FFCP PHASE1:Hg19::chr1:100111825..100111877,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54873 | |EntrezGene=54873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15846 | |HGNC=15846 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP74 | |UniProt=Q9NP74 | ||
|association_with_transcript=326bp_to_ENST00000263174_5end | |association_with_transcript=326bp_to_ENST00000263174_5end | ||
|cluster_id=chr1:100111825..100111877,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_2_at_PALMD_5end | |description=CAGE_peak_2_at_PALMD_5end | ||
|id=chr1:100111825..100111877,+ | |id=chr1:100111825..100111877,+ | ||
|ontology_enrichment_celltype=CL:0000136;6.95e-15;13!CL:0002139;7.47e-11;24!CL:0000115;3.19e-09;36 | |ontology_enrichment_celltype=CL:0002139!1.16e-11!24;CL:0000115!4.06e-10!35;CL:0002078!2.10e-08!44;CL:0000071!5.64e-08!18;CL:0002546!5.64e-08!18;CL:0000136!1.12e-07!15 | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;6.95e-15;13!CL:0002139;7.47e-11;24!CL:0000115;3.19e-09;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.69e-12,15;CL:0000115,5.80e-11,36;CL:0002139,6.31e-11,24;CL:0002078,1.85e-09,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.07e-23!115;UBERON:0000477!6.02e-16!286;UBERON:0004111!3.11e-13!241;UBERON:0000467!3.47e-12!625;UBERON:0000480!4.78e-12!626;UBERON:0000468!8.24e-12!659;UBERON:0000025!5.02e-10!194;UBERON:0000483!2.39e-08!309;UBERON:0001986!5.64e-08!18;UBERON:0004638!5.64e-08!18;UBERON:0004852!5.64e-08!18;UBERON:0000119!6.00e-08!312;UBERON:0004872!1.26e-07!84;UBERON:0000055!1.59e-07!69;UBERON:0000481!2.65e-07!347;UBERON:0002050!3.99e-07!605;UBERON:0005423!3.99e-07!605;UBERON:0000922!4.36e-07!612;UBERON:0002049!5.34e-07!79;UBERON:0007798!5.34e-07!79;UBERON:0000923!7.28e-07!604;UBERON:0005291!7.28e-07!604;UBERON:0006598!7.28e-07!604;UBERON:0002532!7.28e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-16,114;UBERON:0000055,8.08e-07,68 | |||
|phase1_expression=1.63510541343501,4.49611100171065,8.03440103347036,2.00146596706261,10.7270662662549,0,10.1319951267324,1.89515962028049,21.6784071405866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,1.80719576192283,2.50668955317945,1.59331170856906,3.1811437882044,3.40644409211845,0.378139268656271,0,0.175669571386252,1.89919659471683,0,0,0,0,0,0,0,0,0.993812036833525,0,2.08284300964557,1.69592382577203,0.419499436209906,1.92582629358047,2.50793959844173,7.75250277507987,8.89415656716776,21.4221192169389,0,1.52054421143703,0.488124115096339,4.04429388380456,4.0507097394088,10.5373679375214,6.28682243353275,5.29273958271614,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,1.01304409331664,1.05927344650575,0,0,0.560677600142307,0,0,0.622422070799533,2.02066008104532,0.653847612453835,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,1.13432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.504867548488229,0.184099797284599,0,0.710019185033229,0.403008392910561,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,2.36018566109342,1.44606617930089,1.43382164552112,1.96091499683166,0.949082476444386,1.07865046528132,1.56977172100277,0.769494313892781,0.738155454624648,1.40241773803446,0,0,3.80265104465493,0,2.95394953340702,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.352226082707465,2.16549671641611,0.462985512576611,4.18559134916116,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,4.78688609852767,2.08014873822732,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.499864955910285,0,0,0,0,0,0,3.04040744001916,0,5.01370697071708,0,0,0,0,0,9.10978977003352,1.54657762555539,1.34013012267479,2.55175500661265,0,0,0,0.736148950314839,0,0,0,0.356857977594324,0,0,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,2.27466768141793,1.36074964221213,5.82972973475776,3.08454505380579,0,0,0,0,0,0,0,0,0,0.650756789328606,2.57602529119306,0,0.247528499761764,0,0,1.6068392984416,0.580024309752732,0.308097234229289,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,1.06838442776085,0,0,0,0,1.85938219718914,0.62962469366128,0,0,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0.949138274156178,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0,0,0.818999468447914,0.141405431953713,0,0,2.65375590096488,0.438450885253763,0,0.655894752046633,0.608731130888112,0,0,0,0,0.7133421029625,0,1.47775344708365,0.658589785919804,0,0,0.288666338176536,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,7.26403683666817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.4653830253207,0,0,0,0,0.296964680832639,0,0,1.82870241333667,0,0,0,1.79323189425963,4.42054264849836,0,0,0,0.622079175323615,0,0,0,2.46608514092334,0,0,0,0.185536196323703,0,0,0.174919999992391,21.7499872630438,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0.544692317594951,0.41827123283581,12.1581408435999,0.797594390929008,0,0,0,5.74202087517455,1.64875668123352,1.06606955203727,0,0.156980256395025,0,0.451191321234361,0.392125068635479,1.00692952185506,1.13852239634511,0,0,0,0,0,0,3.89213283814692,0,0,0,0,0.471807930864739,20.8670188297685,0,0,0,0,1.18375320854817,0,0.61214552326098,3.47526187956684,0,0,0,0,0,0,0,0,0,0.391969589657511,0,3.31980669659857,0,0.290268993867255,0.365446585430928,0.0821154570532092,2.71569246167574,0,0.90392296312213,0.411125773940253,0,0.50648636764703,0,0.320635281006135,1.28071796843612,10.5899093078529,0,2.29073192331831,0,0,0,0.942776138467182,0.271808412147228,0.313808538937,0,0,0,0.547621515567972,0,3.0083580899397,0,8.37847203816763,11.6871816245959,10.0502223440754,1.19807400299395,3.43380838509257,4.9097720637212,2.88888931692923,0,0,0.787831823072237,0.988990300573997,1.14586024552114,0.295282444544246,0,2.38568906942791,0.681017030557878,0,0.137539436597234,0,0,1.5476039091159,0.485996453264197,0.335434687599266,0.945668487590378,0.681909645754975,0,0,0,5.71756261098694,10.5934715258469,0,0.542999601753713,3.45688596480507,1.63293680054705,0,0,0,0,1.02586563574658,0,1.29282956361551,0,0.171086837884329,0,0.961086713109252,2.04365596629566,1.65695622138878,0.496166021811951,0,0,0.638341257770182,450.990758993294,473.051830020835,571.028155087092,574.104976372868,0,0,0.488105059607853,0,6.30750115259078,0.887432412294818,0.807253238237985,3.32036723846954,0.874862855734746,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,5.33886732957922,0,0,0.310874401165561,0,0,1.79921244865442,0.310525913752519,0,0,0.521745061811734,0,0,0,0.545545977607678,0,0,0.796191777397232,2.80019435264208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,1.86623178009892,0,5.49906538123077,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.321146125482298,1.41696576325585,0.319267718114302,0.205116364240755,8.06629427909498,0,0.484426936895553,0,0.490738592505128,0,0,0,0,0.690359926060101,0,27.4517698474789,0.20170506870352,1.56302802246618,0,0.49131575253029,0,0.337687923091973,0,0.620060389503552,0.253663240775627,4.37579847214576,1.64477330057155,13.3977018165109,0,1.27762427639595,2.14280734351315,0.672567444437648,1.82089681270989,1.36597314810779,8.16061805496277,0,0.857440047187092,0.40781839786099,0.0657727735628491,0,0.222462803784138,2.74725824976799,0.785577949580009,0,1.82631744101899,0.647782773655864,0,1.07214816264985,5.21444918717998,0,1.91244099532837,0,0.62164849248911,0.6828739083758,0,2.58136415292167,0,0,1.27016115057279,1.14553434272025,0,0,0,0,0,51.7943069750316,18.273979620412,5.799072156691,8.74279787506451,0,0,0,0,6.37654997123489,0.301925687133347,0.463044948647668,0,0,0.245148321753905,0.471353094203252,1.57046773691956,0.891139200981258,0.8453114551668,0,0.657887425858975,0.966868319603658,0,0.71421575442263,0,0,0,1.83491713361816,0.286679166302903,0,0.0679914901909147,1.74540276136151,0,0,1.38652688589425,0,0,0,0,0,0,0,0,5.68340236636796,1.33982065078089,0,0.620597975171371,7.67642334843531,3.09483760902862,0.129177819672012,0.744896571550295,0,1.14564884900697,2.82964064541507,3.9189014621453,5.13349951627922,0.471464371102113,3.22749924267044,2.99394320891412,0,0,0,0.269475606319761,4.69281884806909,18.7029409599786,2.03448089157869,4.66029741929859,8.25222553723207,0 | |phase1_expression=1.63510541343501,4.49611100171065,8.03440103347036,2.00146596706261,10.7270662662549,0,10.1319951267324,1.89515962028049,21.6784071405866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,1.80719576192283,2.50668955317945,1.59331170856906,3.1811437882044,3.40644409211845,0.378139268656271,0,0.175669571386252,1.89919659471683,0,0,0,0,0,0,0,0,0.993812036833525,0,2.08284300964557,1.69592382577203,0.419499436209906,1.92582629358047,2.50793959844173,7.75250277507987,8.89415656716776,21.4221192169389,0,1.52054421143703,0.488124115096339,4.04429388380456,4.0507097394088,10.5373679375214,6.28682243353275,5.29273958271614,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,1.01304409331664,1.05927344650575,0,0,0.560677600142307,0,0,0.622422070799533,2.02066008104532,0.653847612453835,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,1.13432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.504867548488229,0.184099797284599,0,0.710019185033229,0.403008392910561,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,2.36018566109342,1.44606617930089,1.43382164552112,1.96091499683166,0.949082476444386,1.07865046528132,1.56977172100277,0.769494313892781,0.738155454624648,1.40241773803446,0,0,3.80265104465493,0,2.95394953340702,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.352226082707465,2.16549671641611,0.462985512576611,4.18559134916116,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,4.78688609852767,2.08014873822732,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.499864955910285,0,0,0,0,0,0,3.04040744001916,0,5.01370697071708,0,0,0,0,0,9.10978977003352,1.54657762555539,1.34013012267479,2.55175500661265,0,0,0,0.736148950314839,0,0,0,0.356857977594324,0,0,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,2.27466768141793,1.36074964221213,5.82972973475776,3.08454505380579,0,0,0,0,0,0,0,0,0,0.650756789328606,2.57602529119306,0,0.247528499761764,0,0,1.6068392984416,0.580024309752732,0.308097234229289,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,1.06838442776085,0,0,0,0,1.85938219718914,0.62962469366128,0,0,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0.949138274156178,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0,0,0.818999468447914,0.141405431953713,0,0,2.65375590096488,0.438450885253763,0,0.655894752046633,0.608731130888112,0,0,0,0,0.7133421029625,0,1.47775344708365,0.658589785919804,0,0,0.288666338176536,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,7.26403683666817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.4653830253207,0,0,0,0,0.296964680832639,0,0,1.82870241333667,0,0,0,1.79323189425963,4.42054264849836,0,0,0,0.622079175323615,0,0,0,2.46608514092334,0,0,0,0.185536196323703,0,0,0.174919999992391,21.7499872630438,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0.544692317594951,0.41827123283581,12.1581408435999,0.797594390929008,0,0,0,5.74202087517455,1.64875668123352,1.06606955203727,0,0.156980256395025,0,0.451191321234361,0.392125068635479,1.00692952185506,1.13852239634511,0,0,0,0,0,0,3.89213283814692,0,0,0,0,0.471807930864739,20.8670188297685,0,0,0,0,1.18375320854817,0,0.61214552326098,3.47526187956684,0,0,0,0,0,0,0,0,0,0.391969589657511,0,3.31980669659857,0,0.290268993867255,0.365446585430928,0.0821154570532092,2.71569246167574,0,0.90392296312213,0.411125773940253,0,0.50648636764703,0,0.320635281006135,1.28071796843612,10.5899093078529,0,2.29073192331831,0,0,0,0.942776138467182,0.271808412147228,0.313808538937,0,0,0,0.547621515567972,0,3.0083580899397,0,8.37847203816763,11.6871816245959,10.0502223440754,1.19807400299395,3.43380838509257,4.9097720637212,2.88888931692923,0,0,0.787831823072237,0.988990300573997,1.14586024552114,0.295282444544246,0,2.38568906942791,0.681017030557878,0,0.137539436597234,0,0,1.5476039091159,0.485996453264197,0.335434687599266,0.945668487590378,0.681909645754975,0,0,0,5.71756261098694,10.5934715258469,0,0.542999601753713,3.45688596480507,1.63293680054705,0,0,0,0,1.02586563574658,0,1.29282956361551,0,0.171086837884329,0,0.961086713109252,2.04365596629566,1.65695622138878,0.496166021811951,0,0,0.638341257770182,450.990758993294,473.051830020835,571.028155087092,574.104976372868,0,0,0.488105059607853,0,6.30750115259078,0.887432412294818,0.807253238237985,3.32036723846954,0.874862855734746,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,5.33886732957922,0,0,0.310874401165561,0,0,1.79921244865442,0.310525913752519,0,0,0.521745061811734,0,0,0,0.545545977607678,0,0,0.796191777397232,2.80019435264208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,1.86623178009892,0,5.49906538123077,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.321146125482298,1.41696576325585,0.319267718114302,0.205116364240755,8.06629427909498,0,0.484426936895553,0,0.490738592505128,0,0,0,0,0.690359926060101,0,27.4517698474789,0.20170506870352,1.56302802246618,0,0.49131575253029,0,0.337687923091973,0,0.620060389503552,0.253663240775627,4.37579847214576,1.64477330057155,13.3977018165109,0,1.27762427639595,2.14280734351315,0.672567444437648,1.82089681270989,1.36597314810779,8.16061805496277,0,0.857440047187092,0.40781839786099,0.0657727735628491,0,0.222462803784138,2.74725824976799,0.785577949580009,0,1.82631744101899,0.647782773655864,0,1.07214816264985,5.21444918717998,0,1.91244099532837,0,0.62164849248911,0.6828739083758,0,2.58136415292167,0,0,1.27016115057279,1.14553434272025,0,0,0,0,0,51.7943069750316,18.273979620412,5.799072156691,8.74279787506451,0,0,0,0,6.37654997123489,0.301925687133347,0.463044948647668,0,0,0.245148321753905,0.471353094203252,1.57046773691956,0.891139200981258,0.8453114551668,0,0.657887425858975,0.966868319603658,0,0.71421575442263,0,0,0,1.83491713361816,0.286679166302903,0,0.0679914901909147,1.74540276136151,0,0,1.38652688589425,0,0,0,0,0,0,0,0,5.68340236636796,1.33982065078089,0,0.620597975171371,7.67642334843531,3.09483760902862,0.129177819672012,0.744896571550295,0,1.14564884900697,2.82964064541507,3.9189014621453,5.13349951627922,0.471464371102113,3.22749924267044,2.99394320891412,0,0,0,0.269475606319761,4.69281884806909,18.7029409599786,2.03448089157869,4.66029741929859,8.25222553723207,0 | ||
|short_description=p2@PALMD | |short_description=p2@PALMD | ||
}} | }} |
Latest revision as of 03:12, 25 September 2015
Short description: | p2@PALMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PALMD_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 326bp_to_ENST00000263174_5end |
EntrezGene: | PALMD |
HGNC: | 15846 |
UniProt: | Q9NP74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.69e-12 | 15 |
endothelial cell | 5.80e-11 | 36 |
endothelial cell of vascular tree | 6.31e-11 | 24 |
meso-epithelial cell | 1.85e-09 | 45 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.37e-16 | 114 |
vessel | 8.08e-07 | 68 |