FFCP PHASE1:Mm9::chr14:17408052..17408073,-: Difference between revisions
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{{FFCP|EntrezGene=218772|HGNC=|MCL_coexpression_id=10|UniProt=P22605|association_with_transcript=-66bp_to_ENSMUST00000063750_5end|description=CAGE_peak_5_at_Rarb_5end|id=chr14:17408052..17408073,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.13e-12!18;UBERON:0000948!2.13e-12!18;UBERON:0005498!2.13e-12!18;UBERON:0004140!2.13e-12!18;UBERON:0009881!2.13e-12!18;UBERON:0004141!2.13e-12!18;UBERON:0003084!2.13e-12!18;UBERON:0007005!2.13e-12!18;UBERON:0004139!2.13e-12!18;UBERON:0004291!2.13e-12!18;UBERON:0004535!2.30e-10!23;UBERON:0001009!2.30e-10!23;UBERON:0004111!2.34e-08!122;UBERON:0003103!6.48e-08!43;UBERON:0000025!1.04e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.23e-31,18;UBERON:0000948,1.23e-31,18;UBERON:0005498,1.23e-31,18;UBERON:0004140,1.23e-31,18;UBERON:0009881,1.23e-31,18;UBERON:0004141,1.23e-31,18;UBERON:0003084,1.23e-31,18;UBERON:0007005,1.23e-31,18;UBERON:0004139,1.23e-31,18;UBERON:0004291,1.23e-31,18;UBERON:0004535,2.54e-24,23;UBERON:0001009,2.54e-24,23;UBERON:0004872,2.50e-16,33;UBERON:0003103,3.79e-14,43;UBERON:0010314,1.58e-11,92;UBERON:0003914,7.64e-11,47;UBERON:0004111,6.48e-08,122;UBERON:0000025,1.36e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.766124028511126,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,0,0.284743361598206,0.745597783301202,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.301445281105245,0,0.251333182659351,0.247194967734374,0.86759614151947,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.49790639404823,0.915001205637253,0,0.347648640384553,0.255715457330331,0.83115217823824,1.29793010454206,0.407357455401265,0,0,0.631325567659422,0.260240885925407,0.229902104433473,0,0,0.544291993210623,0.12811372028485,0.749613796477831,0.776110112217047,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,1.24275463521301,0.703578179943289,0.720248245844059,1.42046841351126,0.787056926989615,1.23413690309903,2.55787339225449,1.87791380979733,1.16765342367169,1.6455984991348,3.11918181750281,3.08061476274252,5.11699955988663,2.63460138349261,1.47627060636409,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.561086559122548,0.505892296994058,0.147610147979602,0.470996183524124,0,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0.339490171550376,0.704070744865506,0.837531287209079,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.468846746368813,0,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,1.28528526568723,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.428674070063185,0,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0,0.134864346384821,0,0.785267825952089,0.388844919875379,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,1.13365191807606,0,0,0,0.965947970160952,0.187682475451182,0,0.428736758158132,0,0,0,1.14579102687879,0.343706364687375,1.37016503954128,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0.628839487883947,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,0.760437899670719,0.754505365544305,0.749132059759059,0.512201219238954,0.459483751644906,0.952587382566147,0.579421629724277,0.77163688185482,1.23625770240992,0.735994600671987,1.02860775715625,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p5@Rarb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218772 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=P22605 | |||
|association_with_transcript=-66bp_to_ENSMUST00000063750_5end | |||
|cluster_id=chr14:17408052..17408073,- | |||
|description=CAGE_peak_5_at_Rarb_5end | |||
|id=chr14:17408052..17408073,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.13e-12!18;UBERON:0000948!2.13e-12!18;UBERON:0005498!2.13e-12!18;UBERON:0004140!2.13e-12!18;UBERON:0009881!2.13e-12!18;UBERON:0004141!2.13e-12!18;UBERON:0003084!2.13e-12!18;UBERON:0007005!2.13e-12!18;UBERON:0004139!2.13e-12!18;UBERON:0004291!2.13e-12!18;UBERON:0004535!2.30e-10!23;UBERON:0001009!2.30e-10!23;UBERON:0004111!2.34e-08!122;UBERON:0003103!6.48e-08!43;UBERON:0000025!1.04e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.23e-31,18;UBERON:0000948,1.23e-31,18;UBERON:0005498,1.23e-31,18;UBERON:0004140,1.23e-31,18;UBERON:0009881,1.23e-31,18;UBERON:0004141,1.23e-31,18;UBERON:0003084,1.23e-31,18;UBERON:0007005,1.23e-31,18;UBERON:0004139,1.23e-31,18;UBERON:0004291,1.23e-31,18;UBERON:0004535,2.54e-24,23;UBERON:0001009,2.54e-24,23;UBERON:0004872,2.50e-16,33;UBERON:0003103,3.79e-14,43;UBERON:0010314,1.58e-11,92;UBERON:0003914,7.64e-11,47;UBERON:0004111,6.48e-08,122;UBERON:0000025,1.36e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.766124028511126,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,0,0.284743361598206,0.745597783301202,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.301445281105245,0,0.251333182659351,0.247194967734374,0.86759614151947,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.49790639404823,0.915001205637253,0,0.347648640384553,0.255715457330331,0.83115217823824,1.29793010454206,0.407357455401265,0,0,0.631325567659422,0.260240885925407,0.229902104433473,0,0,0.544291993210623,0.12811372028485,0.749613796477831,0.776110112217047,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,1.24275463521301,0.703578179943289,0.720248245844059,1.42046841351126,0.787056926989615,1.23413690309903,2.55787339225449,1.87791380979733,1.16765342367169,1.6455984991348,3.11918181750281,3.08061476274252,5.11699955988663,2.63460138349261,1.47627060636409,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.561086559122548,0.505892296994058,0.147610147979602,0.470996183524124,0,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0.339490171550376,0.704070744865506,0.837531287209079,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0.321101179975584,0.468846746368813,0,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,1.28528526568723,0.141940085208269,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.428674070063185,0,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0,0.134864346384821,0,0.785267825952089,0.388844919875379,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,1.13365191807606,0,0,0,0.965947970160952,0.187682475451182,0,0.428736758158132,0,0,0,1.14579102687879,0.343706364687375,1.37016503954128,0,0,0.900642406448441,0,0.51776031175182,0,0,0,0,0.628839487883947,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,0.760437899670719,0.754505365544305,0.749132059759059,0.512201219238954,0.459483751644906,0.952587382566147,0.579421629724277,0.77163688185482,1.23625770240992,0.735994600671987,1.02860775715625,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p5@Rarb | |||
}} |
Latest revision as of 18:04, 25 September 2015
Short description: | p5@Rarb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rarb_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | -66bp_to_ENSMUST00000063750_5end |
EntrezGene: | Rarb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.23e-31 | 18 |
heart | 1.23e-31 | 18 |
primitive heart tube | 1.23e-31 | 18 |
primary heart field | 1.23e-31 | 18 |
anterior lateral plate mesoderm | 1.23e-31 | 18 |
heart tube | 1.23e-31 | 18 |
heart primordium | 1.23e-31 | 18 |
cardiac mesoderm | 1.23e-31 | 18 |
cardiogenic plate | 1.23e-31 | 18 |
heart rudiment | 1.23e-31 | 18 |
cardiovascular system | 2.54e-24 | 23 |
circulatory system | 2.54e-24 | 23 |
splanchnic layer of lateral plate mesoderm | 2.50e-16 | 33 |
compound organ | 3.79e-14 | 43 |
structure with developmental contribution from neural crest | 1.58e-11 | 92 |
epithelial tube | 7.64e-11 | 47 |
anatomical conduit | 6.48e-08 | 122 |
tube | 1.36e-07 | 114 |