FFCP PHASE1:Mm9::chr10:31165655..31165700,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:31165655..31165700,-
|short_description=p1@Tpd52l1
|description=CAGE_peak_1_at_Tpd52l1_5end
|association_with_transcript=26bp_to_ENSMUST00000000305,ENSMUS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21987 | |EntrezGene=21987 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O54818,B2RUC1,Q3V2G6 | |UniProt=O54818,B2RUC1,Q3V2G6 | ||
|association_with_transcript=26bp_to_ENSMUST00000000305,ENSMUST00000169276,NM_009413,uc007ets.1,uc007ett.1,uc011xci.1,uc011xcj.1_5end | |||
|cluster_id=chr10:31165655..31165700,- | |||
|description=CAGE_peak_1_at_Tpd52l1_5end | |||
|id=chr10:31165655..31165700,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.49e-10!71;UBERON:0003075!3.49e-10!71;UBERON:0007284!3.49e-10!71;UBERON:0003101!7.50e-10!16;UBERON:0000079!7.50e-10!16;UBERON:0004121!8.36e-10!102;UBERON:0000924!8.36e-10!102;UBERON:0006601!8.36e-10!102;UBERON:0003135!3.59e-09!15;UBERON:0000991!3.77e-09!18;UBERON:0005564!3.77e-09!18;UBERON:0005156!6.98e-09!26;UBERON:0000990!6.98e-09!26;UBERON:0004176!1.07e-08!17;UBERON:0009196!1.07e-08!17;UBERON:0009117!1.07e-08!17;UBERON:0000473!1.78e-08!14;UBERON:0000468!2.39e-08!333;UBERON:0001017!5.34e-08!73;UBERON:0005743!5.34e-08!73;UBERON:0003133!8.52e-08!24;UBERON:0000489!8.95e-08!21;UBERON:0001049!1.03e-07!52;UBERON:0005068!1.03e-07!52;UBERON:0006241!1.03e-07!52;UBERON:0007135!1.03e-07!52;UBERON:0000033!3.64e-07!63;UBERON:0000073!3.78e-07!75;UBERON:0001016!3.78e-07!75;UBERON:0002616!7.84e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,5.79e-10,16;UBERON:0000079,5.79e-10,16;UBERON:0003135,2.83e-09,15;UBERON:0000991,2.97e-09,18;UBERON:0005564,2.97e-09,18;UBERON:0004176,8.56e-09,17;UBERON:0009196,8.56e-09,17;UBERON:0009117,8.56e-09,17;UBERON:0005156,1.04e-08,26;UBERON:0000990,1.04e-08,26;UBERON:0000473,1.43e-08,14;UBERON:0000073,2.20e-08,54;UBERON:0010371,6.24e-08,73;UBERON:0000489,7.37e-08,21;UBERON:0002346,9.87e-08,64;UBERON:0003075,9.87e-08,64;UBERON:0007284,9.87e-08,64;UBERON:0001017,1.22e-07,73;UBERON:0003133,1.28e-07,24;UBERON:0004121,1.75e-07,95;UBERON:0000924,1.75e-07,95;UBERON:0006601,1.75e-07,95;UBERON:0001049,2.18e-07,52;UBERON:0005068,2.18e-07,52;UBERON:0006241,2.18e-07,52;UBERON:0007135,2.18e-07,52;UBERON:0001016,9.06e-07,75 | |||
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| ||
|short_description=p1@Tpd52l1 | |||
}} | }} |
Latest revision as of 22:54, 25 September 2015
Short description: | p1@Tpd52l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tpd52l1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENSMUST00000000305, ENSMUST00000169276, NM_009413, uc007ets.1, uc007ett.1, uc011xci.1, uc011xcj.1_5end |
EntrezGene: | Tpd52l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male organism | 5.79e-10 | 16 |
male reproductive system | 5.79e-10 | 16 |
male reproductive organ | 2.83e-09 | 15 |
gonad | 2.97e-09 | 18 |
gonad primordium | 2.97e-09 | 18 |
external genitalia | 8.56e-09 | 17 |
indifferent external genitalia | 8.56e-09 | 17 |
indifferent gonad | 8.56e-09 | 17 |
reproductive structure | 1.04e-08 | 26 |
reproductive system | 1.04e-08 | 26 |
testis | 1.43e-08 | 14 |
regional part of nervous system | 2.20e-08 | 54 |
ecto-epithelium | 6.24e-08 | 73 |
cavitated compound organ | 7.37e-08 | 21 |
neurectoderm | 9.87e-08 | 64 |
neural plate | 9.87e-08 | 64 |
presumptive neural plate | 9.87e-08 | 64 |
central nervous system | 1.22e-07 | 73 |
reproductive organ | 1.28e-07 | 24 |
ectoderm-derived structure | 1.75e-07 | 95 |
ectoderm | 1.75e-07 | 95 |
presumptive ectoderm | 1.75e-07 | 95 |
neural tube | 2.18e-07 | 52 |
neural rod | 2.18e-07 | 52 |
future spinal cord | 2.18e-07 | 52 |
neural keel | 2.18e-07 | 52 |
nervous system | 9.06e-07 | 75 |