FFCP PHASE1:Hg19::chr11:8932715..8932762,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1170 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNI1,B4DGE2,E9PN38 | |||
|association_with_transcript=0bp_to_ENST00000524577,ENST00000525005,ENST00000529876,ENST00000534506,NR_045417,NR_045418_5end | |||
|cluster_id=chr11:8932715..8932762,+ | |||
|description=CAGE_peak_1_at_AKIP1_5end | |||
|id=chr11:8932715..8932762,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.29e-19!180;CL:0000220!5.28e-18!246;CL:0000548!1.27e-17!679;CL:0000004!1.27e-17!679;CL:0000255!1.27e-17!679;CL:0002321!1.80e-17!248;CL:0000222!8.70e-17!119;CL:0000012!1.57e-16!682;CL:0000066!5.22e-14!254;CL:0002371!7.56e-13!591;CL:0000144!7.50e-12!625;CL:0000183!1.28e-11!59;CL:0000680!1.83e-10!57;CL:0000056!1.83e-10!57;CL:0000355!1.83e-10!57;CL:0000187!3.81e-10!54;CL:0000057!5.30e-10!75;CL:0000192!1.18e-09!42;CL:0000514!1.18e-09!42;CL:0000003!1.21e-08!722;CL:0000359!2.14e-07!32;CL:0000393!2.64e-07!60;CL:0000211!2.64e-07!60;CL:0000063!3.58e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.62e-07;43!CL:0000359;5.06e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.36e-18,250;CL:0000222,2.38e-17,121;CL:0000066,8.81e-14,253;CL:0000680,1.00e-10,58;CL:0000056,1.00e-10,58;CL:0000355,1.00e-10,58;CL:0000187,2.09e-10,55;CL:0000057,4.68e-10,76;CL:0000192,6.43e-10,43;CL:0000514,6.43e-10,43;CL:0000393,1.55e-07,61;CL:0000211,1.55e-07,61;CL:0000359,2.14e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.62e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.84e-15!143;UBERON:0002100!6.42e-13!216;UBERON:0003104!6.86e-13!238;UBERON:0009142!6.86e-13!238;UBERON:0000914!1.30e-12!83;UBERON:0002329!1.30e-12!83;UBERON:0003077!1.30e-12!83;UBERON:0003059!1.30e-12!83;UBERON:0007282!1.30e-12!83;UBERON:0009618!1.30e-12!83;UBERON:0007285!1.30e-12!83;UBERON:0000486!1.93e-12!82;UBERON:0004290!3.72e-11!70;UBERON:0000475!4.31e-10!365;UBERON:0001134!2.18e-09!61;UBERON:0002036!2.18e-09!61;UBERON:0003082!2.18e-09!61;UBERON:0002385!4.43e-09!63;UBERON:0001015!4.43e-09!63;UBERON:0000383!4.43e-09!63;UBERON:0003102!3.21e-08!95;UBERON:0000490!3.62e-08!138;UBERON:0000481!9.91e-08!347;UBERON:0000119!2.57e-07!312;UBERON:0000483!3.21e-07!309;UBERON:0001637!5.37e-07!42;UBERON:0003509!5.37e-07!42;UBERON:0004572!5.37e-07!42;UBERON:0003914!9.02e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.44e-13,78;UBERON:0000486,1.06e-12,83;UBERON:0005256,2.84e-12,122;UBERON:0003104,7.05e-12,160;UBERON:0009142,7.05e-12,160;UBERON:0002100,1.03e-11,199;UBERON:0002329,2.06e-11,71;UBERON:0003059,2.06e-11,71;UBERON:0007282,2.06e-11,71;UBERON:0004290,2.06e-11,71;UBERON:0009618,2.06e-11,71;UBERON:0003077,2.24e-11,72;UBERON:0007285,2.24e-11,72;UBERON:0007524,2.61e-11,73;UBERON:0000490,7.18e-10,148;UBERON:0001134,1.22e-09,62;UBERON:0002036,1.22e-09,62;UBERON:0003082,1.22e-09,62;UBERON:0003102,1.28e-09,99;UBERON:0002385,2.51e-09,64;UBERON:0001015,2.51e-09,64;UBERON:0000383,2.51e-09,64;UBERON:0000119,2.41e-07,309;UBERON:0000483,3.01e-07,306;UBERON:0001637,5.37e-07,42;UBERON:0003509,5.37e-07,42;UBERON:0004572,5.37e-07,42;UBERON:0002097,6.24e-07,41 | |||
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| |||
|short_description=p1@AKIP1 | |||
}} |
Latest revision as of 00:21, 25 September 2015
Short description: | p1@AKIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AKIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524577, ENST00000525005, ENST00000529876, ENST00000534506, NR_045417, NR_045418_5end |
EntrezGene: | AKIP1 |
HGNC: | 1170 |
UniProt: | E9PNI1B4DGE2E9PN38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.36e-18 | 250 |
mesodermal cell | 2.38e-17 | 121 |
epithelial cell | 8.81e-14 | 253 |
muscle precursor cell | 1.00e-10 | 58 |
myoblast | 1.00e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.00e-10 | 58 |
muscle cell | 2.09e-10 | 55 |
fibroblast | 4.68e-10 | 76 |
smooth muscle cell | 6.43e-10 | 43 |
smooth muscle myoblast | 6.43e-10 | 43 |
electrically responsive cell | 1.55e-07 | 61 |
electrically active cell | 1.55e-07 | 61 |
vascular associated smooth muscle cell | 2.14e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.44e-13 | 78 |
multilaminar epithelium | 1.06e-12 | 83 |
trunk mesenchyme | 2.84e-12 | 122 |
mesenchyme | 7.05e-12 | 160 |
entire embryonic mesenchyme | 7.05e-12 | 160 |
trunk | 1.03e-11 | 199 |
somite | 2.06e-11 | 71 |
presomitic mesoderm | 2.06e-11 | 71 |
presumptive segmental plate | 2.06e-11 | 71 |
dermomyotome | 2.06e-11 | 71 |
trunk paraxial mesoderm | 2.06e-11 | 71 |
paraxial mesoderm | 2.24e-11 | 72 |
presumptive paraxial mesoderm | 2.24e-11 | 72 |
dense mesenchyme tissue | 2.61e-11 | 73 |
unilaminar epithelium | 7.18e-10 | 148 |
skeletal muscle tissue | 1.22e-09 | 62 |
striated muscle tissue | 1.22e-09 | 62 |
myotome | 1.22e-09 | 62 |
surface structure | 1.28e-09 | 99 |
muscle tissue | 2.51e-09 | 64 |
musculature | 2.51e-09 | 64 |
musculature of body | 2.51e-09 | 64 |
cell layer | 2.41e-07 | 309 |
epithelium | 3.01e-07 | 306 |
artery | 5.37e-07 | 42 |
arterial blood vessel | 5.37e-07 | 42 |
arterial system | 5.37e-07 | 42 |
skin of body | 6.24e-07 | 41 |