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FFCP PHASE1:Mm9::chr3:80840560..80840660,+: Difference between revisions

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{{FFCP|EntrezGene=54635|HGNC=|MCL_coexpression_id=2381|UniProt=Q8CI19|association_with_transcript=222bp_to_ENSMUST00000029652,NM_019971,uc008poi.1,uc008poj.1,uc008pok.1_5end|description=CAGE_peak_1_at_Pdgfc_5end|id=chr3:80840560..80840660,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.58e-10!333;UBERON:0000922!3.40e-07!328|ontology_enrichment_uberon_v019_2=|phase1_expression=20.3389035823088,7.32848356042658,6.82498859084304,14.5182821427278,16.0286633582831,0,0.467225281191051,0,0,0,0,0,0,0,2.6648780945253,1.41732687172878,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,7.39876624314307,0,0,0.95995453676044,0,2.29692785646008,2.15380998079537,2.80112602491656,10.0712412311878,5.04060259519861,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,6.54663453473002,8.51566222243922,3.48738829107195,14.8654355426127,9.3750817243592,15.1583466086786,19.0541301092798,14.4186014274123,30.188038516644,0,0,0,3.60163210450326,1.43266719969378,15.9858348606007,7.48570905180512,4.23192783417626,6.97214543856797,6.09920157724438,4.4464739805557,8.99899717281399,12.8552627133707,11.3676818391376,9.58720353658895,9.22123932771731,4.35496371695606,3.64516033495565,4.20649922702764,6.28432165688368,9.27647871996777,4.16468717330844,3.64212789869298,2.75765635983006,3.30347642998166,3.70293280447044,3.5329502648936,1.71452174049252,2.10421580285542,0.52091337055676,2.79182999001381,3.93933827022176,5.34793867218835,7.36571463684169,5.12538050876771,3.91438836233131,1.36307147999731,2.56943304363071,16.5222758559956,3.44169550792555,0,3.77792234146472,5.84798775702902,3.58421509677868,5.61777680527007,5.96506129023202,4.1565760736459,5.65343319216544,46.0557982669745,10.2661181931454,17.8363667794652,14.2213340630666,8.22665955842614,7.09407623330276,4.04419556011827,6.05174562511018,8.02707439306232,11.2816025689267,8.15381035800839,9.43842982767638,10.1470818792666,6.78251882486802,16.6975964132701,10.6816602630224,13.1013332899218,23.4250958210257,5.30766331169925,19.8973225435313,9.71702681225732,16.9706338597328,14.9113408974498,2.92780797011547,4.39838084308256,8.68553987709211,0.239630249011841,0.599902730993408,0.127070227073065,5.69204429738326,4.57500602818627,3.14135880282161,5.21472960576829,6.90431734791892,4.36354893575076,4.86723789203273,50.3086457420562,18.785452562124,6.57079171927554,5.05060454127538,25.6337272636526,18.6220704591113,26.4691330813863,16.1254155084215,20.0707672496417,18.8327168818729,15.554486276915,8.2785078636485,63.3769899222556,65.0524915777298,53.1372394975126,32.0025769344259,30.3071501655902,17.0643561595862,15.2278780941878,22.6899064173082,0,0,0,10.5634143993106,13.6025114789036,7.92273070428465,10.4167683657493,7.67380503814875,5.86215028972037,5.8133486187602,6.70683503499048,6.53885917256149,5.10135534731789,1.64167464079095,3.81023404865522,4.09359964790931,5.92785311285837,5.2340503316545,3.99550902271842,3.70456604565424,12.2254949704005,4.23120906661671,31.5666610792146,22.0624838267417,13.2733485161756,13.1094291005173,7.33847544688072,9.70150693174052,9.96511029243474,12.1877226495768,12.8180956488137,16.9113001234978,11.8928093142663,8.98819408654222,6.70027954611552,7.96565093017469,27.5018456381968,15.994791765362,23.6686244913469,21.5870407516033,20.1710586654331,25.1787593406244,16.8841554121767,14.0229640580622,12.0889020437859,12.7099078839455,5.33614728756868,4.83850806576673,2.35870794135844,0.449724224769707,0.811440485554012,0.241177159752417,0.763877555344259,3.45235364940973,2.7562988551756,0.823684239564244,10.0637744569148,3.34926852901653,4.05648975048929,4.79899868099512,6.81710171383266,4.3419916922703,3.51031061316549,18.759649765278,14.6668478797823,15.7862929770925,10.0916806764056,8.04030035720716,9.52174563544055,4.87834119644497,5.2019597555043,2.87904096543407,2.07291199254733,2.45794972073607,1.89953480052485,2.16973587872267,4.52373851817817,3.26343410291226,16.7199852826472,29.2492951083016,5.77982123956051,7.14991288212439,23.2787622434879,8.58401152494868,11.6738041184015,9.76096860741596,8.83235930704476,18.8785350382516,15.1503098376028,16.1353622549635,12.1443210502468,14.6127928955656,12.2539211163422,8.9969968598106,27.6783166156124,29.0246933977626,51.9609400337908,37.6131880377381,1.32745138339963,8.25454162926937,6.95344181018927,4.33791683438566,6.496641643377,11.0676653259814,13.9551278310839,9.08834323693764,11.7644134866958,10.1131762539461,5.27093042874994,6.18813259489121,1.70219802876894,19.4465981553815,20.1799546701097,18.8616590827801,20.2167866352192,14.0911365905636,13.8221177305782,11.2652031172402,8.44818149029357,7.62595455109753,9.2621927183084,23.4138479176902,11.4639742954093,8.08193194037288,2.86493625607528,5.41664969158702,15.4484843413821,5.19190845629427,1.87957968877638,7.22354037871279,4.44466865687308,2.63715839806567,0.820165366326151,1.37266903923914,2.20971958992012,1.39951452323658,1.24379976423981,11.4560474161814,29.261079406255,11.5892096262304,13.3926622619034,15.2634456090562,13.9752040797554,12.9469772529428,11.1582165229204,8.37619014348895,7.90651337079936,18.6401793926078,2.25477175473676,13.3069725979141,10.9202603701684,8.75030347548214,10.3327858782185,8.95467465101124,15.1390837853023,17.9682051084651,9.96163772044253,7.00593950395418,4.60848010012585,3.16011120628178,6.28448167399509,4.31386020092274,2.07873316764472,1.9692936523423,2.38417625737518,0.721172697119813,0.590758108698309,1.00966449948148,0.685861259894999,0.907435666231565,1.55932609183604,0.288635524920988,1.5193997283604,9.29594572822367,1.55390167361845,0.179427713218951,1.34307693091263,16.6143050867684,24.2110393332025,34.4325053622458,21.8655746660647,7.52358156053045,4.51801474093653,3.22227665555024,5.15605962095457,3.26521046453006,2.74033007908257,4.5323633843382,4.05013500139084,4.05289082901798,3.17199686288943,3.10656187051092,24.3900266822815,45.4888355677175,19.4636310559713,19.4485373654635,13.8344687334468,9.19217542250071,10.6678429344775,14.0103838922448,19.5760717851007,15.4145299175916,14.1948407938534,14.5242282867279,12.5479620009642,14.7257850531199,13.6122061424803,14.7651044297753,9.73428337936786,12.3461901096771,11.9504911232959,13.3951017322302,13.7147700954166,15.4403951358624,10.7296285476294,15.4067201630268,11.951891312747,12.0998889285097,13.1708140468396,13.1534855718921,11.1359373353607,13.4674145197857,12.5753119211625,12.6085737440721,12.2769312950907,11.3103894065755,13.5034627686799,20.9840885467875,10.7608539884888,19.3383948643468,25.0587715010185,15.6619907574856,15.0714093153274|short_description=p1@Pdgfc}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54635
|HGNC=
|MCL_coexpression_id=2381
|TSSclassifier=NA
|UniProt=Q8CI19
|association_with_transcript=222bp_to_ENSMUST00000029652,NM_019971,uc008poi.1,uc008poj.1,uc008pok.1_5end
|cluster_id=chr3:80840560..80840660,+
|description=CAGE_peak_1_at_Pdgfc_5end
|id=chr3:80840560..80840660,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!1.58e-10!333;UBERON:0000922!3.40e-07!328
|ontology_enrichment_uberon_v019_2=
|phase1_expression=20.3389035823088,7.32848356042658,6.82498859084304,14.5182821427278,16.0286633582831,0,0.467225281191051,0,0,0,0,0,0,0,2.6648780945253,1.41732687172878,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,7.39876624314307,0,0,0.95995453676044,0,2.29692785646008,2.15380998079537,2.80112602491656,10.0712412311878,5.04060259519861,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,6.54663453473002,8.51566222243922,3.48738829107195,14.8654355426127,9.3750817243592,15.1583466086786,19.0541301092798,14.4186014274123,30.188038516644,0,0,0,3.60163210450326,1.43266719969378,15.9858348606007,7.48570905180512,4.23192783417626,6.97214543856797,6.09920157724438,4.4464739805557,8.99899717281399,12.8552627133707,11.3676818391376,9.58720353658895,9.22123932771731,4.35496371695606,3.64516033495565,4.20649922702764,6.28432165688368,9.27647871996777,4.16468717330844,3.64212789869298,2.75765635983006,3.30347642998166,3.70293280447044,3.5329502648936,1.71452174049252,2.10421580285542,0.52091337055676,2.79182999001381,3.93933827022176,5.34793867218835,7.36571463684169,5.12538050876771,3.91438836233131,1.36307147999731,2.56943304363071,16.5222758559956,3.44169550792555,0,3.77792234146472,5.84798775702902,3.58421509677868,5.61777680527007,5.96506129023202,4.1565760736459,5.65343319216544,46.0557982669745,10.2661181931454,17.8363667794652,14.2213340630666,8.22665955842614,7.09407623330276,4.04419556011827,6.05174562511018,8.02707439306232,11.2816025689267,8.15381035800839,9.43842982767638,10.1470818792666,6.78251882486802,16.6975964132701,10.6816602630224,13.1013332899218,23.4250958210257,5.30766331169925,19.8973225435313,9.71702681225732,16.9706338597328,14.9113408974498,2.92780797011547,4.39838084308256,8.68553987709211,0.239630249011841,0.599902730993408,0.127070227073065,5.69204429738326,4.57500602818627,3.14135880282161,5.21472960576829,6.90431734791892,4.36354893575076,4.86723789203273,50.3086457420562,18.785452562124,6.57079171927554,5.05060454127538,25.6337272636526,18.6220704591113,26.4691330813863,16.1254155084215,20.0707672496417,18.8327168818729,15.554486276915,8.2785078636485,63.3769899222556,65.0524915777298,53.1372394975126,32.0025769344259,30.3071501655902,17.0643561595862,15.2278780941878,22.6899064173082,0,0,0,10.5634143993106,13.6025114789036,7.92273070428465,10.4167683657493,7.67380503814875,5.86215028972037,5.8133486187602,6.70683503499048,6.53885917256149,5.10135534731789,1.64167464079095,3.81023404865522,4.09359964790931,5.92785311285837,5.2340503316545,3.99550902271842,3.70456604565424,12.2254949704005,4.23120906661671,31.5666610792146,22.0624838267417,13.2733485161756,13.1094291005173,7.33847544688072,9.70150693174052,9.96511029243474,12.1877226495768,12.8180956488137,16.9113001234978,11.8928093142663,8.98819408654222,6.70027954611552,7.96565093017469,27.5018456381968,15.994791765362,23.6686244913469,21.5870407516033,20.1710586654331,25.1787593406244,16.8841554121767,14.0229640580622,12.0889020437859,12.7099078839455,5.33614728756868,4.83850806576673,2.35870794135844,0.449724224769707,0.811440485554012,0.241177159752417,0.763877555344259,3.45235364940973,2.7562988551756,0.823684239564244,10.0637744569148,3.34926852901653,4.05648975048929,4.79899868099512,6.81710171383266,4.3419916922703,3.51031061316549,18.759649765278,14.6668478797823,15.7862929770925,10.0916806764056,8.04030035720716,9.52174563544055,4.87834119644497,5.2019597555043,2.87904096543407,2.07291199254733,2.45794972073607,1.89953480052485,2.16973587872267,4.52373851817817,3.26343410291226,16.7199852826472,29.2492951083016,5.77982123956051,7.14991288212439,23.2787622434879,8.58401152494868,11.6738041184015,9.76096860741596,8.83235930704476,18.8785350382516,15.1503098376028,16.1353622549635,12.1443210502468,14.6127928955656,12.2539211163422,8.9969968598106,27.6783166156124,29.0246933977626,51.9609400337908,37.6131880377381,1.32745138339963,8.25454162926937,6.95344181018927,4.33791683438566,6.496641643377,11.0676653259814,13.9551278310839,9.08834323693764,11.7644134866958,10.1131762539461,5.27093042874994,6.18813259489121,1.70219802876894,19.4465981553815,20.1799546701097,18.8616590827801,20.2167866352192,14.0911365905636,13.8221177305782,11.2652031172402,8.44818149029357,7.62595455109753,9.2621927183084,23.4138479176902,11.4639742954093,8.08193194037288,2.86493625607528,5.41664969158702,15.4484843413821,5.19190845629427,1.87957968877638,7.22354037871279,4.44466865687308,2.63715839806567,0.820165366326151,1.37266903923914,2.20971958992012,1.39951452323658,1.24379976423981,11.4560474161814,29.261079406255,11.5892096262304,13.3926622619034,15.2634456090562,13.9752040797554,12.9469772529428,11.1582165229204,8.37619014348895,7.90651337079936,18.6401793926078,2.25477175473676,13.3069725979141,10.9202603701684,8.75030347548214,10.3327858782185,8.95467465101124,15.1390837853023,17.9682051084651,9.96163772044253,7.00593950395418,4.60848010012585,3.16011120628178,6.28448167399509,4.31386020092274,2.07873316764472,1.9692936523423,2.38417625737518,0.721172697119813,0.590758108698309,1.00966449948148,0.685861259894999,0.907435666231565,1.55932609183604,0.288635524920988,1.5193997283604,9.29594572822367,1.55390167361845,0.179427713218951,1.34307693091263,16.6143050867684,24.2110393332025,34.4325053622458,21.8655746660647,7.52358156053045,4.51801474093653,3.22227665555024,5.15605962095457,3.26521046453006,2.74033007908257,4.5323633843382,4.05013500139084,4.05289082901798,3.17199686288943,3.10656187051092,24.3900266822815,45.4888355677175,19.4636310559713,19.4485373654635,13.8344687334468,9.19217542250071,10.6678429344775,14.0103838922448,19.5760717851007,15.4145299175916,14.1948407938534,14.5242282867279,12.5479620009642,14.7257850531199,13.6122061424803,14.7651044297753,9.73428337936786,12.3461901096771,11.9504911232959,13.3951017322302,13.7147700954166,15.4403951358624,10.7296285476294,15.4067201630268,11.951891312747,12.0998889285097,13.1708140468396,13.1534855718921,11.1359373353607,13.4674145197857,12.5753119211625,12.6085737440721,12.2769312950907,11.3103894065755,13.5034627686799,20.9840885467875,10.7608539884888,19.3383948643468,25.0587715010185,15.6619907574856,15.0714093153274
|short_description=p1@Pdgfc
}}

Latest revision as of 17:46, 25 September 2015

Short description:p1@Pdgfc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdgfc_5end
Coexpression cluster:MCL_coexpression_mm9:2381
Association with transcript: 222bp_to_ENSMUST00000029652, NM_019971, uc008poi.1, uc008poj.1, uc008pok.1_5end
EntrezGene:Pdgfc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdgfc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B910.07
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.38
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C430.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H98.03
adrenal gland, adult.CNhs10508.49-24D711.28
adrenal gland, embryo E14.CNhs11038.406-44C58.15
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C116.70
adrenal gland, neonate N25.CNhs11223.1377-27I310.68
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H123.43
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F519.90
bone (os femoris), neonate N16.CNhs11225.1525-43A69.72
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H78.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B150.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.79
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C625.63
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C926.47
eyeball, embryo E17.CNhs11023.1261-18D416.13
eyeball, neonate N00.CNhs11207.633-15C620.07
eyeball, neonate N01.CNhs11140.1532-43E718.83
eyeball, neonate N02.CNhs11205.1551-44G815.55
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E263.38
forelimb, embryo E12.CNhs10600.359-14H265.05
forelimb, embryo E13.CNhs10589.384-1E253.14
forelimb, embryo E14.CNhs10577.413-26A832.00
forelimb, embryo E15.CNhs11007.437-20E730.31
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B515.23
gonad, embryo E13.CNhs11044.1564-45I622.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E910.56
heart, embryo E12.CNhs11015.353-12F513.60
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D410.42
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E36.54
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G13.81
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I531.57
intestine, embryo E13.CNhs11010.381-16D522.06
intestine, embryo E15.CNhs10602.976-16D813.27
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F79.70
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E912.19
intestine, neonate N06.CNhs11102.688-20B812.82
intestine, neonate N07.CNhs11095.720-20F216.91
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I927.50
kidney, embryo E15.CNhs10997.434-16F815.99
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I221.59
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G725.18
kidney, neonate N10.CNhs11206.758-6D516.88
kidney, neonate N20.CNhs11113.832-19I114.02
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H16.82
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G218.76
lung, embryo E14.CNhs10604.404-26F814.67
lung, embryo E15.CNhs11020.432-17C515.79
lung, embryo E16.CNhs10998.458-17B610.09
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H229.25
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I727.68
ovary, embryo E18.CNhs11040.505-44H729.02
ovary, neonate N00.CNhs11217.1299-22I451.96
oviduct, adult pregnant day01.CNhs10500.988-6G637.61
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G913.96
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E619.45
pituitary gland, embryo E13.CNhs11009.370-44C720.18
pituitary gland, embryo E14.CNhs11037.398-44A518.86
pituitary gland, embryo E15.CNhs10592.427-16B920.22
pituitary gland, embryo E16.CNhs11036.449-43F614.09
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I78.45
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C323.41
skin, neonate N00.CNhs11124.650-25G411.46
skin, neonate N03.CNhs11215.662-22H38.08
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I115.45
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E329.26
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D413.39
stomach, embryo E17.CNhs11006.1035-18D515.26
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B812.95
stomach, neonate N07.CNhs11210.718-18A911.16
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F513.31
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I510.33
testis, embryo E18.CNhs11027.503-18G58.95
testis, neonate N00.CNhs11189.1300-22B715.14
testis, neonate N07.CNhs11222.726-26I417.97
testis, neonate N10.CNhs11204.763-44D99.96
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E416.61
uterus, adult pregnant day19.CNhs10497.590-15F524.21
uterus, adult.CNhs10509.92-27E534.43
vagina, adult.CNhs10502.89-27D521.87
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I824.39
whole body, embryo E12.CNhs10587.857-27C945.49
whole body, embryo E13.CNhs10512.372-23H219.46
whole body, embryo E14.5.CNhs10578.420-27D219.45
whole body, embryo E14.CNhs10519.395-14B113.83
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.31
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I520.98
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C625.06
whole body, neonate N06.CNhs10515.692-21D115.66
whole body, neonate N10.CNhs10518.761-6B415.07





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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