FFCP PHASE1:Hg19::chr5:141337703..141337712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51294 | |EntrezGene=51294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8657 | |HGNC=8657 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPG4 | |UniProt=Q9NPG4 | ||
|association_with_transcript=1bp_to_AK027282_5end | |association_with_transcript=1bp_to_AK027282_5end | ||
|cluster_id=chr5:141337703..141337712,- | |||
|coexpression_cluster_id=C4469 | |coexpression_cluster_id=C4469 | ||
|description=CAGE_peak_4_at_PCDH12_5end | |description=CAGE_peak_4_at_PCDH12_5end | ||
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|ontology_enrichment_celltype=CL:0002139!8.08e-47!24;CL:0000115!1.13e-39!35;CL:0000071!8.23e-34!18;CL:0002546!8.23e-34!18;CL:0002078!5.60e-30!44;CL:0000213!2.00e-21!57;CL:0000215!2.00e-21!57;CL:1000413!7.72e-18!9;CL:0005020!1.54e-14!6;CL:0002138!1.54e-14!6;CL:0005022!1.54e-14!6;CL:0002544!2.75e-11!6;CL:0002543!2.17e-10!6;CL:0002144!3.99e-09!3;CL:0002618!7.30e-08!3;CL:0000222!1.79e-07!119;CL:0000076!9.35e-07!62 | |ontology_enrichment_celltype=CL:0002139!8.08e-47!24;CL:0000115!1.13e-39!35;CL:0000071!8.23e-34!18;CL:0002546!8.23e-34!18;CL:0002078!5.60e-30!44;CL:0000213!2.00e-21!57;CL:0000215!2.00e-21!57;CL:1000413!7.72e-18!9;CL:0005020!1.54e-14!6;CL:0002138!1.54e-14!6;CL:0005022!1.54e-14!6;CL:0002544!2.75e-11!6;CL:0002543!2.17e-10!6;CL:0002144!3.99e-09!3;CL:0002618!7.30e-08!3;CL:0000222!1.79e-07!119;CL:0000076!9.35e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.44e-49;18!CL:0002139;9.04e-47;24!CL:0002144;1.07e-43;3!CL:1000413;5.47e-39;9!CL:0002544;8.41e-38;6!CL:0000115;1.04e-32;36!CL:0002545;2.06e-29;2!CL:0002078;7.74e-18;45!CL:0000213;1.27e-17;58!CL:0000215;1.27e-17;58!CL:0002262;1.67e-08;2!CL:1000398;1.67e-08;2!CL:0000076;2.93e-08;63 | |ontology_enrichment_celltype_v019=CL:0000071;1.44e-49;18!CL:0002139;9.04e-47;24!CL:0002144;1.07e-43;3!CL:1000413;5.47e-39;9!CL:0002544;8.41e-38;6!CL:0000115;1.04e-32;36!CL:0002545;2.06e-29;2!CL:0002078;7.74e-18;45!CL:0000213;1.27e-17;58!CL:0000215;1.27e-17;58!CL:0002262;1.67e-08;2!CL:1000398;1.67e-08;2!CL:0000076;2.93e-08;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.23e-49,18;CL:0002546,1.23e-49,18;CL:0002139,9.30e-47,24;CL:0002144,1.43e-43,3;CL:1000413,3.83e-39,9;CL:0000115,2.83e-38,36;CL:0002544,5.48e-38,6;CL:0002078,1.87e-30,45;CL:0002545,2.22e-29,2;CL:0000213,1.98e-23,58;CL:0000215,1.98e-23,58;CL:0000076,9.13e-14,63;CL:0000222,1.05e-10,121;CL:0002262,1.61e-08,2;CL:1000398,1.61e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.44e-49;18!UBERON:0008801;2.38e-15;1!CL:0000222;5.29e-07;121 | |ontology_enrichment_development_v019=CL:0002546;1.44e-49;18!UBERON:0008801;2.38e-15;1!CL:0000222;5.29e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@PCDH12 | |short_description=p4@PCDH12 | ||
}} | }} |
Latest revision as of 05:32, 25 September 2015
Short description: | p4@PCDH12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCDH12_5end |
Coexpression cluster: | C4469_Endothelial_lung_spleen_placenta_Hepatic_adipose_skeletal |
Association with transcript: | 1bp_to_AK027282_5end |
EntrezGene: | PCDH12 |
HGNC: | 8657 |
UniProt: | Q9NPG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.23e-49 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.23e-49 | 18 |
endothelial cell of vascular tree | 9.30e-47 | 24 |
capillary endothelial cell | 1.43e-43 | 3 |
endothelial cell of artery | 3.83e-39 | 9 |
endothelial cell | 2.83e-38 | 36 |
aortic endothelial cell | 5.48e-38 | 6 |
meso-epithelial cell | 1.87e-30 | 45 |
thoracic aorta endothelial cell | 2.22e-29 | 2 |
lining cell | 1.98e-23 | 58 |
barrier cell | 1.98e-23 | 58 |
squamous epithelial cell | 9.13e-14 | 63 |
mesodermal cell | 1.05e-10 | 121 |
endothelial cell of sinusoid | 1.61e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.61e-08 | 2 |