FFCP PHASE1:Hg19::chr11:114310164..114310236,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:114310164..114310236,+
|short_description=p1@REXO2
|description=CAGE_peak_1_at_REXO2_5end
|association_with_transcript=0bp_to_ENST00000539275,ENST00000539...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25996 | |EntrezGene=25996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17851 | |HGNC=17851 | ||
|UniProt=Q9BTR4, | |TSSclassifier=strong | ||
|UniProt=Q9BTR4,F5GYG5,F5H784,F5H7P1,F5H6P8 | |||
|association_with_transcript=0bp_to_ENST00000539275,ENST00000539333,ENST00000539754,ENST00000541703,ENST00000543131,ENST00000543243,ENST00000544196_5end | |||
|cluster_id=chr11:114310164..114310236,+ | |||
|description=CAGE_peak_1_at_REXO2_5end | |||
|id=chr11:114310164..114310236,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-25!180;CL:0000057!2.13e-15!75;CL:0000222!2.33e-15!119;CL:0000220!1.96e-14!246;CL:0002321!2.42e-14!248;CL:0000680!2.58e-14!57;CL:0000056!2.58e-14!57;CL:0000355!2.58e-14!57;CL:0000187!2.58e-13!54;CL:0000393!3.26e-11!60;CL:0000211!3.26e-11!60;CL:0000183!6.48e-11!59;CL:0000192!7.65e-11!42;CL:0000514!7.65e-11!42;CL:0000548!3.88e-10!679;CL:0000004!3.88e-10!679;CL:0000255!3.88e-10!679;CL:0000359!4.73e-10!32;CL:0000012!8.42e-10!682;CL:0000144!3.61e-09!625;CL:0002371!2.88e-08!591;CL:0002334!6.36e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.66e-09;32!CL:0000192;2.97e-08;43!CL:0000187;6.46e-08;55!CL:0000134;8.43e-08;55!CL:0002334;6.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.03e-16,76;CL:0000222,8.78e-16,121;CL:0002321,9.90e-15,250;CL:0000680,1.03e-14,58;CL:0000056,1.03e-14,58;CL:0000355,1.03e-14,58;CL:0000187,1.04e-13,55;CL:0000393,1.40e-11,61;CL:0000211,1.40e-11,61;CL:0000192,3.11e-11,43;CL:0000514,3.11e-11,43;CL:0000359,4.73e-10,32;CL:0002334,6.36e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.97e-08;43!CL:0000355;7.35e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.45e-19!83;UBERON:0002329!5.45e-19!83;UBERON:0003077!5.45e-19!83;UBERON:0003059!5.45e-19!83;UBERON:0007282!5.45e-19!83;UBERON:0009618!5.45e-19!83;UBERON:0007285!5.45e-19!83;UBERON:0004290!9.76e-16!70;UBERON:0000486!1.35e-15!82;UBERON:0004872!2.16e-15!84;UBERON:0005256!5.68e-15!143;UBERON:0000490!2.02e-14!138;UBERON:0001134!3.21e-13!61;UBERON:0002036!3.21e-13!61;UBERON:0003082!3.21e-13!61;UBERON:0002100!3.90e-13!216;UBERON:0003104!7.60e-13!238;UBERON:0009142!7.60e-13!238;UBERON:0002385!1.24e-12!63;UBERON:0001015!1.24e-12!63;UBERON:0000383!1.24e-12!63;UBERON:0002049!2.09e-12!79;UBERON:0007798!2.09e-12!79;UBERON:0001009!1.57e-11!113;UBERON:0001981!1.86e-11!60;UBERON:0007500!1.86e-11!60;UBERON:0004537!1.86e-11!60;UBERON:0006965!1.86e-11!60;UBERON:0000055!2.35e-11!69;UBERON:0003102!5.13e-11!95;UBERON:0003914!6.85e-11!118;UBERON:0004535!9.85e-11!110;UBERON:0001637!1.86e-10!42;UBERON:0003509!1.86e-10!42;UBERON:0004572!1.86e-10!42;UBERON:0004923!2.69e-08!57;UBERON:0007100!3.74e-08!27;UBERON:0004573!4.25e-08!33;UBERON:0004571!4.25e-08!33;UBERON:0000948!3.22e-07!24;UBERON:0005498!3.22e-07!24;UBERON:0004140!3.22e-07!24;UBERON:0009881!3.22e-07!24;UBERON:0004141!3.22e-07!24;UBERON:0003084!3.22e-07!24;UBERON:0007005!3.22e-07!24;UBERON:0004139!3.22e-07!24;UBERON:0004291!3.22e-07!24;UBERON:0002199!4.60e-07!45;UBERON:0002416!4.60e-07!45;UBERON:0000481!7.84e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.41e-07;42!UBERON:0003509;1.41e-07;42!UBERON:0004572;1.41e-07;42!UBERON:0004573;1.79e-07;33!UBERON:0004571;1.79e-07;33!UBERON:0007100;3.34e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.99e-17,148;UBERON:0002329,3.91e-16,71;UBERON:0003059,3.91e-16,71;UBERON:0007282,3.91e-16,71;UBERON:0004290,3.91e-16,71;UBERON:0009618,3.91e-16,71;UBERON:0000486,5.56e-16,83;UBERON:0007524,5.73e-16,73;UBERON:0003077,1.65e-15,72;UBERON:0007285,1.65e-15,72;UBERON:0004872,6.32e-15,83;UBERON:0007503,3.09e-14,78;UBERON:0001134,1.32e-13,62;UBERON:0002036,1.32e-13,62;UBERON:0003082,1.32e-13,62;UBERON:0003104,1.85e-13,160;UBERON:0009142,1.85e-13,160;UBERON:0002385,5.19e-13,64;UBERON:0001015,5.19e-13,64;UBERON:0000383,5.19e-13,64;UBERON:0005256,5.42e-13,122;UBERON:0003102,1.04e-12,99;UBERON:0002049,5.67e-12,78;UBERON:0007798,5.67e-12,78;UBERON:0001009,3.77e-11,112;UBERON:0007500,5.29e-11,59;UBERON:0001981,5.29e-11,59;UBERON:0004537,5.29e-11,59;UBERON:0006965,5.29e-11,59;UBERON:0000055,6.39e-11,68;UBERON:0002100,8.99e-11,199;UBERON:0003914,1.39e-10,117;UBERON:0001637,1.86e-10,42;UBERON:0003509,1.86e-10,42;UBERON:0004572,1.86e-10,42;UBERON:0004535,2.32e-10,109;UBERON:0004923,4.57e-10,66;UBERON:0007100,3.74e-08,27;UBERON:0004573,4.25e-08,33;UBERON:0004571,4.25e-08,33;UBERON:0002199,1.89e-07,46;UBERON:0002416,1.89e-07,46;UBERON:0000948,3.22e-07,24;UBERON:0005498,3.22e-07,24;UBERON:0004140,3.22e-07,24;UBERON:0009881,3.22e-07,24;UBERON:0004141,3.22e-07,24;UBERON:0003084,3.22e-07,24;UBERON:0007005,3.22e-07,24;UBERON:0004139,3.22e-07,24;UBERON:0004291,3.22e-07,24 | |||
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| ||
|short_description=p1@REXO2 | |||
}} | }} |
Latest revision as of 07:28, 25 September 2015
Short description: | p1@REXO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REXO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539275, ENST00000539333, ENST00000539754, ENST00000541703, ENST00000543131, ENST00000543243, ENST00000544196_5end |
EntrezGene: | REXO2 |
HGNC: | 17851 |
UniProt: | Q9BTR4F5GYG5F5H784F5H7P1F5H6P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.03e-16 | 76 |
mesodermal cell | 8.78e-16 | 121 |
embryonic cell | 9.90e-15 | 250 |
muscle precursor cell | 1.03e-14 | 58 |
myoblast | 1.03e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-14 | 58 |
muscle cell | 1.04e-13 | 55 |
electrically responsive cell | 1.40e-11 | 61 |
electrically active cell | 1.40e-11 | 61 |
smooth muscle cell | 3.11e-11 | 43 |
smooth muscle myoblast | 3.11e-11 | 43 |
vascular associated smooth muscle cell | 4.73e-10 | 32 |
preadipocyte | 6.36e-07 | 12 |