FFCP PHASE1:Mm9::chr19:36422960..36422990,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:36422960..36422990,+
|short_description=p6@Pcgf5
|description=CAGE_peak_6_at_Pcgf5_5end
|association_with_transcript=16bp_to_uc008hhi.1,uc012bkz.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76073 | |EntrezGene=76073 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UK78 | |UniProt=Q3UK78 | ||
|association_with_transcript=16bp_to_uc008hhi.1,uc012bkz.1_5end | |||
|cluster_id=chr19:36422960..36422990,+ | |||
|description=CAGE_peak_6_at_Pcgf5_5end | |||
|id=chr19:36422960..36422990,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.95e-08,9;CL:0000789,8.95e-08,9;CL:0002420,8.95e-08,9;CL:0002419,8.95e-08,9;CL:0000790,8.95e-08,9;CL:0000624,3.11e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.08e-08!23;UBERON:0001009!2.08e-08!23;UBERON:0003081!6.53e-08!88;UBERON:0007100!3.82e-07!18;UBERON:0000948!3.82e-07!18;UBERON:0005498!3.82e-07!18;UBERON:0004140!3.82e-07!18;UBERON:0009881!3.82e-07!18;UBERON:0004141!3.82e-07!18;UBERON:0003084!3.82e-07!18;UBERON:0007005!3.82e-07!18;UBERON:0004139!3.82e-07!18;UBERON:0004291!3.82e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.23e-10,23;UBERON:0001009,2.23e-10,23;UBERON:0003081,1.61e-09,87;UBERON:0004872,8.81e-09,33;UBERON:0007100,1.68e-08,18;UBERON:0000948,1.68e-08,18;UBERON:0005498,1.68e-08,18;UBERON:0004140,1.68e-08,18;UBERON:0009881,1.68e-08,18;UBERON:0004141,1.68e-08,18;UBERON:0003084,1.68e-08,18;UBERON:0007005,1.68e-08,18;UBERON:0004139,1.68e-08,18;UBERON:0004291,1.68e-08,18 | |||
|phase1_expression=0,1.39590163055744,3.63999391511629,2.11724947914781,1.50268718983904,1.34303417529512,0.700837921786577,1.93684985162364,12.9525624379533,22.9383235795554,3.93801326918661,2.87179772383211,1.88320802924326,2.71003247498892,0,0.809901069559304,0,0.473193248037357,0.685572168028694,0.84877930359606,0.680346321208558,0.496454756004426,0.783599367416806,0.799962113967033,0.91763712426868,3.44539178469012,0,1.07735616342945,1.33016393619462,0.504060259519861,0.443461021310609,0,0,15.8481681015439,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0.523523743973798,0.588231488031014,0.683045484958446,1.94204141212461,4.02869817521847,3.24406179902447,1.28482726513177,0.782391344348039,0.65407546914134,0.219686182734472,0.58328969722285,0.279972843250725,0,0.503347818173209,1.45072428402269,2.01656279485478,2.31533492432352,1.14613375975503,2.57836046138721,0,0.528990979272033,0,1.69422266034566,0.889294796111139,0.449949858640699,0,0,1.19840044207362,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,1.78762273319263,1.84327839907492,0.131886287730194,0.0914876436024097,0,1.95428099300967,1.68828783009504,1.5279824777681,0.294628585473668,0,0,0.454357159999104,0,0.289864488701678,0,10.879541339324,0.539703191637817,2.59910566979068,3.13618820968135,0.983110940922263,0.681721290312231,2.07828803682295,1.41335829804136,0.281686839553361,1.28326477414318,5.09610479413291,0,0.216491041011214,0.253359865475099,0,2.16949371466214,1.29468941823586,1.03909497345377,0.173485326766136,0.608930956624282,0.461230994512117,0,0.470354828542819,0.628332956648377,10.1349936771093,3.47038456607788,1.76922110389975,0.647067399789637,0.220841518460394,0.969750506270444,0,2.92780797011547,0.83778682725382,0.510914110417183,4.79260498023681,4.79922184794726,3.93917703926501,2.39665023047716,2.28750301409313,0.251308704225729,1.56441888173049,0.767146371990992,1.66230435647648,1.46017136760982,0,0.746441823660558,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0.60281927134286,1.2246569847239,0.512454881139399,0.843315521037559,0.258703370739016,0,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,0,0,2.1066395619397,2.83082697826187,2.55747149456033,0.828503090142008,0.469052119962192,0.540186184383045,1.42046841351126,2.36117078096885,1.54267112887378,2.09280550275367,2.41446061259657,2.80236821681207,1.81015834904829,2.29834449710733,4.05344047729279,5.26319954731196,5.04965265169416,6.30770168173747,0.841159794256509,0.205809224758569,0.660837565967596,0.793351699990633,0.213288250535234,0.232236671860439,0,0.605050573870028,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.252946148497029,0.738050739898011,0.941992367048249,0.740382983530803,3.55743152504579,0.166845105716094,0.196558995113203,0.449724224769707,0,0.241177159752417,0.50925170356284,1.43848068725405,0.810676133875177,0.274561413188081,0,0,0,0.757736633841335,1.25578189465339,3.37710464954357,2.40179147216586,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,0.585400943573396,0.472905432318573,0.44292937929755,0.318909537314974,0.983179888294428,0.518054945597687,1.15719246865209,0,0.54390568381871,0.491764273019036,0.551873492609465,0.963303539926752,2.10981035865966,1.96721934452011,6.31177318010932,0.94652465824877,0,2.36965737506079,0.477937595905104,0.668396022247182,1.13230612315533,0.809621403349789,0.584511715822624,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.494910368917606,1.32745138339963,0.242780636154981,0.302323556964751,0,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,1.70219802876894,0,0,0,0.532020700926821,0.178368817602071,0.987294123612726,0,2.58138878870081,7.83778662196135,0,1.48397627647332,0.322928853391811,0,0,0.164140899745061,0.291480836629851,1.48340241608408,1.02522528478712,0,1.11116716421827,0.376736914009382,0.410082683163076,0,5.94924504978494,5.73800954526998,5.38979897837253,0.954670618015114,0.158167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.648074866458964,0,0,0,0,0.194451188344048,0.516639293910924,0.844780627453891,0.352071715937262,0.5208175393758,0.734015410979976,0.483168241652012,0.288030006257865,1.26404448251271,0,1.02710957164827,0.909445760844565,0.179026695667481,1.19208812868759,0.961563596159751,1.62458479892035,1.00966449948148,1.5241361331,0.907435666231565,2.0466154955348,1.25075394132428,0.701261413089414,1.81384306892169,3.7737612073591,0.538283139656854,4.36500002546604,3.86379188064381,0.375364950902364,0.36630324853453,0,1.50471631210609,1.12950368523413,1.38097570952153,0,1.71853182343688,2.05524755931193,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,2.5888015587591,0.207574695168353,0.399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| 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| ||
|short_description=p6@Pcgf5 | |||
}} | }} |
Latest revision as of 16:23, 25 September 2015
Short description: | p6@Pcgf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pcgf5_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_uc008hhi.1, uc012bkz.1_5end |
EntrezGene: | Pcgf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.95e-08 | 9 |
alpha-beta T cell | 8.95e-08 | 9 |
immature T cell | 8.95e-08 | 9 |
mature T cell | 8.95e-08 | 9 |
immature alpha-beta T cell | 8.95e-08 | 9 |
CD4-positive, alpha-beta T cell | 3.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.23e-10 | 23 |
circulatory system | 2.23e-10 | 23 |
lateral plate mesoderm | 1.61e-09 | 87 |
splanchnic layer of lateral plate mesoderm | 8.81e-09 | 33 |
primary circulatory organ | 1.68e-08 | 18 |
heart | 1.68e-08 | 18 |
primitive heart tube | 1.68e-08 | 18 |
primary heart field | 1.68e-08 | 18 |
anterior lateral plate mesoderm | 1.68e-08 | 18 |
heart tube | 1.68e-08 | 18 |
heart primordium | 1.68e-08 | 18 |
cardiac mesoderm | 1.68e-08 | 18 |
cardiogenic plate | 1.68e-08 | 18 |
heart rudiment | 1.68e-08 | 18 |