FFCP PHASE1:Hg19::chr8:110593296..110593309,-: Difference between revisions
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|id=chr8:110593296..110593309,-
|short_description=p29@SYBU
|description=CAGE_peak_29_at_SYBU_5end
|association_with_transcript=-9bp_to_ENST00000527707_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55638 | |EntrezGene=55638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |HGNC=26011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000527707_5end | |||
|cluster_id=chr8:110593296..110593309,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_29_at_SYBU_5end | |||
|id=chr8:110593296..110593309,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.56e-26;2!UBERON:0008947;7.40e-08;29!UBERON:0001041;1.25e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.46e-18!2;UBERON:0003127!4.85e-18!2;UBERON:0004119!2.66e-11!169;UBERON:0000925!2.66e-11!169;UBERON:0006595!2.66e-11!169;UBERON:0001007!5.60e-11!155;UBERON:0001555!5.60e-11!155;UBERON:0007026!5.60e-11!155;UBERON:0008947!3.63e-10!38;UBERON:0003258!3.63e-10!38;UBERON:0001004!3.71e-10!72;UBERON:0001301!4.09e-10!1;UBERON:0002171!4.87e-10!1;UBERON:0006518!4.87e-10!1;UBERON:0008949!4.87e-10!1;UBERON:0000101!4.87e-10!1;UBERON:0002167!4.87e-10!1;UBERON:0001831!6.31e-10!1;UBERON:0001567!6.31e-10!1;UBERON:0008801!6.31e-10!1;UBERON:0001736!6.88e-10!1;UBERON:0006298!6.88e-10!1;UBERON:0000065!3.83e-09!53;UBERON:0000077!1.09e-08!130;UBERON:0001041!1.29e-08!98;UBERON:0007023!1.61e-08!115;UBERON:0000078!1.10e-07!18;UBERON:0002046!1.19e-07!5;UBERON:0004117!1.19e-07!5;UBERON:0007689!1.19e-07!5;UBERON:0007123!1.19e-07!5;UBERON:0003091!1.19e-07!5;UBERON:0001048!2.44e-07!168;UBERON:0004921!2.66e-07!129;UBERON:0004185!2.66e-07!129;UBERON:0000481!4.18e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.42e-50;1!UBERON:0002171;5.12e-50;1!UBERON:0006518;5.12e-50;1!UBERON:0008949;5.12e-50;1!UBERON:0000101;5.12e-50;1!UBERON:0002167;5.12e-50;1!UBERON:0006947;8.00e-18;3!UBERON:0004054;8.00e-18;3!UBERON:0005904;1.00e-13;4!UBERON:0002048;4.96e-10;22!UBERON:0000117;4.96e-10;22!UBERON:0000171;4.96e-10;22!UBERON:0000170;4.96e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.42e-50,1;UBERON:0002171,6.58e-50,1;UBERON:0006518,6.58e-50,1;UBERON:0008949,6.58e-50,1;UBERON:0000101,6.58e-50,1;UBERON:0002167,6.58e-50,1;UBERON:0006947,8.00e-18,3;UBERON:0004054,8.00e-18,3;UBERON:0005904,1.00e-13,4;UBERON:0002048,4.96e-10,22;UBERON:0000117,4.96e-10,22;UBERON:0000171,4.96e-10,22;UBERON:0000170,4.96e-10,22;UBERON:0005597,4.96e-10,22;UBERON:0000118,4.96e-10,22;UBERON:0005177,1.11e-08,101;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0005178,7.59e-07,34;UBERON:0002224,7.59e-07,34;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9 | |||
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|short_description=p29@SYBU | |||
}} | }} |
Latest revision as of 03:51, 25 September 2015
Short description: | p29@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_SYBU_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | -9bp_to_ENST00000527707_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.42e-50 | 1 |
lower lobe of right lung | 6.58e-50 | 1 |
right lung lobe | 6.58e-50 | 1 |
lower lobe of lung | 6.58e-50 | 1 |
lobe of lung | 6.58e-50 | 1 |
right lung | 6.58e-50 | 1 |
male genital duct | 8.00e-18 | 3 |
internal male genitalia | 8.00e-18 | 3 |
duct of male reproductive system | 1.00e-13 | 4 |
lung | 4.96e-10 | 22 |
respiratory tube | 4.96e-10 | 22 |
respiration organ | 4.96e-10 | 22 |
pair of lungs | 4.96e-10 | 22 |
lung primordium | 4.96e-10 | 22 |
lung bud | 4.96e-10 | 22 |
trunk region element | 1.11e-08 | 101 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
thoracic cavity element | 7.59e-07 | 34 |
thoracic cavity | 7.59e-07 | 34 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |