FFCP PHASE1:Mm9::chr19:3972437..3972468,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=621603 | |EntrezGene=621603 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3E1 | |UniProt=E9Q3E1 | ||
|association_with_transcript=109bp_to_ENSMUST00000143380,NM_001177438,uc008fxw.2_5end | |association_with_transcript=109bp_to_ENSMUST00000143380,NM_001177438,uc008fxw.2_5end | ||
|cluster_id=chr19:3972437..3972468,+ | |||
|description=CAGE_peak_3_at_Aldh3b2_5end | |description=CAGE_peak_3_at_Aldh3b2_5end | ||
|id=chr19:3972437..3972468,+ | |id=chr19:3972437..3972468,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.51e-08!23 | |ontology_enrichment_uberon=UBERON:0003102!3.51e-08!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.06e-12,22;UBERON:0000014,2.18e-10,5;UBERON:0001003,2.18e-10,5;UBERON:0002097,2.18e-10,5;UBERON:0002199,2.18e-10,5;UBERON:0007029,2.18e-10,5;UBERON:0007376,2.18e-10,5;UBERON:0002416,2.18e-10,5;UBERON:0007383,2.18e-10,5;UBERON:0000161,2.49e-10,5;UBERON:0007023,2.17e-08,51;UBERON:0004175,9.87e-08,9;UBERON:0005631,7.26e-07,3;UBERON:0000478,7.26e-07,3;UBERON:0000158,7.26e-07,3;UBERON:0000162,9.06e-07,3;UBERON:0001353,9.06e-07,3;UBERON:0000163,9.06e-07,3;UBERON:0006866,9.06e-07,3;UBERON:0001046,9.06e-07,3;UBERON:0000164,9.06e-07,3;UBERON:0000931,9.06e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91555470461132,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.48439043634778,0.258937883647172,0.742210695324124,0,0,0,0,0,1.13099932196708,2.47194967734374,3.18118585223806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,8.84529654517861,156.35829892365,0.130120442962704,0.229902104433473,0.360124259610698,1.20563854268572,0.136072998302656,0.12811372028485,0.0937017245597288,48.1188269574569,0.215567992932842,0,0.703804496655795,1.31517439456545,1.11218899690239,0.696504333044333,1.64625709126355,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0.775809948670503,0.420814919341911,0.316182685621286,0.442830443938806,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,2.45882136509518,6.89841865761831,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,13.3762873596315,15.8874053147865,2.64634077665954,9.23363016472288,2.74489525383039,4.58378229453985,10.2660215842697,15.4292445760358,0,0,0,0,0,0,0,0.228778173206523,0,0,0,6.68269432610579,0,0.813277868507395,1.83609079397062,3.55450103224597,3.9305261474312,4.18079473792944,2.81021749466142,2.87931536182433,1.16653475962614,44.7364305422586,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,1.26404448251271,1.41907650703115,0.924398614483445,0.649604114888975,0.179026695667481,0.596044064343795,0.360586348559907,0.590758108698309,0.908698049533329,0.381034033274999,0.806609481094724,0.292373642219257,0.384847366561318,0.584384510907845,2.94749498699775,2.88581739386284,0.179427713218951,5.70807695637867,41.5357627169209,1.31377732815827,0.183151624267265,5.78794623513478,11.034586288778,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.02440163452481,0.972426868273176,0.209613162627982,0,0.44449345560323,0.412070114477788,0.64183841918363,0,0,0.188626341386076,0.561849044819294,0.512201219238954,0.689225627467359,0.476293691283074,0.695305955669133,0.77163688185482,0,0.735994600671987,0.342869252385415,0.532427418478012,1.66905332963125,0.145346416632329,0.658765662907314,0.846146078916765,0.548783918618318,0.789209134313529,0.407412341537585,1.12228454331548,0.355905054372522,1.47756723563345,0.818462086339379,0.619747364743864,1.73615949883027,1.49886346762768,1.40358965067245,1.07435527024149,0.191288332068843,2.64709702943419,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91555470461132,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.48439043634778,0.258937883647172,0.742210695324124,0,0,0,0,0,1.13099932196708,2.47194967734374,3.18118585223806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,8.84529654517861,156.35829892365,0.130120442962704,0.229902104433473,0.360124259610698,1.20563854268572,0.136072998302656,0.12811372028485,0.0937017245597288,48.1188269574569,0.215567992932842,0,0.703804496655795,1.31517439456545,1.11218899690239,0.696504333044333,1.64625709126355,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0.775809948670503,0.420814919341911,0.316182685621286,0.442830443938806,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,2.45882136509518,6.89841865761831,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,13.3762873596315,15.8874053147865,2.64634077665954,9.23363016472288,2.74489525383039,4.58378229453985,10.2660215842697,15.4292445760358,0,0,0,0,0,0,0,0.228778173206523,0,0,0,6.68269432610579,0,0.813277868507395,1.83609079397062,3.55450103224597,3.9305261474312,4.18079473792944,2.81021749466142,2.87931536182433,1.16653475962614,44.7364305422586,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,1.26404448251271,1.41907650703115,0.924398614483445,0.649604114888975,0.179026695667481,0.596044064343795,0.360586348559907,0.590758108698309,0.908698049533329,0.381034033274999,0.806609481094724,0.292373642219257,0.384847366561318,0.584384510907845,2.94749498699775,2.88581739386284,0.179427713218951,5.70807695637867,41.5357627169209,1.31377732815827,0.183151624267265,5.78794623513478,11.034586288778,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.02440163452481,0.972426868273176,0.209613162627982,0,0.44449345560323,0.412070114477788,0.64183841918363,0,0,0.188626341386076,0.561849044819294,0.512201219238954,0.689225627467359,0.476293691283074,0.695305955669133,0.77163688185482,0,0.735994600671987,0.342869252385415,0.532427418478012,1.66905332963125,0.145346416632329,0.658765662907314,0.846146078916765,0.548783918618318,0.789209134313529,0.407412341537585,1.12228454331548,0.355905054372522,1.47756723563345,0.818462086339379,0.619747364743864,1.73615949883027,1.49886346762768,1.40358965067245,1.07435527024149,0.191288332068843,2.64709702943419,0.927471342481686 | ||
|short_description=p3@Aldh3b2 | |short_description=p3@Aldh3b2 | ||
}} | }} |
Latest revision as of 17:32, 25 September 2015
Short description: | p3@Aldh3b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Aldh3b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 109bp_to_ENSMUST00000143380, NM_001177438, uc008fxw.2_5end |
EntrezGene: | Aldh3b2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 3.06e-12 | 22 |
zone of skin | 2.18e-10 | 5 |
skin epidermis | 2.18e-10 | 5 |
skin of body | 2.18e-10 | 5 |
integument | 2.18e-10 | 5 |
surface | 2.18e-10 | 5 |
outer epithelium | 2.18e-10 | 5 |
integumental system | 2.18e-10 | 5 |
enveloping layer of ectoderm | 2.18e-10 | 5 |
orifice | 2.49e-10 | 5 |
adult organism | 2.17e-08 | 51 |
internal genitalia | 9.87e-08 | 9 |
extraembryonic membrane | 7.26e-07 | 3 |
extraembryonic structure | 7.26e-07 | 3 |
membranous layer | 7.26e-07 | 3 |
cloaca | 9.06e-07 | 3 |
anal region | 9.06e-07 | 3 |
embryonic cloaca | 9.06e-07 | 3 |
terminal part of digestive tract | 9.06e-07 | 3 |
hindgut | 9.06e-07 | 3 |
primitive urogenital sinus | 9.06e-07 | 3 |
proctodeum | 9.06e-07 | 3 |