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FFCP PHASE1:Mm9::chr5:136108508..136108517,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:136108508..136108517,+
|DHSsupport=NA
|short_description=p4@Rhbdd2
|DPIdataset=NA
|description=CAGE_peak_4_at_Rhbdd2_5end
|association_with_transcript=-6bp_to_ENSMUST00000136748,NM_146002,uc008zyp.1,uc008zyq.1,uc008zyr.1,uc008zys.1_5end
|EntrezGene=215160
|EntrezGene=215160
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D6RCZ4,Q8VEK2
|UniProt=D6RCZ4,Q8VEK2
|association_with_transcript=-6bp_to_ENSMUST00000136748,NM_146002,uc008zyp.1,uc008zyq.1,uc008zyr.1,uc008zys.1_5end
|cluster_id=chr5:136108508..136108517,+
|description=CAGE_peak_4_at_Rhbdd2_5end
|id=chr5:136108508..136108517,+
|ontology_enrichment_celltype=CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0000221!1.22e-08!44;CL:0000133!1.22e-08!44;CL:0000540!1.39e-08!33;CL:0000047!1.39e-08!33;CL:0000031!1.39e-08!33;CL:0000404!1.39e-08!33;CL:0002319!2.29e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-19,23;CL:0000337,3.69e-19,23;CL:0000540,1.55e-12,33;CL:0000047,1.55e-12,33;CL:0000031,1.55e-12,33;CL:0000404,1.55e-12,33;CL:0000393,3.37e-10,39;CL:0000211,3.37e-10,39;CL:0002610,5.39e-10,3;CL:0002614,2.37e-09,3;CL:0002319,5.26e-09,43;CL:0000120,7.64e-09,3;CL:0000221,9.67e-09,44;CL:0000133,9.67e-09,44;CL:0002611,4.31e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.62e-21!102;UBERON:0000924!9.62e-21!102;UBERON:0006601!9.62e-21!102;UBERON:0000073!4.35e-19!75;UBERON:0001016!4.35e-19!75;UBERON:0001017!5.39e-19!73;UBERON:0005743!5.39e-19!73;UBERON:0002346!3.78e-17!71;UBERON:0003075!3.78e-17!71;UBERON:0007284!3.78e-17!71;UBERON:0001049!5.31e-17!52;UBERON:0005068!5.31e-17!52;UBERON:0006241!5.31e-17!52;UBERON:0007135!5.31e-17!52;UBERON:0002616!6.23e-15!49;UBERON:0000033!7.37e-15!63;UBERON:0000955!2.69e-14!50;UBERON:0006238!2.69e-14!50;UBERON:0002020!1.12e-13!34;UBERON:0003080!1.26e-10!40;UBERON:0002791!3.19e-10!29;UBERON:0003528!3.19e-10!29;UBERON:0001893!3.19e-10!29;UBERON:0002780!6.13e-10!39;UBERON:0001890!6.13e-10!39;UBERON:0006240!6.13e-10!39;UBERON:0003056!6.44e-10!49;UBERON:0003076!9.04e-08!12;UBERON:0003057!9.04e-08!12;UBERON:0007811!3.00e-07!86;UBERON:0000956!3.66e-07!21;UBERON:0001869!3.66e-07!21;UBERON:0000203!3.66e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-29,54;UBERON:0001017,7.18e-29,73;UBERON:0001016,5.86e-28,75;UBERON:0001049,2.03e-25,52;UBERON:0005068,2.03e-25,52;UBERON:0006241,2.03e-25,52;UBERON:0007135,2.03e-25,52;UBERON:0004121,6.12e-21,95;UBERON:0000924,6.12e-21,95;UBERON:0006601,6.12e-21,95;UBERON:0002020,9.46e-21,34;UBERON:0002346,9.33e-20,64;UBERON:0003075,9.33e-20,64;UBERON:0007284,9.33e-20,64;UBERON:0010371,9.94e-17,73;UBERON:0002616,1.04e-16,46;UBERON:0000955,2.84e-16,47;UBERON:0006238,2.84e-16,47;UBERON:0003080,5.32e-15,40;UBERON:0003528,9.14e-14,29;UBERON:0002791,9.14e-14,29;UBERON:0001893,9.14e-14,29;UBERON:0002780,2.84e-13,39;UBERON:0001890,2.84e-13,39;UBERON:0006240,2.84e-13,39;UBERON:0002240,8.83e-13,6;UBERON:0005174,8.83e-13,6;UBERON:0001137,8.83e-13,6;UBERON:0002021,1.71e-12,10;UBERON:0000411,1.71e-12,10;UBERON:0001950,1.71e-12,10;UBERON:0002950,2.67e-12,4;UBERON:0001891,2.67e-12,4;UBERON:0009616,2.67e-12,4;UBERON:0010286,2.67e-12,4;UBERON:0010314,2.79e-12,92;UBERON:0003076,5.53e-12,12;UBERON:0003057,5.53e-12,12;UBERON:0003056,1.25e-11,49;UBERON:0004684,5.39e-10,3;UBERON:0002275,5.39e-10,3;UBERON:0001948,6.41e-10,5;UBERON:0002315,6.41e-10,5;UBERON:0002038,2.37e-09,3;UBERON:0009663,2.37e-09,3;UBERON:0009661,2.37e-09,3;UBERON:0000125,2.37e-09,3;UBERON:0002308,2.37e-09,3;UBERON:0000956,3.11e-09,21;UBERON:0001869,3.11e-09,21;UBERON:0000203,3.11e-09,21;UBERON:0002619,3.79e-09,17;UBERON:0000025,5.55e-09,114;UBERON:0004111,4.45e-08,122;UBERON:0001896,1.74e-07,2;UBERON:0002298,1.74e-07,2;UBERON:0005290,1.74e-07,2;UBERON:0010096,1.74e-07,2;UBERON:0011216,2.13e-07,194;UBERON:0002256,4.31e-07,2
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0.202753862439029,0,0.782391344348039,0,0,0.58328969722285,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0,0.210324961351382,2.28520787523043,1.54607978666129,0.367472397644862,0.479227355091182,0,2.20231761998777,1.53224805702225,2.76491759861238,0.791317726381163,0.182975287204819,0,1.95428099300967,1.12552522006336,1.83357897332172,1.76777151284201,1.70846016958924,0.931997229126503,0.075726193333184,0.151143120213571,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0.506719730950197,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0.127070227073065,2.69623150928681,1.37250180845588,0.628271760564322,1.91206752211504,1.27857728665165,2.28566849015516,1.46017136760982,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.640568601424249,0,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0,0.324275238183423,0,0,0,1.47202963994889,0.205809224758569,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.469380496577004,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,2.10981035865966,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0.849229592366497,0.404810701674894,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.532020700926821,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,2.78137953015765,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,2.25477175473676,0,0,0,0,0,0.117357238645754,0,0.314578033277133,0.483168241652012,0.576060012515731,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,0.19318959403219,0,0,0,0.501572104035363,1.12950368523413,0.920650473014354,0,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.384150914429216,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.685738504770831,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0.202753862439029,0,0.782391344348039,0,0,0.58328969722285,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0,0.210324961351382,2.28520787523043,1.54607978666129,0.367472397644862,0.479227355091182,0,2.20231761998777,1.53224805702225,2.76491759861238,0.791317726381163,0.182975287204819,0,1.95428099300967,1.12552522006336,1.83357897332172,1.76777151284201,1.70846016958924,0.931997229126503,0.075726193333184,0.151143120213571,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0.506719730950197,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0.127070227073065,2.69623150928681,1.37250180845588,0.628271760564322,1.91206752211504,1.27857728665165,2.28566849015516,1.46017136760982,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0.640568601424249,0,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0,0.324275238183423,0,0,0,1.47202963994889,0.205809224758569,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.469380496577004,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,2.10981035865966,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0.849229592366497,0.404810701674894,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.532020700926821,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,2.78137953015765,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,2.25477175473676,0,0,0,0,0,0.117357238645754,0,0.314578033277133,0.483168241652012,0.576060012515731,0,0.202725215290164,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.503653849092235,0.19318959403219,0,0,0,0.501572104035363,1.12950368523413,0.920650473014354,0,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,1.80128481289688,1.35942722695261,1.03552062350364,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.384150914429216,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.685738504770831,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0
|short_description=p4@Rhbdd2
}}
}}

Latest revision as of 13:28, 25 September 2015

Short description:p4@Rhbdd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rhbdd2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -6bp_to_ENSMUST00000136748, NM_146002, uc008zyp.1, uc008zyq.1, uc008zyr.1, uc008zys.1_5end
EntrezGene:Rhbdd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rhbdd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.09e-2954
central nervous system7.18e-2973
nervous system5.86e-2875
neural tube2.03e-2552
neural rod2.03e-2552
future spinal cord2.03e-2552
neural keel2.03e-2552
ectoderm-derived structure6.12e-2195
ectoderm6.12e-2195
presumptive ectoderm6.12e-2195
gray matter9.46e-2134
neurectoderm9.33e-2064
neural plate9.33e-2064
presumptive neural plate9.33e-2064
ecto-epithelium9.94e-1773
regional part of brain1.04e-1646
brain2.84e-1647
future brain2.84e-1647
anterior neural tube5.32e-1540
brain grey matter9.14e-1429
regional part of telencephalon9.14e-1429
telencephalon9.14e-1429
regional part of forebrain2.84e-1339
forebrain2.84e-1339
future forebrain2.84e-1339
spinal cord8.83e-136
dorsal region element8.83e-136
dorsum8.83e-136
occipital lobe1.71e-1210
visual cortex1.71e-1210
neocortex1.71e-1210
regional part of midbrain2.67e-124
midbrain2.67e-124
presumptive midbrain2.67e-124
midbrain neural tube2.67e-124
structure with developmental contribution from neural crest2.79e-1292
posterior neural tube5.53e-1212
chordal neural plate5.53e-1212
pre-chordal neural plate1.25e-1149
raphe nuclei5.39e-103
reticular formation5.39e-103
regional part of spinal cord6.41e-105
gray matter of spinal cord6.41e-105
substantia nigra2.37e-093
telencephalic nucleus2.37e-093
midbrain nucleus2.37e-093
neural nucleus2.37e-093
nucleus of brain2.37e-093
cerebral cortex3.11e-0921
cerebral hemisphere3.11e-0921
pallium3.11e-0921
regional part of cerebral cortex3.79e-0917
tube5.55e-09114
anatomical conduit4.45e-08122
medulla oblongata1.74e-072
brainstem1.74e-072
myelencephalon1.74e-072
future myelencephalon1.74e-072
organ system subdivision2.13e-07194
dorsal horn of spinal cord4.31e-072
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