FFCP PHASE1:Mm9::chr10:127238201..127238245,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19683,380674 | |EntrezGene=19683,380674 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=175 | |MCL_coexpression_id=175 | ||
|TSSclassifier=NA | |||
|UniProt=O54909,D6RFT0,D6RFQ4,Q76LB8 | |UniProt=O54909,D6RFT0,D6RFQ4,Q76LB8 | ||
|association_with_transcript=0bp_to_ENSMUST00000071646,ENSMUST00000125163,ENSMUST00000155739,NM_009040,uc007hkq.2,uc007hkr.2,uc011xpv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000071646,ENSMUST00000125163,ENSMUST00000155739,NM_009040,uc007hkq.2,uc007hkr.2,uc011xpv.1_5end | ||
|cluster_id=chr10:127238201..127238245,+ | |||
|description=CAGE_peak_1_at_Rdh16_5end,CAGE_peak_1_at_Rdh18-ps_5end | |description=CAGE_peak_1_at_Rdh16_5end,CAGE_peak_1_at_Rdh18-ps_5end | ||
|id=chr10:127238201..127238245,+ | |id=chr10:127238201..127238245,+ |
Latest revision as of 18:13, 25 September 2015
Short description: | p1@Rdh16, p1@Rdh18-ps |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rdh16_5end, CAGE_peak_1_at_Rdh18-ps_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | 0bp_to_ENSMUST00000071646, ENSMUST00000125163, ENSMUST00000155739, NM_009040, uc007hkq.2, uc007hkr.2, uc011xpv.1_5end |
EntrezGene: | 19683,380674 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Rdh16p1@Rdh18-ps |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 2.24e-14 | 25 |
endodermal cell | 1.22e-11 | 20 |
intestinal epithelial cell | 5.40e-11 | 9 |
epithelial cell of alimentary canal | 5.40e-11 | 9 |
hepatocyte | 2.98e-08 | 5 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
mucosa | 1.29e-20 | 15 |
intestinal mucosa | 1.28e-17 | 13 |
wall of intestine | 1.28e-17 | 13 |
gastrointestinal system mucosa | 1.28e-17 | 13 |
liver | 5.38e-13 | 22 |
epithelial sac | 5.38e-13 | 22 |
digestive gland | 5.38e-13 | 22 |
epithelium of foregut-midgut junction | 5.38e-13 | 22 |
anatomical boundary | 5.38e-13 | 22 |
hepatobiliary system | 5.38e-13 | 22 |
Showing 1 to 10 of 47 entries