FFCP PHASE1:Hg19::chr17:4402213..4402226,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26992 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVW8 | |||
|association_with_transcript=84bp_to_ENST00000329078,NM_001124758,uc002fxx.2_5end | |||
|cluster_id=chr17:4402213..4402226,+ | |||
|coexpression_cluster_id=C3643 | |||
|description=CAGE_peak_3_at_SPNS2_5end | |||
|id=chr17:4402213..4402226,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.06e-13!24;CL:1000497!1.05e-12!18;CL:0002518!1.05e-12!18;CL:1000449!1.64e-11!16;CL:0000115!2.80e-11!35;CL:0002078!1.93e-10!44;CL:1000507!4.71e-10!12;CL:1000494!4.71e-10!12;CL:0002681!6.22e-09!13;CL:0002584!6.22e-09!13;CL:0000071!1.98e-08!18;CL:0002546!1.98e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.33e-20;15!CL:1000497;5.72e-20;17!CL:0002518;5.72e-20;17!CL:0002681;1.44e-15;12!CL:0002584;1.44e-15;12!CL:1000507;2.53e-15;10!CL:1000494;2.53e-15;10!CL:0002139;4.92e-13;24!CL:0000115;4.35e-12;36!CL:0002078;1.49e-10;45!CL:0002138;7.65e-08;6!CL:0000071;1.26e-07;18!CL:0000239;3.33e-07;3!CL:1000615;3.33e-07;3!CL:0002306;3.33e-07;3!CL:1000746;4.35e-07;7!CL:1000612;4.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,3.45e-20,15;CL:1000497,3.93e-20,17;CL:0002518,3.93e-20,17;CL:1000507,1.43e-15,10;CL:1000494,1.43e-15,10;CL:0002078,1.45e-15,45;CL:0002681,2.35e-15,12;CL:0002584,2.35e-15,12;CL:0000115,6.03e-15,36;CL:0002139,4.26e-13,24;CL:0000213,2.58e-08,58;CL:0000215,2.58e-08,58;CL:0005020,4.48e-08,6;CL:0002138,4.48e-08,6;CL:0005022,4.48e-08,6;CL:0000071,1.52e-07,18;CL:0002546,1.52e-07,18;CL:0000239,3.48e-07,3;CL:1000615,3.48e-07,3;CL:0002306,3.48e-07,3;CL:1000746,7.15e-07,7;CL:1000612,7.15e-07,7;CL:0002144,8.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;7.65e-08;6!CL:0002546;1.26e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-33!115;UBERON:0001049!6.68e-22!57;UBERON:0005068!6.68e-22!57;UBERON:0006241!6.68e-22!57;UBERON:0007135!6.68e-22!57;UBERON:0005743!5.55e-19!86;UBERON:0003075!1.29e-17!86;UBERON:0007284!1.29e-17!86;UBERON:0002616!1.71e-17!59;UBERON:0003080!1.94e-17!42;UBERON:0000073!3.30e-17!94;UBERON:0001016!3.30e-17!94;UBERON:0002780!6.41e-17!41;UBERON:0001890!6.41e-17!41;UBERON:0006240!6.41e-17!41;UBERON:0004111!8.16e-17!241;UBERON:0001893!1.46e-16!34;UBERON:0001017!2.16e-16!82;UBERON:0002020!4.55e-16!34;UBERON:0003528!4.55e-16!34;UBERON:0002346!5.42e-16!90;UBERON:0002791!9.76e-16!33;UBERON:0000025!9.85e-16!194;UBERON:0000955!4.10e-15!69;UBERON:0006238!4.10e-15!69;UBERON:0001869!7.16e-15!32;UBERON:0002619!4.21e-14!22;UBERON:0003056!1.15e-13!61;UBERON:0001950!8.98e-13!20;UBERON:0000477!1.76e-12!286;UBERON:0000489!9.84e-12!32;UBERON:0006555!1.10e-11!17;UBERON:0005103!1.10e-11!17;UBERON:0000083!1.10e-11!17;UBERON:0009201!1.10e-11!17;UBERON:0004819!1.10e-11!17;UBERON:0006553!1.10e-11!17;UBERON:0003074!1.10e-11!17;UBERON:0003060!1.10e-11!17;UBERON:0000956!1.42e-11!25;UBERON:0000203!1.42e-11!25;UBERON:0004211!1.64e-11!16;UBERON:0001285!1.64e-11!16;UBERON:0007684!1.64e-11!16;UBERON:0003220!1.64e-11!16;UBERON:0004208!1.64e-11!16;UBERON:0000153!2.63e-11!129;UBERON:0007811!2.63e-11!129;UBERON:0000033!3.93e-11!123;UBERON:0003887!5.52e-11!21;UBERON:0002113!7.92e-11!27;UBERON:0003918!7.92e-11!27;UBERON:0005095!7.92e-11!27;UBERON:0007687!7.92e-11!27;UBERON:0000080!1.03e-10!18;UBERON:0002120!1.03e-10!18;UBERON:0004875!1.03e-10!18;UBERON:0005721!1.03e-10!18;UBERON:0005754!1.03e-10!18;UBERON:0007297!1.03e-10!18;UBERON:0004876!2.01e-10!20;UBERON:0009773!4.71e-10!12;UBERON:0001231!4.71e-10!12;UBERON:0004810!4.71e-10!12;UBERON:0000064!2.68e-09!219;UBERON:0000058!5.05e-09!26;UBERON:0001225!6.22e-09!13;UBERON:0008987!6.22e-09!13;UBERON:0001986!1.98e-08!18;UBERON:0004638!1.98e-08!18;UBERON:0004852!1.98e-08!18;UBERON:0004121!1.99e-08!169;UBERON:0000924!8.40e-08!173;UBERON:0006601!8.40e-08!173;UBERON:0000483!1.58e-07!309;UBERON:0000353!2.30e-07!17;UBERON:0000119!3.37e-07!312;UBERON:0002298!3.47e-07!8;UBERON:0000487!7.05e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.33e-20;15!UBERON:0004819;3.33e-20;15!UBERON:0001285;3.33e-20;15!UBERON:0007684;3.33e-20;15!UBERON:0002113;3.72e-17;24!UBERON:0011143;3.72e-17;24!UBERON:0001893;6.76e-16;34!UBERON:0001225;1.44e-15;12!UBERON:0008987;1.44e-15;12!UBERON:0004211;2.53e-15;10!UBERON:0009773;2.53e-15;10!UBERON:0001231;2.53e-15;10!UBERON:0004810;2.53e-15;10!UBERON:0000489;4.13e-15;29!UBERON:0000353;1.23e-14;15!UBERON:0002780;1.68e-14;41!UBERON:0001890;1.68e-14;41!UBERON:0002791;3.47e-14;32!UBERON:0002619;7.12e-14;22!UBERON:0001869;8.51e-14;32!UBERON:0003528;1.15e-13;34!UBERON:0002020;1.15e-13;34!UBERON:0000073;1.24e-13;53!UBERON:0002616;1.24e-13;53!UBERON:0001950;2.51e-13;20!UBERON:0006554;8.75e-13;30!UBERON:0001008;8.75e-13;30!UBERON:0001851;6.39e-12;15!UBERON:0000956;8.21e-12;25!UBERON:0000203;8.21e-12;25!UBERON:0002465;4.74e-08;10!UBERON:0000955;8.45e-08;68!UBERON:0004638;1.26e-07;18!UBERON:0001986;1.26e-07;18!UBERON:0004852;1.26e-07;18!UBERON:0006853;3.33e-07;3!UBERON:0007685;3.33e-07;3!UBERON:0004134;3.33e-07;3!UBERON:0000074;4.35e-07;7!UBERON:0001229;4.35e-07;7!UBERON:0007023;5.22e-07;114 | |||
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| |||
|short_description=p3@SPNS2 | |||
}} |
Latest revision as of 02:19, 25 September 2015
Short description: | p3@SPNS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPNS2_5end |
Coexpression cluster: | C3643_Renal_signet_Hepatic_acute_mesothelioma_Retinal_smallcell |
Association with transcript: | 84bp_to_ENST00000329078, NM_001124758, uc002fxx.2_5end |
EntrezGene: | SPNS2 |
HGNC: | 26992 |
UniProt: | Q8IVW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 3.45e-20 | 15 |
kidney cell | 3.93e-20 | 17 |
kidney epithelial cell | 3.93e-20 | 17 |
kidney tubule cell | 1.43e-15 | 10 |
nephron tubule epithelial cell | 1.43e-15 | 10 |
meso-epithelial cell | 1.45e-15 | 45 |
kidney cortical cell | 2.35e-15 | 12 |
renal cortical epithelial cell | 2.35e-15 | 12 |
endothelial cell | 6.03e-15 | 36 |
endothelial cell of vascular tree | 4.26e-13 | 24 |
lining cell | 2.58e-08 | 58 |
barrier cell | 2.58e-08 | 58 |
lymphangioblast | 4.48e-08 | 6 |
endothelial cell of lymphatic vessel | 4.48e-08 | 6 |
vascular lymphangioblast | 4.48e-08 | 6 |
blood vessel endothelial cell | 1.52e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.52e-07 | 18 |
brush border epithelial cell | 3.48e-07 | 3 |
kidney cortex tubule cell | 3.48e-07 | 3 |
epithelial cell of proximal tubule | 3.48e-07 | 3 |
glomerular cell | 7.15e-07 | 7 |
kidney corpuscule cell | 7.15e-07 | 7 |
capillary endothelial cell | 8.99e-07 | 3 |