FFCP PHASE1:Hg19::chr11:9113137..9113151,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:9113137..9113151,- to FFCP PHASE1:Hg19::chr11:9113137..9113151,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57758 | |EntrezGene=57758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30425 | |HGNC=30425 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ36,E7EQD6 | |UniProt=Q9NQ36,E7EQD6 | ||
|association_with_transcript=0bp_to_ENST00000309263,ENST00000457346,ENST00000520467,NM_001170690,NM_020974_5end | |||
|cluster_id=chr11:9113137..9113151,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_1_at_SCUBE2_5end | |||
|id=chr11:9113137..9113151,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.82e-10;65!UBERON:0007297;1.61e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.25e-09;4!DOID:1612;1.25e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.25e-09,4;DOID:1612,1.25e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.38e-39!115;UBERON:0001049!9.02e-21!57;UBERON:0005068!9.02e-21!57;UBERON:0006241!9.02e-21!57;UBERON:0007135!9.02e-21!57;UBERON:0003075!2.90e-17!86;UBERON:0007284!2.90e-17!86;UBERON:0002616!6.08e-16!59;UBERON:0002346!9.39e-16!90;UBERON:0005743!3.59e-15!86;UBERON:0003080!6.39e-15!42;UBERON:0002780!4.80e-14!41;UBERON:0001890!4.80e-14!41;UBERON:0006240!4.80e-14!41;UBERON:0001017!5.58e-14!82;UBERON:0002020!1.35e-13!34;UBERON:0003528!1.35e-13!34;UBERON:0001869!1.49e-13!32;UBERON:0001893!1.54e-13!34;UBERON:0002791!3.47e-13!33;UBERON:0000955!3.70e-13!69;UBERON:0006238!3.70e-13!69;UBERON:0000073!2.66e-12!94;UBERON:0001016!2.66e-12!94;UBERON:0000956!2.81e-12!25;UBERON:0000203!2.81e-12!25;UBERON:0002619!1.23e-11!22;UBERON:0003056!2.90e-11!61;UBERON:0000153!1.47e-10!129;UBERON:0007811!1.47e-10!129;UBERON:0001950!2.99e-10!20;UBERON:0000033!1.98e-09!123;UBERON:0003135!3.88e-08!11;UBERON:0004121!9.31e-08!169;UBERON:0000468!1.81e-07!659;UBERON:0000475!1.95e-07!365;UBERON:0000924!3.28e-07!173;UBERON:0006601!3.28e-07!173;UBERON:0003076!3.90e-07!15;UBERON:0003057!3.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.43e-16;11!UBERON:0000922;1.32e-14;49!UBERON:0006947;4.66e-12;3!UBERON:0004054;4.66e-12;3!UBERON:0003101;7.35e-10;22!UBERON:0000079;7.35e-10;22!UBERON:0005904;3.83e-09;4!UBERON:0001443;9.24e-09;11!UBERON:0000473;5.73e-08;8!UBERON:0003127;7.09e-08;2!UBERON:0002108;7.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.83e-16,11;UBERON:0007023,1.49e-14,114;UBERON:0006947,3.81e-12,3;UBERON:0004054,3.81e-12,3;UBERON:0003101,6.63e-10,22;UBERON:0000079,6.63e-10,22;UBERON:0005904,3.30e-09,4;UBERON:0001443,9.71e-09,11;UBERON:0000473,5.64e-08,8;UBERON:0003127,6.86e-08,2;UBERON:0002108,8.68e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0.85870796139317,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0,0,0.589405839739707,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.843881661206331,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.932949495138334,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.380508304469197,45.0416506836787,38.6318772942693,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,2.0694614258501,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0,0,0.464841513839837,0,0,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0.121360521749513,0,0,0,0,0,0,0.562677665642051,0,0,0,0.796991953004279,0.828851746593443,0,0,0,0,0,0,0,3.05794557474494,0,0,0.969332746095218,0.185536196323703,0,13.5422435764321,0,4.34999745260876,0,0,0,0,0,1.04174996959975,0.885741385813839,0.361789315876224,0,0.995213339381022,1.18219047581419,0,0,0,5.61736887077719,0,0,0,0,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.68069372556344,3.05515072466813,0,0,0,0.471807930864739,4.01288823649394,0.468528891450678,0,0,0,4.73501283419269,3.62972148145992,0.30607276163049,1.39010475182674,0,0,0,0,0,0,0,0,0.173559738335131,0,0,3.84398670132466,0,0,0,0,0.581934098930517,0.176512253383001,0.225980740780532,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,1.11712960508902,0.916641696046735,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0.137539436597234,0,0,0,0.242998226632099,0,0.394028536495991,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0.646414781807753,0.13223260174269,0,0,0,2.35806457649499,1.65695622138878,3.47316215268366,0,0,0,0.544017803369474,2.7575888342497,0.612691153526923,0.655745261419609,0,1.77213635993397,0.122026264901963,0.250381861413,0,0.221858103073705,0.869349641179368,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0.252071696221718,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.0634158101939068,1.09394961803644,0.548257766857182,2.48105589194647,0,0,0,1.00885116665647,0,0.455324382702595,2.48366636455389,0,0,0.475788130837822,0.263091094251396,0,0,12.5588948560822,0.314231179832004,0,2.73947616152849,0,0,1.71543706023975,0,0,0,0,0,0,0,0.430227358820278,0,0,3.38709640152743,0.22910686854405,0,0,0,0,0,0,0.307988420568741,3.4794432940146,2.4285549652957,0,0,0,0,0,0.603851374266694,2.2380505851304,1.09279780251979,0.940634592723046,4.16752146981639,0,0.785233868459781,0.297046400327086,2.5359343655004,0.169927114687817,0.281951753939561,1.4180735354187,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0.203974470572744,0,2.645134202577,0.371995018166751,0.462175628631418,0.432626562123789,0,0.546327859818478,0,4.58949733838918,23.2479142581038,15.989712519063,0,0.454672189309436,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| ||
|short_description=p1@SCUBE2 | |||
}} | }} |
Latest revision as of 01:12, 25 September 2015
Short description: | p1@SCUBE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCUBE2_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 0bp_to_ENST00000309263, ENST00000457346, ENST00000520467, NM_001170690, NM_020974_5end |
EntrezGene: | SCUBE2 |
HGNC: | 30425 |
UniProt: | Q9NQ36E7EQD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.83e-16 | 11 |
adult organism | 1.49e-14 | 114 |
male genital duct | 3.81e-12 | 3 |
internal male genitalia | 3.81e-12 | 3 |
male organism | 6.63e-10 | 22 |
male reproductive system | 6.63e-10 | 22 |
duct of male reproductive system | 3.30e-09 | 4 |
chest | 9.71e-09 | 11 |
testis | 5.64e-08 | 8 |
open tracheal system trachea | 6.86e-08 | 2 |
small intestine | 8.68e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.25e-09 | 4 |
breast cancer | 1.25e-09 | 4 |