FFCP PHASE1:Mm9::chr8:91160051..91160062,-: Difference between revisions
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|id=chr8:91160051..91160062,-
|short_description=p3@Snx20
|description=CAGE_peak_3_at_Snx20_5end
|association_with_transcript=-24bp_to_ENSMUST00000034087,NM_027840,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71607 | |EntrezGene=71607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D2Y5 | |UniProt=Q9D2Y5 | ||
|association_with_transcript=-24bp_to_ENSMUST00000034087,NM_027840,uc009mrp.1_5end | |||
|cluster_id=chr8:91160051..91160062,- | |||
|description=CAGE_peak_3_at_Snx20_5end | |||
|id=chr8:91160051..91160062,- | |||
|ontology_enrichment_celltype=CL:0000239!4.69e-08!6;CL:0000677!4.69e-08!6;CL:0000212!4.69e-08!6;CL:0000584!4.69e-08!6;CL:0002563!1.42e-07!9;CL:0002251!1.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.35e-25,6;CL:0000677,9.35e-25,6;CL:0000584,9.35e-25,6;CL:0000075,3.71e-21,7;CL:0002563,2.36e-16,9;CL:0002251,2.36e-16,9;CL:0000682,5.18e-14,3;CL:0000066,1.53e-12,25;CL:0000473,2.85e-10,7;CL:0002076,1.32e-09,15;CL:0000223,4.57e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.83e-13!15;UBERON:0001242!4.54e-11!13;UBERON:0000060!4.54e-11!13;UBERON:0001262!4.54e-11!13;UBERON:0004786!4.54e-11!13;UBERON:0004923!1.35e-10!24;UBERON:0000160!2.87e-10!43;UBERON:0005409!8.17e-08!59;UBERON:0003350!1.42e-07!9;UBERON:0004808!1.42e-07!9;UBERON:0001277!1.42e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.65e-21,15;UBERON:0003350,2.36e-16,9;UBERON:0004808,2.36e-16,9;UBERON:0001277,2.36e-16,9;UBERON:0001242,4.61e-15,13;UBERON:0001262,4.61e-15,13;UBERON:0004786,4.61e-15,13;UBERON:0000485,2.73e-13,11;UBERON:0004923,1.00e-12,24;UBERON:0000160,1.86e-09,31;UBERON:0001962,4.71e-09,2;UBERON:0001961,4.71e-09,2;UBERON:0001744,4.71e-09,2 | |||
|phase1_expression=0,2.79180326111489,3.18499467572675,4.53696316960245,4.00716583957078,1.51091344720701,1.16806320297763,0.387369970324729,0.422366166455,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0.42438965179803,0,0,0,1.43993180514066,2.06468352960453,6.89078356938024,6.8921919385452,4.30942465371778,0.380046838912748,0.756090389279792,2.43903561720835,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.776813650941515,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,1.02182822083437,0.599075622529601,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.58670339998127,0,0,0,0.403367049246685,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,2.71952841909355,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0.228778173206523,1.18984900995699,1.53946597556024,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,3.18499467572675,4.53696316960245,4.00716583957078,1.51091344720701,1.16806320297763,0.387369970324729,0.422366166455,0,0,0,0,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0.548457734422955,0.42438965179803,0,0,0,1.43993180514066,2.06468352960453,6.89078356938024,6.8921919385452,4.30942465371778,0.380046838912748,0.756090389279792,2.43903561720835,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.776813650941515,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,1.02182822083437,0.599075622529601,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.58670339998127,0,0,0,0.403367049246685,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,2.71952841909355,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.341741761595705,0,0,0.188368457004691,0.136694227721025,0.228778173206523,1.18984900995699,1.53946597556024,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Snx20 | |||
}} | }} |
Latest revision as of 23:21, 25 September 2015
Short description: | p3@Snx20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snx20_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -24bp_to_ENSMUST00000034087, NM_027840, uc009mrp.1_5end |
EntrezGene: | Snx20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.35e-25 | 6 |
gut absorptive cell | 9.35e-25 | 6 |
enterocyte | 9.35e-25 | 6 |
columnar/cuboidal epithelial cell | 3.71e-21 | 7 |
intestinal epithelial cell | 2.36e-16 | 9 |
epithelial cell of alimentary canal | 2.36e-16 | 9 |
M cell of gut | 5.18e-14 | 3 |
epithelial cell | 1.53e-12 | 25 |
defensive cell | 2.85e-10 | 7 |
endo-epithelial cell | 1.32e-09 | 15 |
endodermal cell | 4.57e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.65e-21 | 15 |
epithelium of mucosa | 2.36e-16 | 9 |
gastrointestinal system epithelium | 2.36e-16 | 9 |
intestinal epithelium | 2.36e-16 | 9 |
intestinal mucosa | 4.61e-15 | 13 |
wall of intestine | 4.61e-15 | 13 |
gastrointestinal system mucosa | 4.61e-15 | 13 |
simple columnar epithelium | 2.73e-13 | 11 |
organ component layer | 1.00e-12 | 24 |
intestine | 1.86e-09 | 31 |
gut-associated lymphoid tissue | 4.71e-09 | 2 |
mucosa-associated lymphoid tissue | 4.71e-09 | 2 |
lymphoid tissue | 4.71e-09 | 2 |