03e-07!180;CL:0000548!6.26e-07!679;CL:0000004!6.26e-07!679;CL:0000255!6.26e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.72e-15;3!CL:0000067;5.72e-15;3!CL:0005012;5.72e-15;3!CL:0002304;5.72e-15;3!CL:0000306;6.96e-11;4!CL:0002222;6.96e-11;4!CL:0002224;6.96e-11;4!CL:0000056;3.41e-10;4!CL:0000075;1.52e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.87e-15,3;CL:0000067,5.87e-15,3;CL:0005012,5.87e-15,3;CL:0002304,5.87e-15,3;CL:0000306,7.84e-11,4;CL:0002222,7.84e-11,4;CL:0002224,7.84e-11,4;CL:0000515,2.47e-10,4;CL:0000075,1.59e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000515;3.41e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.79e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001134!7.52e-08!61;UBERON:0002036!7.52e-08!61;UBERON:0003082!7.52e-08!61;UBERON:0002385!2.31e-07!63;UBERON:0001015!2.31e-07!63;UBERON:0000383!2.31e-07!63;UBERON:0001637!5.75e-07!42;UBERON:0003509!5.75e-07!42;UBERON:0004572!5.75e-07!42;UBERON:0000488!6.84e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;4.87e-20;11!UBERON:0000488;1.80e-19;4!UBERON:0001801;1.58e-15;14!UBERON:0001778;5.72e-15;3!UBERON:0001775;5.72e-15;3!UBERON:0002203;5.25e-13;6!UBERON:0001768;5.25e-13;6!UBERON:0002200;5.25e-13;6!UBERON:0000019;3.60e-11;19!UBERON:0000047;3.60e-11;19!UBERON:0004088;3.60e-11;19!UBERON:0010230;3.60e-11;19!UBERON:0002394;6.62e-11;4!UBERON:0003928;6.62e-11;4!UBERON:0010077;6.96e-11;4!UBERON:0005389;6.96e-11;4!UBERON:0000484;6.96e-11;4!UBERON:0000965;6.96e-11;4!UBERON:0001803;6.96e-11;4!UBERON:0000970;1.46e-10;20!UBERON:0010371;4.60e-10;31!UBERON:0002104;5.22e-10;21!UBERON:0001456;5.22e-10;21!UBERON:0000020;4.75e-09;23!UBERON:0001032;1.25e-08;24!UBERON:0004456;1.25e-08;24!UBERON:0006876;4.28e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.47e-20,11;UBERON:0000488,1.84e-19,4;UBERON:0001801,1.73e-15,14;UBERON:0001778,5.87e-15,3;UBERON:0001775,5.87e-15,3;UBERON:0002203,5.34e-13,6;UBERON:0001768,5.34e-13,6;UBERON:0002200,5.34e-13,6;UBERON:0010077,7.84e-11,4;UBERON:0005389,7.84e-11,4;UBERON:0000484,7.84e-11,4;UBERON:0002546,7.84e-11,4;UBERON:0000965,7.84e-11,4;UBERON:0001803,7.84e-11,4;UBERON:0003073,7.84e-11,4;UBERON:0005426,7.84e-11,4;UBERON:0000019,1.56e-10,20;UBERON:0000047,1.56e-10,20;UBERON:0010312,1.56e-10,20;UBERON:0004088,1.56e-10,20;UBERON:0010230,1.56e-10,20;UBERON:0003072,1.56e-10,20;UBERON:0004128,1.56e-10,20;UBERON:0003071,1.56e-10,20;UBERON:0000970,5.53e-10,21;UBERON:0002104,5.53e-10,21;UBERON:0001456,1.75e-09,22;UBERON:0000020,1.31e-08,24;UBERON:0001032,1.31e-08,24;UBERON:0004456,1.31e-08,24;UBERON:0005085,2.79e-08,31;UBERON:0002394,2.05e-07,6;UBERON:0003928,2.05e-07,6;UBERON:0006876,4.32e-07,11 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,1.46062018077475,0,0.369363174230364,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0,0.50133791063589,0,0,0,8.03545945894577,9.09090529596512,16.0737657818421,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.662045904066094,1.14734648299525,0.709336764396714,0.560677600142307,0,0.98667019366864,0,3.77189881795127,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,1.24775401476023,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,22.8185187697039,0,0,0,0,0,0,21.649701303791,1.15930404975077,6.57488687720601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.771622122786426,0,0.532844358032199,0.57191197463259,0,0.823240336780769,0,0.355391948742546,3.16780749173372,0,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,0.410952645100767,2.50685348535854,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0.831883446123229,0.713715955188647,0,0.702848489956279,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,3.32870879020994,0.30239029332968,0.496215615637554,0.920771839728375,0,1.15325234330131,0,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0.770243085573222,0.921022048356777,0,0.107420244868274,0,0.170453254832202,0.267096106940212,0,0.384380134730212,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,1.59691809095107,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,1.32687795048244,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51631383212515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.307801034015188,5.69710279235006,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,8.86191871017714,3.26465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,1.13843818411917,0.138674673013139,0,0,0.783532859223623,0.34945333648406,0,5.80537987734511,5.99332400106722,5.09115833729897,0,0,0,2.46675464364152,0,0,0,0.64127056201227,0,0,0,0,0,0.576219191952599,0,0.235694034616795,0.271808412147228,0,0,0.288950589901519,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,3.06698439213759,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49960815924213,0,0,14.1159491818903,0,0,0.298509605773748,0.701139929541673,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.228840068396924,0.302461847526478,0.621748802331122,1.03498604992744,0.159296767163702,0,0.621051827505038,0,0,0.521745061811734,0,0,0.813741466409323,0.181848659202559,1.50374779859484,0,0.398095888698616,11.2007774105683,0,0.336749488765919,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0,0,0,2.41212454536578,0,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,2.21195617878347,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,13.3125345344323,0,0,0,6.35781170733295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0.111231401892069,0,0,0,0,1.07963795609311,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,1.24082554265728,0,0,0.687051635306701,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.976839223331694,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,1.46062018077475,0,0.369363174230364,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0,0.50133791063589,0,0,0,8.03545945894577,9.09090529596512,16.0737657818421,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.662045904066094,1.14734648299525,0.709336764396714,0.560677600142307,0,0.98667019366864,0,3.77189881795127,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,1.24775401476023,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,22.8185187697039,0,0,0,0,0,0,21.649701303791,1.15930404975077,6.57488687720601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.771622122786426,0,0.532844358032199,0.57191197463259,0,0.823240336780769,0,0.355391948742546,3.16780749173372,0,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,0.410952645100767,2.50685348535854,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0.831883446123229,0.713715955188647,0,0.702848489956279,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,3.32870879020994,0.30239029332968,0.496215615637554,0.920771839728375,0,1.15325234330131,0,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0.770243085573222,0.921022048356777,0,0.107420244868274,0,0.170453254832202,0.267096106940212,0,0.384380134730212,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,1.59691809095107,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,1.32687795048244,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51631383212515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.307801034015188,5.69710279235006,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,8.86191871017714,3.26465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,1.13843818411917,0.138674673013139,0,0,0.783532859223623,0.34945333648406,0,5.80537987734511,5.99332400106722,5.09115833729897,0,0,0,2.46675464364152,0,0,0,0.64127056201227,0,0,0,0,0,0.576219191952599,0,0.235694034616795,0.271808412147228,0,0,0.288950589901519,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,3.06698439213759,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49960815924213,0,0,14.1159491818903,0,0,0.298509605773748,0.701139929541673,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.228840068396924,0.302461847526478,0.621748802331122,1.03498604992744,0.159296767163702,0,0.621051827505038,0,0,0.521745061811734,0,0,0.813741466409323,0.181848659202559,1.50374779859484,0,0.398095888698616,11.2007774105683,0,0.336749488765919,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0,0,0,2.41212454536578,0,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,2.21195617878347,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,13.3125345344323,0,0,0,6.35781170733295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0.111231401892069,0,0,0,0,1.07963795609311,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,1.24082554265728,0,0,0.687051635306701,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.976839223331694,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@FLJ22447 | |short_description=p2@FLJ22447 | ||
}} | }} |
Latest revision as of 23:08, 24 September 2015
Short description: | p2@FLJ22447 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FLJ22447_5end |
Coexpression cluster: | C1728_mesenchymal_pagetoid_Ciliary_Iris_papillotubular_meningioma_Myoblast |
Association with transcript: | -84bp_to_ENST00000229465, NR_039985, uc001xfp.2_5end |
EntrezGene: | FLJ22447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.87e-15 | 3 |
ciliated epithelial cell | 5.87e-15 | 3 |
multi-ciliated epithelial cell | 5.87e-15 | 3 |
non-pigmented ciliary epithelial cell | 5.87e-15 | 3 |
crystallin accumulating cell | 7.84e-11 | 4 |
vertebrate lens cell | 7.84e-11 | 4 |
lens epithelial cell | 7.84e-11 | 4 |
skeletal muscle myoblast | 2.47e-10 | 4 |
columnar/cuboidal epithelial cell | 1.59e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 5.47e-20 | 11 |
atypical epithelium | 1.84e-19 | 4 |
anterior segment of eyeball | 1.73e-15 | 14 |
ciliary epithelium | 5.87e-15 | 3 |
ciliary body | 5.87e-15 | 3 |
vasculature of eye | 5.34e-13 | 6 |
uvea | 5.34e-13 | 6 |
vasculature of head | 5.34e-13 | 6 |
cuboidal epithelium | 7.84e-11 | 4 |
transparent eye structure | 7.84e-11 | 4 |
simple cuboidal epithelium | 7.84e-11 | 4 |
cranial placode | 7.84e-11 | 4 |
lens of camera-type eye | 7.84e-11 | 4 |
epithelium of lens | 7.84e-11 | 4 |
lens placode | 7.84e-11 | 4 |
lens vesicle | 7.84e-11 | 4 |
camera-type eye | 1.56e-10 | 20 |
simple eye | 1.56e-10 | 20 |
immature eye | 1.56e-10 | 20 |
ocular region | 1.56e-10 | 20 |
eyeball of camera-type eye | 1.56e-10 | 20 |
optic cup | 1.56e-10 | 20 |
optic vesicle | 1.56e-10 | 20 |
eye primordium | 1.56e-10 | 20 |
eye | 5.53e-10 | 21 |
visual system | 5.53e-10 | 21 |
face | 1.75e-09 | 22 |
sense organ | 1.31e-08 | 24 |
sensory system | 1.31e-08 | 24 |
entire sense organ system | 1.31e-08 | 24 |
ectodermal placode | 2.79e-08 | 31 |
bile duct | 2.05e-07 | 6 |
digestive system duct | 2.05e-07 | 6 |
vasculature of organ | 4.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.79e-10 | 2 |