FFCP PHASE1:Hg19::chr19:10541462..10541526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5141 | |EntrezGene=5141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8780 | |HGNC=8780 | ||
|TSSclassifier=strong | |||
|UniProt=P27815 | |UniProt=P27815 | ||
|association_with_transcript=0bp_to_ENST00000293683,NM_001111308,uc002mok.2_5end | |association_with_transcript=0bp_to_ENST00000293683,NM_001111308,uc002mok.2_5end | ||
|cluster_id=chr19:10541462..10541526,+ | |||
|description=CAGE_peak_2_at_PDE4A_5end | |description=CAGE_peak_2_at_PDE4A_5end | ||
|id=chr19:10541462..10541526,+ | |id=chr19:10541462..10541526,+ | ||
|ontology_enrichment_celltype=CL:0000557!1.03e-24!71;CL:0000766!9.80e-24!76;CL:0002009!1.68e-22!65;CL:0000839!4.13e-22!70;CL:0002194!1.59e-21!63;CL:0000576!1.59e-21!63;CL:0000040!1.59e-21!63;CL:0000559!1.59e-21!63;CL:0002057!1.63e-21!42;CL:0000860!8.64e-18!45;CL:0000763!1.70e-14!112;CL:0000049!1.70e-14!112;CL:0000048!1.67e-11!430;CL:0002320!6.17e-11!365;CL:0000134!9.62e-11!358;CL:0000723!4.10e-10!436;CL:0000034!9.78e-09!444;CL:0000057!6.63e-08!75;CL:0000219!1.66e-07!390 | |ontology_enrichment_celltype=CL:0000557!1.03e-24!71;CL:0000766!9.80e-24!76;CL:0002009!1.68e-22!65;CL:0000839!4.13e-22!70;CL:0002194!1.59e-21!63;CL:0000576!1.59e-21!63;CL:0000040!1.59e-21!63;CL:0000559!1.59e-21!63;CL:0002057!1.63e-21!42;CL:0000860!8.64e-18!45;CL:0000763!1.70e-14!112;CL:0000049!1.70e-14!112;CL:0000048!1.67e-11!430;CL:0002320!6.17e-11!365;CL:0000134!9.62e-11!358;CL:0000723!4.10e-10!436;CL:0000034!9.78e-09!444;CL:0000057!6.63e-08!75;CL:0000219!1.66e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.91e-17;33!CL:0002057;2.91e-17;33!CL:0000473;4.05e-17;39!CL:0000234;4.05e-17;39!CL:0000576;2.53e-13;48!CL:0000766;1.23e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.29e-28,67;CL:0000766,8.93e-27,72;CL:0000473,1.17e-25,48;CL:0000234,1.17e-25,48;CL:0002009,1.72e-25,61;CL:0000839,2.81e-25,66;CL:0002194,1.90e-24,59;CL:0000576,1.90e-24,59;CL:0000040,1.90e-24,59;CL:0000559,1.90e-24,59;CL:0000860,1.94e-22,42;CL:0002057,1.94e-22,42;CL:0000763,8.16e-18,108;CL:0000049,8.16e-18,108;CL:0000048,8.49e-15,427;CL:0002320,1.87e-14,361;CL:0000134,2.37e-14,354;CL:0000723,2.59e-13,433;CL:0000034,1.08e-11,441;CL:0000219,2.21e-10,386;CL:0000057,1.63e-08,76 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.79e-22!80;UBERON:0002204!2.41e-21!167;UBERON:0003081!1.55e-18!216;UBERON:0001474!3.19e-18!86;UBERON:0004765!2.00e-17!101;UBERON:0001434!2.00e-17!101;UBERON:0002405!2.81e-16!115;UBERON:0002390!3.12e-15!102;UBERON:0003061!3.12e-15!102;UBERON:0002193!2.57e-14!112;UBERON:0000926!7.64e-13!448;UBERON:0004120!7.64e-13!448;UBERON:0006603!7.64e-13!448;UBERON:0002384!4.66e-11!375;UBERON:0000480!2.56e-07!626;UBERON:0000467!2.67e-07!625;UBERON:0000468!3.74e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-24,76;UBERON:0002204,7.16e-22,167;UBERON:0001474,9.60e-21,82;UBERON:0003081,1.24e-19,203;UBERON:0000926,3.57e-19,315;UBERON:0004120,3.57e-19,315;UBERON:0006603,3.57e-19,315;UBERON:0002405,3.96e-19,93;UBERON:0001434,4.22e-19,100;UBERON:0004765,7.16e-18,90;UBERON:0002390,6.22e-16,98;UBERON:0003061,6.22e-16,98;UBERON:0002384,9.64e-15,371;UBERON:0002193,1.28e-14,108;UBERON:0000479,2.63e-09,773 | |||
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|short_description=p2@PDE4A | |short_description=p2@PDE4A | ||
}} | }} |
Latest revision as of 01:37, 25 September 2015
Short description: | p2@PDE4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDE4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000293683, NM_001111308, uc002mok.2_5end |
EntrezGene: | PDE4A |
HGNC: | 8780 |
UniProt: | P27815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.29e-28 | 67 |
myeloid leukocyte | 8.93e-27 | 72 |
defensive cell | 1.17e-25 | 48 |
phagocyte | 1.17e-25 | 48 |
macrophage dendritic cell progenitor | 1.72e-25 | 61 |
myeloid lineage restricted progenitor cell | 2.81e-25 | 66 |
monopoietic cell | 1.90e-24 | 59 |
monocyte | 1.90e-24 | 59 |
monoblast | 1.90e-24 | 59 |
promonocyte | 1.90e-24 | 59 |
classical monocyte | 1.94e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-22 | 42 |
myeloid cell | 8.16e-18 | 108 |
common myeloid progenitor | 8.16e-18 | 108 |
multi fate stem cell | 8.49e-15 | 427 |
connective tissue cell | 1.87e-14 | 361 |
mesenchymal cell | 2.37e-14 | 354 |
somatic stem cell | 2.59e-13 | 433 |
stem cell | 1.08e-11 | 441 |
motile cell | 2.21e-10 | 386 |
fibroblast | 1.63e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.91e-24 | 76 |
musculoskeletal system | 7.16e-22 | 167 |
bone element | 9.60e-21 | 82 |
lateral plate mesoderm | 1.24e-19 | 203 |
mesoderm | 3.57e-19 | 315 |
mesoderm-derived structure | 3.57e-19 | 315 |
presumptive mesoderm | 3.57e-19 | 315 |
immune system | 3.96e-19 | 93 |
skeletal system | 4.22e-19 | 100 |
skeletal element | 7.16e-18 | 90 |
hematopoietic system | 6.22e-16 | 98 |
blood island | 6.22e-16 | 98 |
connective tissue | 9.64e-15 | 371 |
hemolymphoid system | 1.28e-14 | 108 |
tissue | 2.63e-09 | 773 |