FFCP PHASE1:Mm9::chr7:112574448..112574516,+: Difference between revisions
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{{FFCP|EntrezGene=12426|HGNC=|MCL_coexpression_id=2|UniProt=P56481,Q3ZB46|association_with_transcript=114bp_to_ENSMUST00000033189,NM_007627,uc009iyd.1,uc012fro.1_5end|description=CAGE_peak_1_at_Cckbr_5end|id=chr7:112574448..112574516,+|ontology_enrichment_celltype=CL:0000117!5.96e-07!23;CL:0000337!5.96e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-11,23;CL:0000337,1.62e-11,23;CL:0000540,5.89e-07,33;CL:0000047,5.89e-07,33;CL:0000031,5.89e-07,33;CL:0000404,5.89e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.50e-20!75;UBERON:0001016!3.50e-20!75;UBERON:0001017!5.42e-20!73;UBERON:0005743!5.42e-20!73;UBERON:0004121!9.07e-18!102;UBERON:0000924!9.07e-18!102;UBERON:0006601!9.07e-18!102;UBERON:0002346!3.79e-16!71;UBERON:0003075!3.79e-16!71;UBERON:0007284!3.79e-16!71;UBERON:0001049!2.29e-15!52;UBERON:0005068!2.29e-15!52;UBERON:0006241!2.29e-15!52;UBERON:0007135!2.29e-15!52;UBERON:0000033!1.60e-14!63;UBERON:0003056!2.36e-14!49;UBERON:0000955!8.91e-14!50;UBERON:0006238!8.91e-14!50;UBERON:0002616!4.51e-13!49;UBERON:0002020!8.07e-13!34;UBERON:0003080!4.40e-12!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0002021!7.82e-10!10;UBERON:0000411!7.82e-10!10;UBERON:0001950!7.82e-10!10;UBERON:0002791!1.59e-09!29;UBERON:0003528!1.59e-09!29;UBERON:0001893!1.59e-09!29;UBERON:0007811!6.70e-08!86;UBERON:0002619!8.65e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-26,54;UBERON:0001017,8.90e-26,73;UBERON:0001016,8.30e-25,75;UBERON:0002346,1.05e-24,64;UBERON:0003075,1.05e-24,64;UBERON:0007284,1.05e-24,64;UBERON:0001049,1.58e-24,52;UBERON:0005068,1.58e-24,52;UBERON:0006241,1.58e-24,52;UBERON:0007135,1.58e-24,52;UBERON:0002020,1.91e-24,34;UBERON:0004121,9.91e-23,95;UBERON:0000924,9.91e-23,95;UBERON:0006601,9.91e-23,95;UBERON:0010371,1.90e-20,73;UBERON:0003056,2.45e-19,49;UBERON:0000955,1.50e-18,47;UBERON:0006238,1.50e-18,47;UBERON:0002021,1.76e-18,10;UBERON:0000411,1.76e-18,10;UBERON:0001950,1.76e-18,10;UBERON:0003528,1.05e-17,29;UBERON:0002791,1.05e-17,29;UBERON:0001893,1.05e-17,29;UBERON:0003080,1.29e-17,40;UBERON:0002616,2.79e-17,46;UBERON:0002780,2.27e-16,39;UBERON:0001890,2.27e-16,39;UBERON:0006240,2.27e-16,39;UBERON:0010314,3.10e-14,92;UBERON:0002619,9.19e-14,17;UBERON:0000956,1.62e-12,21;UBERON:0001869,1.62e-12,21;UBERON:0000203,1.62e-12,21;UBERON:0002240,5.39e-10,6;UBERON:0005174,5.39e-10,6;UBERON:0001137,5.39e-10,6;UBERON:0001948,9.68e-09,5;UBERON:0002315,9.68e-09,5;UBERON:0003076,1.56e-07,12;UBERON:0003057,1.56e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,7.9982275633065,6.40518768759679,0.122490799214954,0,0,1.10115880999389,1.40456071893706,2.76491759861238,0.923204014111357,1.37231465403614,0.52091337055676,2.51264699101243,2.8138130501584,1.98637722109853,6.18720029494702,5.41012387036591,2.23679334990361,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,6.44099749440738,4.57500602818627,2.89005009859588,36.8507558807626,37.8458876848889,2.70124457927428,5.84068547043927,0,0,0.252722758433675,0.631325567659422,0.260240885925407,0,0,0.90422890701429,3.60593445502038,3.58718416797579,2.99845518591132,4.65666067330228,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,1.85228302282712,0,0.264450566663544,0,0.464473343720877,0,0,0.444756087689741,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.114248512609729,0,0.610953983535943,0,0.350679099451593,0.758838445491087,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.40825884981688,1.28932855251423,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0.395287777946524,42.4144137676785,0.851640511249612,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0.377210159511796,0,0.307435147943927,2.06742634534577,2.54473610634254,1.78248689192361,5.37262488490887,1.05418608574999,4.12542172992747,2.04263763452273,0.18006109403131,0.517434735131018,0,0.532020700926821,0,0.493647061806363,0.913394847343798,0.23467170806371,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,3.81868247206045,0.632671987162271,0,0.648032044930808,0.418176592028937,0.87345025498471,1.34864346384821,1.98368293740806,2.35580347785627,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,34.4498623996411,46.4928488872249,40.6755814541972,55.8522842616985,47.955776383945,44.5682399459923,53.3267775183127,45.032120322422,46.6736681253731,54.8825930456929,0,1.19707462020309,0.170733605754134,0,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,0.320125762024346,0.689225627467359,0.952587382566147,0.695305955669133,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0,0.726732083161643,0.188218760830661,0.592302255241736,0.182927972872773,0.526139422875686,0.679020569229309,0,0.355905054372522,0.689531376628944,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p1@Cckbr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12426 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=P56481,Q3ZB46 | |||
|association_with_transcript=114bp_to_ENSMUST00000033189,NM_007627,uc009iyd.1,uc012fro.1_5end | |||
|cluster_id=chr7:112574448..112574516,+ | |||
|description=CAGE_peak_1_at_Cckbr_5end | |||
|id=chr7:112574448..112574516,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.96e-07!23;CL:0000337!5.96e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-11,23;CL:0000337,1.62e-11,23;CL:0000540,5.89e-07,33;CL:0000047,5.89e-07,33;CL:0000031,5.89e-07,33;CL:0000404,5.89e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.50e-20!75;UBERON:0001016!3.50e-20!75;UBERON:0001017!5.42e-20!73;UBERON:0005743!5.42e-20!73;UBERON:0004121!9.07e-18!102;UBERON:0000924!9.07e-18!102;UBERON:0006601!9.07e-18!102;UBERON:0002346!3.79e-16!71;UBERON:0003075!3.79e-16!71;UBERON:0007284!3.79e-16!71;UBERON:0001049!2.29e-15!52;UBERON:0005068!2.29e-15!52;UBERON:0006241!2.29e-15!52;UBERON:0007135!2.29e-15!52;UBERON:0000033!1.60e-14!63;UBERON:0003056!2.36e-14!49;UBERON:0000955!8.91e-14!50;UBERON:0006238!8.91e-14!50;UBERON:0002616!4.51e-13!49;UBERON:0002020!8.07e-13!34;UBERON:0003080!4.40e-12!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0002021!7.82e-10!10;UBERON:0000411!7.82e-10!10;UBERON:0001950!7.82e-10!10;UBERON:0002791!1.59e-09!29;UBERON:0003528!1.59e-09!29;UBERON:0001893!1.59e-09!29;UBERON:0007811!6.70e-08!86;UBERON:0002619!8.65e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-26,54;UBERON:0001017,8.90e-26,73;UBERON:0001016,8.30e-25,75;UBERON:0002346,1.05e-24,64;UBERON:0003075,1.05e-24,64;UBERON:0007284,1.05e-24,64;UBERON:0001049,1.58e-24,52;UBERON:0005068,1.58e-24,52;UBERON:0006241,1.58e-24,52;UBERON:0007135,1.58e-24,52;UBERON:0002020,1.91e-24,34;UBERON:0004121,9.91e-23,95;UBERON:0000924,9.91e-23,95;UBERON:0006601,9.91e-23,95;UBERON:0010371,1.90e-20,73;UBERON:0003056,2.45e-19,49;UBERON:0000955,1.50e-18,47;UBERON:0006238,1.50e-18,47;UBERON:0002021,1.76e-18,10;UBERON:0000411,1.76e-18,10;UBERON:0001950,1.76e-18,10;UBERON:0003528,1.05e-17,29;UBERON:0002791,1.05e-17,29;UBERON:0001893,1.05e-17,29;UBERON:0003080,1.29e-17,40;UBERON:0002616,2.79e-17,46;UBERON:0002780,2.27e-16,39;UBERON:0001890,2.27e-16,39;UBERON:0006240,2.27e-16,39;UBERON:0010314,3.10e-14,92;UBERON:0002619,9.19e-14,17;UBERON:0000956,1.62e-12,21;UBERON:0001869,1.62e-12,21;UBERON:0000203,1.62e-12,21;UBERON:0002240,5.39e-10,6;UBERON:0005174,5.39e-10,6;UBERON:0001137,5.39e-10,6;UBERON:0001948,9.68e-09,5;UBERON:0002315,9.68e-09,5;UBERON:0003076,1.56e-07,12;UBERON:0003057,1.56e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,7.9982275633065,6.40518768759679,0.122490799214954,0,0,1.10115880999389,1.40456071893706,2.76491759861238,0.923204014111357,1.37231465403614,0.52091337055676,2.51264699101243,2.8138130501584,1.98637722109853,6.18720029494702,5.41012387036591,2.23679334990361,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,6.44099749440738,4.57500602818627,2.89005009859588,36.8507558807626,37.8458876848889,2.70124457927428,5.84068547043927,0,0,0.252722758433675,0.631325567659422,0.260240885925407,0,0,0.90422890701429,3.60593445502038,3.58718416797579,2.99845518591132,4.65666067330228,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,1.85228302282712,0,0.264450566663544,0,0.464473343720877,0,0,0.444756087689741,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.114248512609729,0,0.610953983535943,0,0.350679099451593,0.758838445491087,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.40825884981688,1.28932855251423,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0,0,0.395287777946524,42.4144137676785,0.851640511249612,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0.377210159511796,0,0.307435147943927,2.06742634534577,2.54473610634254,1.78248689192361,5.37262488490887,1.05418608574999,4.12542172992747,2.04263763452273,0.18006109403131,0.517434735131018,0,0.532020700926821,0,0.493647061806363,0.913394847343798,0.23467170806371,0,0,0,0,0,0.119372344003136,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,3.81868247206045,0.632671987162271,0,0.648032044930808,0.418176592028937,0.87345025498471,1.34864346384821,1.98368293740806,2.35580347785627,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,34.4498623996411,46.4928488872249,40.6755814541972,55.8522842616985,47.955776383945,44.5682399459923,53.3267775183127,45.032120322422,46.6736681253731,54.8825930456929,0,1.19707462020309,0.170733605754134,0,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,0.320125762024346,0.689225627467359,0.952587382566147,0.695305955669133,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.177475806159338,0,0.726732083161643,0.188218760830661,0.592302255241736,0.182927972872773,0.526139422875686,0.679020569229309,0,0.355905054372522,0.689531376628944,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Cckbr | |||
}} |
Latest revision as of 16:25, 25 September 2015
Short description: | p1@Cckbr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cckbr_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 114bp_to_ENSMUST00000033189, NM_007627, uc009iyd.1, uc012fro.1_5end |
EntrezGene: | Cckbr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-11 | 23 |
neuron | 5.89e-07 | 33 |
neuronal stem cell | 5.89e-07 | 33 |
neuroblast | 5.89e-07 | 33 |
electrically signaling cell | 5.89e-07 | 33 |