FFCP PHASE1:Hg19::chr19:1090012..1090018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5434 | |EntrezGene=5434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9192 | |HGNC=9192 | ||
|TSSclassifier=strong | |||
|UniProt=P19388 | |UniProt=P19388 | ||
|association_with_transcript=-51bp_to_S42643_5end | |association_with_transcript=-51bp_to_S42643_5end | ||
|cluster_id=chr19:1090012..1090018,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_7_at_POLR2E_5end | |description=CAGE_peak_7_at_POLR2E_5end | ||
|id=chr19:1090012..1090018,- | |id=chr19:1090012..1090018,- | ||
|ontology_enrichment_celltype=CL:0000453!7.76e-26!5;CL:0000557!1.92e-24!71;CL:0000990!9.12e-22!8;CL:0000839!1.30e-21!70;CL:0000763!2.42e-21!112;CL:0000049!2.42e-21!112;CL:0000766!1.03e-19!76;CL:0000451!8.63e-18!10;CL:0002009!3.48e-17!65;CL:0002057!1.63e-16!42;CL:0000738!2.03e-16!140;CL:0000860!2.62e-15!45;CL:0002274!3.41e-15!5;CL:0000457!3.41e-15!5;CL:0002191!3.41e-15!5;CL:0000097!3.41e-15!5;CL:0000831!3.41e-15!5;CL:0002028!3.41e-15!5;CL:0002194!5.34e-15!63;CL:0000576!5.34e-15!63;CL:0000040!5.34e-15!63;CL:0000559!5.34e-15!63;CL:0002393!9.51e-14!9;CL:0002397!9.51e-14!9;CL:0002032!2.02e-13!165;CL:0000837!2.02e-13!165;CL:0002031!7.86e-13!124;CL:0000037!9.76e-13!172;CL:0000566!9.76e-13!172;CL:0000988!7.53e-12!182;CL:0000163!1.17e-08!9;CL:0002087!4.93e-07!119 | |ontology_enrichment_celltype=CL:0000453!7.76e-26!5;CL:0000557!1.92e-24!71;CL:0000990!9.12e-22!8;CL:0000839!1.30e-21!70;CL:0000763!2.42e-21!112;CL:0000049!2.42e-21!112;CL:0000766!1.03e-19!76;CL:0000451!8.63e-18!10;CL:0002009!3.48e-17!65;CL:0002057!1.63e-16!42;CL:0000738!2.03e-16!140;CL:0000860!2.62e-15!45;CL:0002274!3.41e-15!5;CL:0000457!3.41e-15!5;CL:0002191!3.41e-15!5;CL:0000097!3.41e-15!5;CL:0000831!3.41e-15!5;CL:0002028!3.41e-15!5;CL:0002194!5.34e-15!63;CL:0000576!5.34e-15!63;CL:0000040!5.34e-15!63;CL:0000559!5.34e-15!63;CL:0002393!9.51e-14!9;CL:0002397!9.51e-14!9;CL:0002032!2.02e-13!165;CL:0000837!2.02e-13!165;CL:0002031!7.86e-13!124;CL:0000037!9.76e-13!172;CL:0000566!9.76e-13!172;CL:0000988!7.53e-12!182;CL:0000163!1.17e-08!9;CL:0002087!4.93e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.72e-89;5!CL:0000163;6.09e-50;9!CL:0000151;2.48e-13;36!CL:0000453;3.42e-11;5!CL:0000990;8.61e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.98e-89,5;CL:0002028,8.98e-89,5;CL:0000163,6.62e-50,9;CL:0000151,2.78e-13,36;CL:0000453,3.26e-11,5;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0000839,1.53e-07,66;CL:0000557,1.92e-07,67;CL:0000766,5.48e-07,72;CL:0000990,8.37e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.54e-24!80;UBERON:0002193!1.39e-23!112;UBERON:0002390!1.67e-23!102;UBERON:0003061!1.67e-23!102;UBERON:0001474!1.97e-22!86;UBERON:0002405!2.14e-20!115;UBERON:0004765!1.13e-18!101;UBERON:0001434!1.13e-18!101;UBERON:0002204!4.19e-10!167;UBERON:0003081!2.47e-09!216;UBERON:0002372!1.07e-08!1;UBERON:0001961!1.07e-08!1;UBERON:0001744!1.07e-08!1;UBERON:0001735!1.07e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@POLR2E | |short_description=p7@POLR2E | ||
}} | }} |
Latest revision as of 03:06, 25 September 2015
Short description: | p7@POLR2E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_POLR2E_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -51bp_to_S42643_5end |
EntrezGene: | POLR2E |
HGNC: | 9192 |
UniProt: | P19388 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.98e-89 | 5 |
basophil mast progenitor cell | 8.98e-89 | 5 |
endocrine cell | 6.62e-50 | 9 |
secretory cell | 2.78e-13 | 36 |
Langerhans cell | 3.26e-11 | 5 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.53e-07 | 66 |
granulocyte monocyte progenitor cell | 1.92e-07 | 67 |
myeloid leukocyte | 5.48e-07 | 72 |
conventional dendritic cell | 8.37e-07 | 8 |