FFCP PHASE1:Mm9::chr2:120911514..120911530,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74176 | |EntrezGene=74176 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=75 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7I9 | |UniProt=Q9D7I9 | ||
|association_with_transcript=-19bp_to_NM_028799,uc008lxl.1,uc008lxm.1,uc012cck.1_5end | |association_with_transcript=-19bp_to_NM_028799,uc008lxl.1,uc008lxm.1,uc012cck.1_5end | ||
|cluster_id=chr2:120911514..120911530,- | |||
|description=CAGE_peak_1_at_Tgm5_5end | |description=CAGE_peak_1_at_Tgm5_5end | ||
|id=chr2:120911514..120911530,- | |id=chr2:120911514..120911530,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!2.15e-07!5;UBERON:0001003!2.15e-07!5;UBERON:0002097!2.15e-07!5;UBERON:0002199!2.15e-07!5;UBERON:0007029!2.15e-07!5;UBERON:0007376!2.15e-07!5;UBERON:0002416!2.15e-07!5;UBERON:0007383!2.15e-07!5 | |ontology_enrichment_uberon=UBERON:0000014!2.15e-07!5;UBERON:0001003!2.15e-07!5;UBERON:0002097!2.15e-07!5;UBERON:0002199!2.15e-07!5;UBERON:0007029!2.15e-07!5;UBERON:0007376!2.15e-07!5;UBERON:0002416!2.15e-07!5;UBERON:0007383!2.15e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.13e-20,5;UBERON:0001003,1.13e-20,5;UBERON:0002097,1.13e-20,5;UBERON:0002199,1.13e-20,5;UBERON:0007029,1.13e-20,5;UBERON:0007376,1.13e-20,5;UBERON:0002416,1.13e-20,5;UBERON:0007383,1.13e-20,5;UBERON:0003102,2.90e-17,22;UBERON:0000165,1.66e-09,2;UBERON:0000166,1.66e-09,2;UBERON:0000930,1.66e-09,2;UBERON:0000161,2.81e-08,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,1.1930122580464,1.55871602761721,1.06001872353102,0,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,0.101839363850316,0,0,1.05220927943237,0,0.229902104433473,0,0.30140963567143,0,0,0.0937017245597288,1.55222022443409,0,0,0,0.219195732427575,0,1.74126083261083,3.90986059175093,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,0.685491075658373,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0,14.6748765117917,8.23468576149118,5.06628569396509,7.16234064018819,7.38634048852776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,1.04544148007234,0.655087691238533,1.07891477107857,0.578574190077352,2.87931536182433,0,8.69875038321696,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,16.5513180039104,0,0,0,0,0,0.915758121336325,32.1552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0,0.256100609619477,0.229741875822453,0.952587382566147,0.579421629724277,0.77163688185482,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.407412341537585,0.561142271657738,0.474540072496697,0.591026894253381,0,0.464810523557898,0.578719832943424,0.999242311751784,1.63752125911786,1.71896843238639,0.382576664137687,1.10295709559758,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,1.1930122580464,1.55871602761721,1.06001872353102,0,0,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,0.101839363850316,0,0,1.05220927943237,0,0.229902104433473,0,0.30140963567143,0,0,0.0937017245597288,1.55222022443409,0,0,0,0.219195732427575,0,1.74126083261083,3.90986059175093,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,0.685491075658373,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0,14.6748765117917,8.23468576149118,5.06628569396509,7.16234064018819,7.38634048852776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,1.04544148007234,0.655087691238533,1.07891477107857,0.578574190077352,2.87931536182433,0,8.69875038321696,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,16.5513180039104,0,0,0,0,0,0.915758121336325,32.1552568618599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0,0.256100609619477,0.229741875822453,0.952587382566147,0.579421629724277,0.77163688185482,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.407412341537585,0.561142271657738,0.474540072496697,0.591026894253381,0,0.464810523557898,0.578719832943424,0.999242311751784,1.63752125911786,1.71896843238639,0.382576664137687,1.10295709559758,0 | ||
|short_description=p1@Tgm5 | |short_description=p1@Tgm5 | ||
}} | }} |
Latest revision as of 14:44, 25 September 2015
Short description: | p1@Tgm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tgm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:75 |
Association with transcript: | -19bp_to_NM_028799, uc008lxl.1, uc008lxm.1, uc012cck.1_5end |
EntrezGene: | Tgm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.13e-20 | 5 |
skin epidermis | 1.13e-20 | 5 |
skin of body | 1.13e-20 | 5 |
integument | 1.13e-20 | 5 |
surface | 1.13e-20 | 5 |
outer epithelium | 1.13e-20 | 5 |
integumental system | 1.13e-20 | 5 |
enveloping layer of ectoderm | 1.13e-20 | 5 |
surface structure | 2.90e-17 | 22 |
mouth | 1.66e-09 | 2 |
oral opening | 1.66e-09 | 2 |
stomodeum | 1.66e-09 | 2 |
orifice | 2.81e-08 | 5 |