FFCP PHASE1:Mm9::chr2:119063414..119063446,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:119063414..119063446,+
|short_description=p5@Spint1
|description=CAGE_peak_5_at_Spint1_5end
|association_with_transcript=125bp_to_ENSMUST00000110817_5end
...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20732 | |EntrezGene=20732 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R097 | |UniProt=Q9R097 | ||
|association_with_transcript=125bp_to_ENSMUST00000110817_5end | |||
|cluster_id=chr2:119063414..119063446,+ | |||
|description=CAGE_peak_5_at_Spint1_5end | |||
|id=chr2:119063414..119063446,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.03e-07!9;CL:0002251!6.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.43e-08,9;CL:0002251,1.43e-08,9;CL:0000066,3.43e-08,25;CL:0000075,1.25e-07,7;CL:0000239,4.29e-07,6;CL:0000677,4.29e-07,6;CL:0000584,4.29e-07,6;CL:0002076,6.85e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.23e-24!43;UBERON:0005409!4.02e-21!59;UBERON:0004119!1.46e-14!130;UBERON:0000925!1.46e-14!130;UBERON:0006595!1.46e-14!130;UBERON:0001007!2.97e-14!128;UBERON:0001555!2.97e-14!128;UBERON:0007026!2.97e-14!128;UBERON:0004921!3.91e-13!126;UBERON:0004185!3.91e-13!126;UBERON:0000344!3.28e-11!15;UBERON:0001242!8.81e-10!13;UBERON:0000060!8.81e-10!13;UBERON:0001262!8.81e-10!13;UBERON:0004786!8.81e-10!13;UBERON:0002108!1.14e-08!16;UBERON:0000485!1.04e-07!11;UBERON:0003350!6.03e-07!9;UBERON:0004808!6.03e-07!9;UBERON:0001277!6.03e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.01e-23,31;UBERON:0005409,2.09e-20,47;UBERON:0000344,4.17e-14,15;UBERON:0001242,3.00e-12,13;UBERON:0001262,3.00e-12,13;UBERON:0004786,3.00e-12,13;UBERON:0004119,1.79e-10,118;UBERON:0000925,1.79e-10,118;UBERON:0006595,1.79e-10,118;UBERON:0001007,2.30e-10,116;UBERON:0001555,2.30e-10,116;UBERON:0007026,2.30e-10,116;UBERON:0000485,1.46e-09,11;UBERON:0004921,2.90e-09,114;UBERON:0004923,8.32e-09,24;UBERON:0003350,1.43e-08,9;UBERON:0004808,1.43e-08,9;UBERON:0001277,1.43e-08,9;UBERON:0001264,2.11e-07,12 | |||
|phase1_expression=3.20297694209588,67.0032782667573,79.6248668931688,87.7146212789807,93.1666057700206,30.2182689441402,28.7343547932497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,47.8377344152286,63.5463708556061,53.9778046268119,61.1682034545886,42.663304071806,90.451147661234,60.4872311423834,51.663208982686,0,0,0,4.91047753577167,4.15586613396231,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.79728977403356,0,0,0,0,0,5.61777680527007,0,0,0,4.92951969218382,0,0,0,2.59789249213457,2.53359865475099,4.04419556011827,10.0481814152773,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,29.4162011603905,0,0,0,0,0,24.2309289583559,0,0,23.757506134399,0,0,0,0,0.915001205637253,0,0,0,0,0.486723789203273,0.611036183101898,1.7416975885413,5.81262344397452,3.36706969418358,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.136072998302656,0.768682321709099,0.187403449119458,1.81092359517311,0,0,0.175951124163949,0.657587197282725,0,0.696504333044333,1.02891068203972,1.19420560091096,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,33.3722970813636,22.2138475997377,0.213288250535234,1.16118335930219,2.44848176511977,4.84040459096022,7.56085349072559,11.4135375667535,20.404749646414,20.2579714310533,16.0854533632172,18.9008648439093,16.7669114922443,19.7740269903929,17.2910439899755,21.706398784726,1.13800740571849,1.02823661348756,2.25415471346161,1.62921062276251,1.74557238450863,2.31448205638051,3.41477300470989,6.4948465111025,3.1399745568275,3.94870924549762,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.47802552133284,0.568474235311454,0.162964976442026,0.509235257325564,0.234690248288502,2.1775813467436,2.38043640886014,2.73187107000918,1.10344600874334,1.32878813789265,0.797273843287435,1.3109065177259,1.55416483679306,1.59113964439663,0,0,2.95058563811422,2.20749397043786,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.709700426041343,0.712262414669021,0.81443479676788,1.31976098378028,2.65490276679926,3.8844901784797,3.02323556964751,3.77210159511796,7.38254732201932,4.91896236710284,8.5281336745513,2.90826983582004,2.13898427030833,3.16036757935816,3.16255825724996,7.21948802737308,6.80879211507576,0.36012218806262,1.81102157295856,1.07168517515796,1.77340233642274,2.85390108163313,2.13913726782757,5.17590413494819,0.23467170806371,2.96564899209348,2.42581237860458,1.48397627647332,1.61464426695906,0.965006798850494,1.19372344003136,2.79039529566604,15.4484843413821,0,0.170870880797853,0,0,0,0,0,0,0,0.552799895217695,7.63736494412091,0,0.609958401380546,2.48412283890143,5.01811910434725,3.05707589244649,2.96701562046606,3.55409859618945,3.92633912976044,13.2207272757629,11.1841076355647,0,0,0,0.388902376688095,0.516639293910924,0.337912250981556,0.117357238645754,0.39061315453185,1.25831213310853,0.241584120826006,0,0.316011120628178,0.608175645870493,1.33524244314275,1.03936658382236,0.537080087002444,0.596044064343795,1.32214994471966,0.147689527174577,0.605798699688886,0.762068066549998,0.302478555410522,0.682205165178267,0.577271049841977,0.701261413089414,6.57518112484113,2.88581739386284,0.179427713218951,2.3503846290971,4.63655025677257,4.129014459926,1.83151624267265,5.35920947697665,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,1.33348036680969,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.704276676453562,0.459483751644906,0.952587382566147,0.811190281613988,0.964546102318525,0,1.03039244094078,1.71434626192708,0.887379030796687,0.476872379894642,1.45346416632329,1.12931256498397,1.09998990259179,0.73171189149109,1.05227884575137,0.814824683075171,0,0.949080144993393,0.886540341380071,0.409231043169689,0.619747364743864,1.15743966588685,0.249810577937946,2.10538447600868,1.93383948643468,0.765153328275374,0.882365676478062,0.463735671240843 | |phase1_expression=3.20297694209588,67.0032782667573,79.6248668931688,87.7146212789807,93.1666057700206,30.2182689441402,28.7343547932497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,47.8377344152286,63.5463708556061,53.9778046268119,61.1682034545886,42.663304071806,90.451147661234,60.4872311423834,51.663208982686,0,0,0,4.91047753577167,4.15586613396231,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.79728977403356,0,0,0,0,0,5.61777680527007,0,0,0,4.92951969218382,0,0,0,2.59789249213457,2.53359865475099,4.04419556011827,10.0481814152773,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,29.4162011603905,0,0,0,0,0,24.2309289583559,0,0,23.757506134399,0,0,0,0,0.915001205637253,0,0,0,0,0.486723789203273,0.611036183101898,1.7416975885413,5.81262344397452,3.36706969418358,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.136072998302656,0.768682321709099,0.187403449119458,1.81092359517311,0,0,0.175951124163949,0.657587197282725,0,0.696504333044333,1.02891068203972,1.19420560091096,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,33.3722970813636,22.2138475997377,0.213288250535234,1.16118335930219,2.44848176511977,4.84040459096022,7.56085349072559,11.4135375667535,20.404749646414,20.2579714310533,16.0854533632172,18.9008648439093,16.7669114922443,19.7740269903929,17.2910439899755,21.706398784726,1.13800740571849,1.02823661348756,2.25415471346161,1.62921062276251,1.74557238450863,2.31448205638051,3.41477300470989,6.4948465111025,3.1399745568275,3.94870924549762,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.47802552133284,0.568474235311454,0.162964976442026,0.509235257325564,0.234690248288502,2.1775813467436,2.38043640886014,2.73187107000918,1.10344600874334,1.32878813789265,0.797273843287435,1.3109065177259,1.55416483679306,1.59113964439663,0,0,2.95058563811422,2.20749397043786,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.709700426041343,0.712262414669021,0.81443479676788,1.31976098378028,2.65490276679926,3.8844901784797,3.02323556964751,3.77210159511796,7.38254732201932,4.91896236710284,8.5281336745513,2.90826983582004,2.13898427030833,3.16036757935816,3.16255825724996,7.21948802737308,6.80879211507576,0.36012218806262,1.81102157295856,1.07168517515796,1.77340233642274,2.85390108163313,2.13913726782757,5.17590413494819,0.23467170806371,2.96564899209348,2.42581237860458,1.48397627647332,1.61464426695906,0.965006798850494,1.19372344003136,2.79039529566604,15.4484843413821,0,0.170870880797853,0,0,0,0,0,0,0,0.552799895217695,7.63736494412091,0,0.609958401380546,2.48412283890143,5.01811910434725,3.05707589244649,2.96701562046606,3.55409859618945,3.92633912976044,13.2207272757629,11.1841076355647,0,0,0,0.388902376688095,0.516639293910924,0.337912250981556,0.117357238645754,0.39061315453185,1.25831213310853,0.241584120826006,0,0.316011120628178,0.608175645870493,1.33524244314275,1.03936658382236,0.537080087002444,0.596044064343795,1.32214994471966,0.147689527174577,0.605798699688886,0.762068066549998,0.302478555410522,0.682205165178267,0.577271049841977,0.701261413089414,6.57518112484113,2.88581739386284,0.179427713218951,2.3503846290971,4.63655025677257,4.129014459926,1.83151624267265,5.35920947697665,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,1.33348036680969,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.704276676453562,0.459483751644906,0.952587382566147,0.811190281613988,0.964546102318525,0,1.03039244094078,1.71434626192708,0.887379030796687,0.476872379894642,1.45346416632329,1.12931256498397,1.09998990259179,0.73171189149109,1.05227884575137,0.814824683075171,0,0.949080144993393,0.886540341380071,0.409231043169689,0.619747364743864,1.15743966588685,0.249810577937946,2.10538447600868,1.93383948643468,0.765153328275374,0.882365676478062,0.463735671240843 | ||
|short_description=p5@Spint1 | |||
}} | }} |
Latest revision as of 14:04, 25 September 2015
Short description: | p5@Spint1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Spint1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 125bp_to_ENSMUST00000110817_5end |
EntrezGene: | Spint1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.43e-08 | 9 |
epithelial cell of alimentary canal | 1.43e-08 | 9 |
epithelial cell | 3.43e-08 | 25 |
columnar/cuboidal epithelial cell | 1.25e-07 | 7 |
brush border epithelial cell | 4.29e-07 | 6 |
gut absorptive cell | 4.29e-07 | 6 |
enterocyte | 4.29e-07 | 6 |
endo-epithelial cell | 6.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.01e-23 | 31 |
gastrointestinal system | 2.09e-20 | 47 |
mucosa | 4.17e-14 | 15 |
intestinal mucosa | 3.00e-12 | 13 |
wall of intestine | 3.00e-12 | 13 |
gastrointestinal system mucosa | 3.00e-12 | 13 |
endoderm-derived structure | 1.79e-10 | 118 |
endoderm | 1.79e-10 | 118 |
presumptive endoderm | 1.79e-10 | 118 |
digestive system | 2.30e-10 | 116 |
digestive tract | 2.30e-10 | 116 |
primitive gut | 2.30e-10 | 116 |
simple columnar epithelium | 1.46e-09 | 11 |
subdivision of digestive tract | 2.90e-09 | 114 |
organ component layer | 8.32e-09 | 24 |
epithelium of mucosa | 1.43e-08 | 9 |
gastrointestinal system epithelium | 1.43e-08 | 9 |
intestinal epithelium | 1.43e-08 | 9 |
pancreas | 2.11e-07 | 12 |