FFCP PHASE1:Hg19::chr7:106810363..106810374,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:106810363..106810374,+
|short_description=p9@HBP1
|description=CAGE_peak_9_at_HBP1_5end
|association_with_transcript=145bp_to_ENST00000485846,uc003vdz.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26959 | |EntrezGene=26959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23200 | |HGNC=23200 | ||
|TSSclassifier=strong | |||
|UniProt=O60381 | |UniProt=O60381 | ||
|association_with_transcript=145bp_to_ENST00000485846,uc003vdz.2_5end | |||
|cluster_id=chr7:106810363..106810374,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_HBP1_5end | |||
|id=chr7:106810363..106810374,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.48e-38!42;CL:0000860!8.34e-37!45;CL:0000766!6.91e-28!76;CL:0000839!1.87e-26!70;CL:0000763!4.89e-24!112;CL:0000049!4.89e-24!112;CL:0000557!4.73e-23!71;CL:0002194!7.88e-22!63;CL:0000576!7.88e-22!63;CL:0000040!7.88e-22!63;CL:0000559!7.88e-22!63;CL:0002009!8.96e-21!65;CL:0000738!5.57e-19!140;CL:0002032!6.15e-18!165;CL:0000837!6.15e-18!165;CL:0000037!3.48e-17!172;CL:0000566!3.48e-17!172;CL:0002031!1.61e-16!124;CL:0000988!5.49e-16!182;CL:0002087!1.72e-13!119;CL:0002393!4.68e-10!9;CL:0002397!4.68e-10!9;CL:0000219!3.34e-08!390;CL:0000148!1.76e-07!10;CL:0000541!1.76e-07!10;CL:0002320!4.06e-07!365;CL:0000134!6.59e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.94e-38;33!CL:0002057;2.94e-38;33!CL:0000473;6.26e-27;39!CL:0000234;6.26e-27;39!CL:0000576;3.21e-15;48!CL:0000766;6.24e-15;69!CL:0002087;4.59e-09;104!CL:0000763;2.44e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-32,42;CL:0002057,1.52e-32,42;CL:0000473,2.59e-28,48;CL:0000234,2.59e-28,48;CL:0000766,1.48e-25,72;CL:0000839,9.71e-24,66;CL:0000557,2.28e-23,67;CL:0002194,2.21e-22,59;CL:0000576,2.21e-22,59;CL:0000040,2.21e-22,59;CL:0000559,2.21e-22,59;CL:0002009,1.29e-21,61;CL:0000763,1.45e-16,108;CL:0000049,1.45e-16,108;CL:0000738,4.94e-15,136;CL:0002031,9.79e-15,120;CL:0002087,4.64e-13,115;CL:0002032,2.01e-12,161;CL:0000837,2.01e-12,161;CL:0000037,7.87e-12,168;CL:0000988,3.90e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.33e-19!80;UBERON:0001474!1.71e-18!86;UBERON:0002390!4.63e-17!102;UBERON:0003061!4.63e-17!102;UBERON:0004765!2.06e-15!101;UBERON:0001434!2.06e-15!101;UBERON:0002193!4.23e-15!112;UBERON:0002405!1.06e-14!115;UBERON:0002204!4.51e-07!167;UBERON:0002384!4.57e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-20,76;UBERON:0001474,7.21e-19,82;UBERON:0004765,4.50e-17,90;UBERON:0002405,1.77e-16,93;UBERON:0002390,1.45e-15,98;UBERON:0003061,1.45e-15,98;UBERON:0001434,3.17e-15,100;UBERON:0002193,5.44e-14,108;UBERON:0002204,1.70e-08,167;UBERON:0003081,5.49e-08,203 | |||
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| ||
|short_description=p9@HBP1 | |||
}} | }} |
Latest revision as of 01:15, 25 September 2015
Short description: | p9@HBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HBP1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 145bp_to_ENST00000485846, uc003vdz.2_5end |
EntrezGene: | HBP1 |
HGNC: | 23200 |
UniProt: | O60381 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.52e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-32 | 42 |
defensive cell | 2.59e-28 | 48 |
phagocyte | 2.59e-28 | 48 |
myeloid leukocyte | 1.48e-25 | 72 |
myeloid lineage restricted progenitor cell | 9.71e-24 | 66 |
granulocyte monocyte progenitor cell | 2.28e-23 | 67 |
monopoietic cell | 2.21e-22 | 59 |
monocyte | 2.21e-22 | 59 |
monoblast | 2.21e-22 | 59 |
promonocyte | 2.21e-22 | 59 |
macrophage dendritic cell progenitor | 1.29e-21 | 61 |
myeloid cell | 1.45e-16 | 108 |
common myeloid progenitor | 1.45e-16 | 108 |
leukocyte | 4.94e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 9.79e-15 | 120 |
nongranular leukocyte | 4.64e-13 | 115 |
hematopoietic oligopotent progenitor cell | 2.01e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-12 | 161 |
hematopoietic stem cell | 7.87e-12 | 168 |
hematopoietic cell | 3.90e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.85e-20 | 76 |
bone element | 7.21e-19 | 82 |
skeletal element | 4.50e-17 | 90 |
immune system | 1.77e-16 | 93 |
hematopoietic system | 1.45e-15 | 98 |
blood island | 1.45e-15 | 98 |
skeletal system | 3.17e-15 | 100 |
hemolymphoid system | 5.44e-14 | 108 |
musculoskeletal system | 1.70e-08 | 167 |
lateral plate mesoderm | 5.49e-08 | 203 |