FFCP PHASE1:Hg19::chr20:30433431..30433442,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:30433431..30433442,- to FFCP PHASE1:Hg19::chr20:30433431..30433442,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2307 | |EntrezGene=2307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3735 | |HGNC=3735 | ||
|TSSclassifier=strong | |||
|UniProt=O43638 | |UniProt=O43638 | ||
|association_with_transcript=-11bp_to_ENST00000375978,NM_004118,uc002wwt.1_5end | |||
|cluster_id=chr20:30433431..30433442,- | |||
|description=CAGE_peak_2_at_FOXS1_5end | |||
|id=chr20:30433431..30433442,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.46e-14;3!CL:0000067;2.46e-14;3!CL:0005012;2.46e-14;3!CL:0002304;2.46e-14;3!CL:0002549;1.14e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.45e-14,3;CL:0000067,3.45e-14,3;CL:0005012,3.45e-14,3;CL:0002304,3.45e-14,3;CL:0002549,1.93e-09,2;CL:0002603,8.27e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.89e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1192,6.74e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003075!3.67e-11!86;UBERON:0007284!3.67e-11!86;UBERON:0002346!3.32e-10!90;UBERON:0003103!5.44e-10!69;UBERON:0000025!6.21e-09!194;UBERON:0000119!7.71e-09!312;UBERON:0007100!8.32e-09!27;UBERON:0000153!2.76e-08!129;UBERON:0007811!2.76e-08!129;UBERON:0005743!3.36e-08!86;UBERON:0007023!3.76e-08!115;UBERON:0000073!4.85e-08!94;UBERON:0001016!4.85e-08!94;UBERON:0000483!8.36e-08!309;UBERON:0001017!1.44e-07!82;UBERON:0000955!1.66e-07!69;UBERON:0006238!1.66e-07!69;UBERON:0002616!2.53e-07!59;UBERON:0000481!3.79e-07!347;UBERON:0000477!4.02e-07!286;UBERON:0000488!5.81e-07!4;UBERON:0001009!6.88e-07!113;UBERON:0000033!7.09e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.09e-18;4!UBERON:0001778;2.46e-14;3!UBERON:0001775;2.46e-14;3!UBERON:0006876;6.34e-14;11!UBERON:0002203;4.13e-12;6!UBERON:0001768;4.13e-12;6!UBERON:0002200;4.13e-12;6!UBERON:0007625;8.32e-10;11!UBERON:0005629;1.14e-09;2!UBERON:0005358;1.14e-09;2!UBERON:0001886;1.14e-09;2!UBERON:0004086;1.14e-09;2!UBERON:0005282;1.14e-09;2!UBERON:0005281;1.14e-09;2!UBERON:0001032;6.37e-08;24!UBERON:0004456;6.37e-08;24!UBERON:0001801;1.23e-07;14!UBERON:0002104;6.83e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,7.76e-18,4;UBERON:0001778,3.45e-14,3;UBERON:0001775,3.45e-14,3;UBERON:0006876,1.17e-13,11;UBERON:0002203,6.28e-12,6;UBERON:0001768,6.28e-12,6;UBERON:0002200,6.28e-12,6;UBERON:0007625,1.27e-09,11;UBERON:0005629,1.93e-09,2;UBERON:0005358,1.93e-09,2;UBERON:0001886,1.93e-09,2;UBERON:0004086,1.93e-09,2;UBERON:0005282,1.93e-09,2;UBERON:0005281,1.93e-09,2;UBERON:0001009,2.01e-09,112;UBERON:0002049,4.58e-09,78;UBERON:0007798,4.58e-09,78;UBERON:0004535,1.18e-08,109;UBERON:0003498,4.22e-08,5;UBERON:0005985,4.22e-08,5;UBERON:0000020,7.45e-08,24;UBERON:0001032,7.45e-08,24;UBERON:0004456,7.45e-08,24;UBERON:0001801,1.70e-07,14;UBERON:0000019,3.74e-07,20;UBERON:0000047,3.74e-07,20;UBERON:0010312,3.74e-07,20;UBERON:0004088,3.74e-07,20;UBERON:0010230,3.74e-07,20;UBERON:0003072,3.74e-07,20;UBERON:0004128,3.74e-07,20;UBERON:0003071,3.74e-07,20;UBERON:0007100,8.25e-07,27;UBERON:0000970,8.78e-07,21;UBERON:0002104,8.78e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,2.24400760368678,1.88072832886853,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,2.17430079477356,2.21729397462564,3.24988707064566,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0,0,0.354668382198357,0,4.2699598291882,1.48000529050296,0,0.67355336034844,0,1.05950199351452,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.518305275076852,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0.115930404975077,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,1.0267360014933,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,1.28812398067792,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,1.61745985258653,1.58510321173008,0,0,0,0,0.136499911407986,0,1.13008116620243,0,1.32687795048244,3.06915619677634,0,0,0.202910376962704,0.6196469961995,2.81695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18420775327246,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,2.40773294189637,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0.569219092059585,4.02156551738102,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.677942222341597,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,1.28767814440971,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.681909645754975,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0,3.78554694685953,0,0.214441591374926,0,1.36023555307363,0,0,0,2.47041157728778,0,0,0.192914038270915,0,0,1.0362910251936,0,0.138258436151731,0,0,0,1.96565909307848,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,0,0,0,0,0,0.252071696221718,0.345786262321089,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0.443511850813194,0,1.54339208493677,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,3.65263488203798,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,0,0,0,0,4.6392577253528,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0.8453114551668,0.509781344063451,0,0.644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,2.1161073620616,0.371995018166751,0,0,0,0,0.506794004045748,0,0,0,0,0.227336094654718,0.803892390468535,0,0,0.213233981900981,2.61870874610114,0.258355639344024,0.558672428662721,1.23345048838675,0,0,0.435433495793923,1.71116650542641,0.202056159043763,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.488965776731466,5.69654649642034,0,1.61019034872821,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,2.24400760368678,1.88072832886853,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,2.17430079477356,2.21729397462564,3.24988707064566,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0,0,0.354668382198357,0,4.2699598291882,1.48000529050296,0,0.67355336034844,0,1.05950199351452,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.518305275076852,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0.115930404975077,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,1.0267360014933,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,1.28812398067792,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,1.61745985258653,1.58510321173008,0,0,0,0,0.136499911407986,0,1.13008116620243,0,1.32687795048244,3.06915619677634,0,0,0.202910376962704,0.6196469961995,2.81695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18420775327246,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,2.40773294189637,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0.569219092059585,4.02156551738102,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.677942222341597,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,1.28767814440971,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.681909645754975,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0,3.78554694685953,0,0.214441591374926,0,1.36023555307363,0,0,0,2.47041157728778,0,0,0.192914038270915,0,0,1.0362910251936,0,0.138258436151731,0,0,0,1.96565909307848,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,0,0,0,0,0,0.252071696221718,0.345786262321089,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0.443511850813194,0,1.54339208493677,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,3.65263488203798,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,0,0,0,0,4.6392577253528,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0.8453114551668,0.509781344063451,0,0.644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,2.1161073620616,0.371995018166751,0,0,0,0,0.506794004045748,0,0,0,0,0.227336094654718,0.803892390468535,0,0,0.213233981900981,2.61870874610114,0.258355639344024,0.558672428662721,1.23345048838675,0,0,0.435433495793923,1.71116650542641,0.202056159043763,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.488965776731466,5.69654649642034,0,1.61019034872821,0 | ||
|short_description=p2@FOXS1 | |||
}} | }} |
Latest revision as of 01:31, 25 September 2015
Short description: | p2@FOXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000375978, NM_004118, uc002wwt.1_5end |
EntrezGene: | FOXS1 |
HGNC: | 3735 |
UniProt: | O43638 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.45e-14 | 3 |
ciliated epithelial cell | 3.45e-14 | 3 |
multi-ciliated epithelial cell | 3.45e-14 | 3 |
non-pigmented ciliary epithelial cell | 3.45e-14 | 3 |
fibroblast of choroid plexus | 1.93e-09 | 2 |
astrocyte of the cerebellum | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 7.76e-18 | 4 |
ciliary epithelium | 3.45e-14 | 3 |
ciliary body | 3.45e-14 | 3 |
vasculature of organ | 1.17e-13 | 11 |
vasculature of eye | 6.28e-12 | 6 |
uvea | 6.28e-12 | 6 |
vasculature of head | 6.28e-12 | 6 |
pigment epithelium of eye | 1.27e-09 | 11 |
vascular plexus | 1.93e-09 | 2 |
ventricle of nervous system | 1.93e-09 | 2 |
choroid plexus | 1.93e-09 | 2 |
brain ventricle | 1.93e-09 | 2 |
ventricular system of brain | 1.93e-09 | 2 |
ventricular system of central nervous system | 1.93e-09 | 2 |
circulatory system | 2.01e-09 | 112 |
vasculature | 4.58e-09 | 78 |
vascular system | 4.58e-09 | 78 |
cardiovascular system | 1.18e-08 | 109 |
heart blood vessel | 4.22e-08 | 5 |
coronary vessel | 4.22e-08 | 5 |
sense organ | 7.45e-08 | 24 |
sensory system | 7.45e-08 | 24 |
entire sense organ system | 7.45e-08 | 24 |
anterior segment of eyeball | 1.70e-07 | 14 |
camera-type eye | 3.74e-07 | 20 |
simple eye | 3.74e-07 | 20 |
immature eye | 3.74e-07 | 20 |
ocular region | 3.74e-07 | 20 |
eyeball of camera-type eye | 3.74e-07 | 20 |
optic cup | 3.74e-07 | 20 |
optic vesicle | 3.74e-07 | 20 |
eye primordium | 3.74e-07 | 20 |
primary circulatory organ | 8.25e-07 | 27 |
eye | 8.78e-07 | 21 |
visual system | 8.78e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 6.74e-07 | 3 |