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FFCP PHASE1:Mm9::chr10:115910601..115910617,-: Difference between revisions

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{{FFCP|EntrezGene=58802|HGNC=|MCL_coexpression_id=0|UniProt=Q9JIN6|association_with_transcript=-22bp_to_NM_021452,uc007hbw.1,uc007hby.1_5end|description=CAGE_peak_5_at_Kcnmb4_5end|id=chr10:115910601..115910617,-|ontology_enrichment_celltype=CL:0000117!6.52e-09!23;CL:0000337!6.52e-09!23;CL:0000540!2.67e-08!33;CL:0000047!2.67e-08!33;CL:0000031!2.67e-08!33;CL:0000404!2.67e-08!33;CL:0000221!3.31e-07!44;CL:0000133!3.31e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-16,23;CL:0000337,4.54e-16,23;CL:0000540,1.30e-12,33;CL:0000047,1.30e-12,33;CL:0000031,1.30e-12,33;CL:0000404,1.30e-12,33;CL:0002612,1.34e-11,3;CL:0000221,1.51e-10,44;CL:0000133,1.51e-10,44;CL:0000393,2.55e-10,39;CL:0000211,2.55e-10,39;CL:0002319,3.79e-09,43;CL:0002611,1.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.80e-14!75;UBERON:0001016!9.80e-14!75;UBERON:0001017!1.85e-13!73;UBERON:0005743!1.85e-13!73;UBERON:0000153!1.64e-12!94;UBERON:0004121!2.27e-12!102;UBERON:0000924!2.27e-12!102;UBERON:0006601!2.27e-12!102;UBERON:0002346!4.12e-12!71;UBERON:0003075!4.12e-12!71;UBERON:0007284!4.12e-12!71;UBERON:0001049!7.50e-11!52;UBERON:0005068!7.50e-11!52;UBERON:0006241!7.50e-11!52;UBERON:0007135!7.50e-11!52;UBERON:0000033!2.08e-10!63;UBERON:0007811!2.21e-10!86;UBERON:0003056!5.40e-10!49;UBERON:0002020!1.55e-09!34;UBERON:0002780!2.46e-09!39;UBERON:0001890!2.46e-09!39;UBERON:0006240!2.46e-09!39;UBERON:0000955!5.31e-09!50;UBERON:0006238!5.31e-09!50;UBERON:0003080!8.25e-09!40;UBERON:0002616!1.47e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.29e-17,5;UBERON:0002315,1.29e-17,5;UBERON:0002020,1.29e-16,34;UBERON:0002240,1.23e-14,6;UBERON:0005174,1.23e-14,6;UBERON:0001137,1.23e-14,6;UBERON:0001049,2.33e-13,52;UBERON:0005068,2.33e-13,52;UBERON:0006241,2.33e-13,52;UBERON:0007135,2.33e-13,52;UBERON:0001017,7.26e-13,73;UBERON:0000073,9.56e-13,54;UBERON:0001016,2.01e-12,75;UBERON:0002257,1.34e-11,3;UBERON:0002346,2.94e-10,64;UBERON:0003075,2.94e-10,64;UBERON:0007284,2.94e-10,64;UBERON:0004121,3.11e-10,95;UBERON:0000924,3.11e-10,95;UBERON:0006601,3.11e-10,95;UBERON:0010371,6.51e-10,73;UBERON:0002780,3.54e-08,39;UBERON:0001890,3.54e-08,39;UBERON:0006240,3.54e-08,39;UBERON:0003080,6.33e-08,40;UBERON:0003528,1.13e-07,29;UBERON:0002791,1.13e-07,29;UBERON:0001893,1.13e-07,29;UBERON:0002256,1.15e-07,2;UBERON:0010314,3.58e-07,92;UBERON:0003076,3.63e-07,12;UBERON:0003057,3.63e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,0.414758449233911,0.135005938331691,1.26194976810829,2.28520787523043,1.54607978666129,0.61245399607477,0.670918297127655,1.83843757322004,0,0.383062014255563,0.46081959976873,1.71452174049252,1.73826522844578,0,0,0,0.916789486660861,2.94628585473668,3.27454865837937,4.28718725398191,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0.45673551887624,0,0,0.693941307064543,0,0.461230994512117,0.452167921657868,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,1.13088916901578,0.173824320192276,1.02286182932132,0,0.162241263067758,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0.689706313300419,0.540186389416048,0.60281927134286,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.703804496655795,1.09597866213787,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.938104239924385,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.631016438832513,0,0.861693590931196,0,1.33679204449436,0.566153061577665,0,0,0,0.642642632843614,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.214337035031592,0.709360934569094,1.78368817602071,1.64549020602121,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,24.8024893021044,0.598066184175915,1.32366792365678,0.388902376688095,0.774958940866387,0.506868376472335,0.117357238645754,0.2604087696879,0.104859344425711,8.45544422891021,10.9451402377989,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.600977247599844,0.147689527174577,0,0,0.100826185136841,0.38983152295901,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,1.38097570952153,0,1.89038500578056,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.287177344778066,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.830445126869219,0.394017929502254,0.818462086339379,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p5@Kcnmb4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=58802
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q9JIN6
|association_with_transcript=-22bp_to_NM_021452,uc007hbw.1,uc007hby.1_5end
|cluster_id=chr10:115910601..115910617,-
|description=CAGE_peak_5_at_Kcnmb4_5end
|id=chr10:115910601..115910617,-
|ontology_enrichment_celltype=CL:0000117!6.52e-09!23;CL:0000337!6.52e-09!23;CL:0000540!2.67e-08!33;CL:0000047!2.67e-08!33;CL:0000031!2.67e-08!33;CL:0000404!2.67e-08!33;CL:0000221!3.31e-07!44;CL:0000133!3.31e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-16,23;CL:0000337,4.54e-16,23;CL:0000540,1.30e-12,33;CL:0000047,1.30e-12,33;CL:0000031,1.30e-12,33;CL:0000404,1.30e-12,33;CL:0002612,1.34e-11,3;CL:0000221,1.51e-10,44;CL:0000133,1.51e-10,44;CL:0000393,2.55e-10,39;CL:0000211,2.55e-10,39;CL:0002319,3.79e-09,43;CL:0002611,1.15e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.80e-14!75;UBERON:0001016!9.80e-14!75;UBERON:0001017!1.85e-13!73;UBERON:0005743!1.85e-13!73;UBERON:0000153!1.64e-12!94;UBERON:0004121!2.27e-12!102;UBERON:0000924!2.27e-12!102;UBERON:0006601!2.27e-12!102;UBERON:0002346!4.12e-12!71;UBERON:0003075!4.12e-12!71;UBERON:0007284!4.12e-12!71;UBERON:0001049!7.50e-11!52;UBERON:0005068!7.50e-11!52;UBERON:0006241!7.50e-11!52;UBERON:0007135!7.50e-11!52;UBERON:0000033!2.08e-10!63;UBERON:0007811!2.21e-10!86;UBERON:0003056!5.40e-10!49;UBERON:0002020!1.55e-09!34;UBERON:0002780!2.46e-09!39;UBERON:0001890!2.46e-09!39;UBERON:0006240!2.46e-09!39;UBERON:0000955!5.31e-09!50;UBERON:0006238!5.31e-09!50;UBERON:0003080!8.25e-09!40;UBERON:0002616!1.47e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.29e-17,5;UBERON:0002315,1.29e-17,5;UBERON:0002020,1.29e-16,34;UBERON:0002240,1.23e-14,6;UBERON:0005174,1.23e-14,6;UBERON:0001137,1.23e-14,6;UBERON:0001049,2.33e-13,52;UBERON:0005068,2.33e-13,52;UBERON:0006241,2.33e-13,52;UBERON:0007135,2.33e-13,52;UBERON:0001017,7.26e-13,73;UBERON:0000073,9.56e-13,54;UBERON:0001016,2.01e-12,75;UBERON:0002257,1.34e-11,3;UBERON:0002346,2.94e-10,64;UBERON:0003075,2.94e-10,64;UBERON:0007284,2.94e-10,64;UBERON:0004121,3.11e-10,95;UBERON:0000924,3.11e-10,95;UBERON:0006601,3.11e-10,95;UBERON:0010371,6.51e-10,73;UBERON:0002780,3.54e-08,39;UBERON:0001890,3.54e-08,39;UBERON:0006240,3.54e-08,39;UBERON:0003080,6.33e-08,40;UBERON:0003528,1.13e-07,29;UBERON:0002791,1.13e-07,29;UBERON:0001893,1.13e-07,29;UBERON:0002256,1.15e-07,2;UBERON:0010314,3.58e-07,92;UBERON:0003076,3.63e-07,12;UBERON:0003057,3.63e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,0.414758449233911,0.135005938331691,1.26194976810829,2.28520787523043,1.54607978666129,0.61245399607477,0.670918297127655,1.83843757322004,0,0.383062014255563,0.46081959976873,1.71452174049252,1.73826522844578,0,0,0,0.916789486660861,2.94628585473668,3.27454865837937,4.28718725398191,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0.45673551887624,0,0,0.693941307064543,0,0.461230994512117,0.452167921657868,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,1.13088916901578,0.173824320192276,1.02286182932132,0,0.162241263067758,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0.689706313300419,0.540186389416048,0.60281927134286,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.703804496655795,1.09597866213787,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.938104239924385,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.631016438832513,0,0.861693590931196,0,1.33679204449436,0.566153061577665,0,0,0,0.642642632843614,0,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.214337035031592,0.709360934569094,1.78368817602071,1.64549020602121,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,24.8024893021044,0.598066184175915,1.32366792365678,0.388902376688095,0.774958940866387,0.506868376472335,0.117357238645754,0.2604087696879,0.104859344425711,8.45544422891021,10.9451402377989,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.600977247599844,0.147689527174577,0,0,0.100826185136841,0.38983152295901,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,1.38097570952153,0,1.89038500578056,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.287177344778066,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.830445126869219,0.394017929502254,0.818462086339379,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0,0
|short_description=p5@Kcnmb4
}}

Latest revision as of 15:15, 25 September 2015

Short description:p5@Kcnmb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Kcnmb4_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -22bp_to_NM_021452, uc007hbw.1, uc007hby.1_5end
EntrezGene:Kcnmb4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Kcnmb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of spinal cord1.29e-175
gray matter of spinal cord1.29e-175
gray matter1.29e-1634
spinal cord1.23e-146
dorsal region element1.23e-146
dorsum1.23e-146
neural tube2.33e-1352
neural rod2.33e-1352
future spinal cord2.33e-1352
neural keel2.33e-1352
central nervous system7.26e-1373
regional part of nervous system9.56e-1354
nervous system2.01e-1275
ventral horn of spinal cord1.34e-113
neurectoderm2.94e-1064
neural plate2.94e-1064
presumptive neural plate2.94e-1064
ectoderm-derived structure3.11e-1095
ectoderm3.11e-1095
presumptive ectoderm3.11e-1095
ecto-epithelium6.51e-1073
regional part of forebrain3.54e-0839
forebrain3.54e-0839
future forebrain3.54e-0839
anterior neural tube6.33e-0840
brain grey matter1.13e-0729
regional part of telencephalon1.13e-0729
telencephalon1.13e-0729
dorsal horn of spinal cord1.15e-072
structure with developmental contribution from neural crest3.58e-0792
posterior neural tube3.63e-0712
chordal neural plate3.63e-0712
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