FFCP PHASE1:Mm9::chr16:4756879..4756881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15369 | |EntrezGene=15369 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=309 | |||
|TSSclassifier=NA | |||
|UniProt=O70252 | |UniProt=O70252 | ||
|association_with_transcript=-21bp_to_ENSMUST00000118885_5end | |association_with_transcript=-21bp_to_ENSMUST00000118885_5end | ||
|cluster_id=chr16:4756879..4756881,+ | |||
|description=CAGE_peak_7_at_Hmox2_5end | |description=CAGE_peak_7_at_Hmox2_5end | ||
|id=chr16:4756879..4756881,+ | |id=chr16:4756879..4756881,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.00e-21!6;CL:0000677!1.00e-21!6;CL:0000212!1.00e-21!6;CL:0000584!1.00e-21!6;CL:0002563!3.55e-20!9;CL:0002251!3.55e-20!9;CL:0000075!1.30e-18!7;CL:0000063!3.97e-17!66;CL:0000066!2.49e-15!25;CL:0002076!6.08e-12!15;CL:0000223!7.33e-12!20;CL:0000548!3.61e-10!115;CL:0000004!3.61e-10!115;CL:0000255!3.61e-10!115;CL:0002371!7.55e-10!118;CL:0000144!1.53e-09!121;CL:0000012!1.53e-09!121;CL:0000473!1.32e-07!3;CL:0000627!1.32e-07!3;CL:0000682!1.32e-07!3 | |ontology_enrichment_celltype=CL:0000239!1.00e-21!6;CL:0000677!1.00e-21!6;CL:0000212!1.00e-21!6;CL:0000584!1.00e-21!6;CL:0002563!3.55e-20!9;CL:0002251!3.55e-20!9;CL:0000075!1.30e-18!7;CL:0000063!3.97e-17!66;CL:0000066!2.49e-15!25;CL:0002076!6.08e-12!15;CL:0000223!7.33e-12!20;CL:0000548!3.61e-10!115;CL:0000004!3.61e-10!115;CL:0000255!3.61e-10!115;CL:0002371!7.55e-10!118;CL:0000144!1.53e-09!121;CL:0000012!1.53e-09!121;CL:0000473!1.32e-07!3;CL:0000627!1.32e-07!3;CL:0000682!1.32e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.62e-33,6;CL:0000677,2.62e-33,6;CL:0000584,2.62e-33,6;CL:0000075,1.03e-28,7;CL:0000057,8.39e-23,1;CL:0000632,8.39e-23,1;CL:0002563,1.40e-22,9;CL:0002251,1.40e-22,9;CL:0002076,5.92e-14,15;CL:0000223,1.07e-10,20;CL:0000066,9.87e-09,25;CL:0000151,1.59e-08,3;CL:0000499,1.59e-08,3;CL:0000327,1.59e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.55e-20!9;UBERON:0004808!3.55e-20!9;UBERON:0001277!3.55e-20!9;UBERON:0000485!1.94e-16!11;UBERON:0001242!7.59e-14!13;UBERON:0000060!7.59e-14!13;UBERON:0001262!7.59e-14!13;UBERON:0004786!7.59e-14!13;UBERON:0000344!6.08e-12!15;UBERON:0004923!2.76e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.40e-22,9;UBERON:0004808,1.40e-22,9;UBERON:0001277,1.40e-22,9;UBERON:0000485,1.15e-18,11;UBERON:0001242,5.98e-16,13;UBERON:0001262,5.98e-16,13;UBERON:0004786,5.98e-16,13;UBERON:0000344,5.92e-14,15;UBERON:0004923,4.63e-09,24;UBERON:0000160,3.36e-07,31;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,3.0246421130683,9.5170188689806,0,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,3.0246421130683,9.5170188689806,0,1.40167584357315,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Hmox2 | |short_description=p7@Hmox2 | ||
}} | }} |
Latest revision as of 14:44, 25 September 2015
Short description: | p7@Hmox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hmox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | -21bp_to_ENSMUST00000118885_5end |
EntrezGene: | Hmox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.62e-33 | 6 |
gut absorptive cell | 2.62e-33 | 6 |
enterocyte | 2.62e-33 | 6 |
columnar/cuboidal epithelial cell | 1.03e-28 | 7 |
fibroblast | 8.39e-23 | 1 |
hepatic stellate cell | 8.39e-23 | 1 |
intestinal epithelial cell | 1.40e-22 | 9 |
epithelial cell of alimentary canal | 1.40e-22 | 9 |
endo-epithelial cell | 5.92e-14 | 15 |
endodermal cell | 1.07e-10 | 20 |
epithelial cell | 9.87e-09 | 25 |
secretory cell | 1.59e-08 | 3 |
stromal cell | 1.59e-08 | 3 |
extracellular matrix secreting cell | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.40e-22 | 9 |
gastrointestinal system epithelium | 1.40e-22 | 9 |
intestinal epithelium | 1.40e-22 | 9 |
simple columnar epithelium | 1.15e-18 | 11 |
intestinal mucosa | 5.98e-16 | 13 |
wall of intestine | 5.98e-16 | 13 |
gastrointestinal system mucosa | 5.98e-16 | 13 |
mucosa | 5.92e-14 | 15 |
organ component layer | 4.63e-09 | 24 |
intestine | 3.36e-07 | 31 |
gut epithelium | 3.83e-07 | 55 |