Personal tools

FFCP PHASE1:Mm9::chr19:54019111..54019122,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=100503572|HGNC=|MCL_coexpression_id=1372|UniProt=|association_with_transcript=0bp_to_ENSMUST00000135402,NM_001195338,NM_001195348,uc008hxe.2,uc008hxf.2_5end|description=CAGE_peak_4_at_Bbip1_5end|id=chr19:54019111..54019122,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,5.44e-09,3;CL:0002006,5.44e-09,3;CL:0002024,5.44e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.32e-09,3;DOID:4045,2.32e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.41e-07,6;UBERON:0004457,2.41e-07,6;UBERON:0000042,2.41e-07,6;UBERON:0004854,2.41e-07,6;UBERON:0009034,2.41e-07,6;UBERON:0002095,2.41e-07,6;UBERON:0004782,2.41e-07,6;UBERON:0003281,2.41e-07,6;UBERON:0009664,2.41e-07,6;UBERON:0002296,2.41e-07,6;UBERON:0005602,2.41e-07,6;UBERON:0001179,2.41e-07,6;UBERON:0006293,2.41e-07,6|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0,0.500895729946347,0,0.467225281191051,0.258246646883153,0,0.234064526321993,0,0,0.342401459862411,0.174840804837995,1.66554880907831,3.64455481301687,9.79386629379405,0.157731082679119,0.548457734422955,0.84877930359606,0.17008658030214,0.198581902401771,0.522399578277871,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.756090389279792,0.886922042621219,0.635030673459631,0.61506478758457,0,0,0.664938581433969,0,5.4409111995798,3.906676722619,3.66466620781659,6.47054636834116,1.36609096991689,3.88408282424923,0.377690453926732,0.304130793658544,0.367093504323363,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0,1.02903774414379,0.85960031981627,0,0.202316460859598,0,0.633831403506179,1.0165335962074,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.302904773332736,0.302286240427142,0,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0.852151612890289,0,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.11418387971906,0.258937883647172,0.148442139064825,0.693941307064543,0.608930956624282,0,0,0.352766121407114,0,0.247194967734374,0.289198713839823,1.76922110389975,0.647067399789637,0.441683036920787,0.484875253135222,0,0,0,0,0.11981512450592,0,0.127070227073065,0.449371918214468,0.915001205637253,0.125654352112864,0.173824320192276,0,0.41557608911912,0,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.650602214813519,1.37941262660084,0.180062129805349,0.60281927134286,0.136072998302656,0.2562274405697,0.374806898238915,0.258703370739016,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,0,0,0.411564272815887,0.199034266818493,2.1066395619397,0,0,0.414251545071004,0.469052119962192,1.08037236876609,0.23674473558521,0.590292695242212,0,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.243206428637567,0,0.219550115291051,0.268412837520744,0.210289948564127,0.205809224758569,1.32167513193519,0.528901133327089,0.426576501070468,0.696710015581316,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0.949058123089023,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0.216138049874694,0.796565093017469,0.379335801906163,0.342745537829186,0,0.407302655690628,0,0.210407459670956,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,2.8363667971736,1.57247196090562,2.02375901146368,2.02860121388503,2.17059443777175,1.01850340712568,0.287696137450811,0.162135226775035,1.92192989231657,0,1.11642284300551,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0.947457058852424,0.814824882210129,0.339490171550376,0,0.837531287209079,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0.491764273019036,0,0.160550589987792,0.468846746368813,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0.492422699235184,0.291480836629851,0,1.87957968877638,0,0.925972636848558,1.88368457004691,2.59719032669948,2.28778173206523,0,0.139951452323658,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0,0,0.388844919875379,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,0.524296722128554,0.241584120826006,0.864090018773596,0,0.202725215290164,0.308132871494482,0.649604114888975,0.179026695667481,0.596044064343795,0.360586348559907,0,0.504832249740738,0.609654453239999,0.100826185136841,0,0.288635524920988,0.233753804363138,0.226730383615211,0.665957860122194,0.986852422704233,0.839423081820392,0,0.187682475451182,0.183151624267265,0,0.501572104035363,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.415149390336707,0.399024873401031,1.02440163452481,0.243106717068294,1.04806581313991,0.735374033800057,0,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.256100609619477,0.459483751644906,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,1.43061713968393,0.726732083161643,0.188218760830661,0.169229215783353,0.182927972872773,0.789209134313529,0.679020569229309,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p4@Bbip1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=100503572
|HGNC=
|MCL_coexpression_id=1372
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000135402,NM_001195338,NM_001195348,uc008hxe.2,uc008hxf.2_5end
|cluster_id=chr19:54019111..54019122,-
|description=CAGE_peak_4_at_Bbip1_5end
|id=chr19:54019111..54019122,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002027,5.44e-09,3;CL:0002006,5.44e-09,3;CL:0002024,5.44e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,2.32e-09,3;DOID:4045,2.32e-09,3
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.41e-07,6;UBERON:0004457,2.41e-07,6;UBERON:0000042,2.41e-07,6;UBERON:0004854,2.41e-07,6;UBERON:0009034,2.41e-07,6;UBERON:0002095,2.41e-07,6;UBERON:0004782,2.41e-07,6;UBERON:0003281,2.41e-07,6;UBERON:0009664,2.41e-07,6;UBERON:0002296,2.41e-07,6;UBERON:0005602,2.41e-07,6;UBERON:0001179,2.41e-07,6;UBERON:0006293,2.41e-07,6
|phase1_expression=0.320297694209588,0.348975407639361,1.36499771816861,0,0.500895729946347,0,0.467225281191051,0.258246646883153,0,0.234064526321993,0,0,0.342401459862411,0.174840804837995,1.66554880907831,3.64455481301687,9.79386629379405,0.157731082679119,0.548457734422955,0.84877930359606,0.17008658030214,0.198581902401771,0.522399578277871,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.756090389279792,0.886922042621219,0.635030673459631,0.61506478758457,0,0,0.664938581433969,0,5.4409111995798,3.906676722619,3.66466620781659,6.47054636834116,1.36609096991689,3.88408282424923,0.377690453926732,0.304130793658544,0.367093504323363,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0,1.02903774414379,0.85960031981627,0,0.202316460859598,0,0.633831403506179,1.0165335962074,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0.367472397644862,0.287536413054709,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.302904773332736,0.302286240427142,0,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0.852151612890289,0,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.11418387971906,0.258937883647172,0.148442139064825,0.693941307064543,0.608930956624282,0,0,0.352766121407114,0,0.247194967734374,0.289198713839823,1.76922110389975,0.647067399789637,0.441683036920787,0.484875253135222,0,0,0,0,0.11981512450592,0,0.127070227073065,0.449371918214468,0.915001205637253,0.125654352112864,0.173824320192276,0,0.41557608911912,0,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.650602214813519,1.37941262660084,0.180062129805349,0.60281927134286,0.136072998302656,0.2562274405697,0.374806898238915,0.258703370739016,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,0,0,0.411564272815887,0.199034266818493,2.1066395619397,0,0,0.414251545071004,0.469052119962192,1.08037236876609,0.23674473558521,0.590292695242212,0,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0.243206428637567,0,0.219550115291051,0.268412837520744,0.210289948564127,0.205809224758569,1.32167513193519,0.528901133327089,0.426576501070468,0.696710015581316,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0.949058123089023,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0.216138049874694,0.796565093017469,0.379335801906163,0.342745537829186,0,0.407302655690628,0,0.210407459670956,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,2.8363667971736,1.57247196090562,2.02375901146368,2.02860121388503,2.17059443777175,1.01850340712568,0.287696137450811,0.162135226775035,1.92192989231657,0,1.11642284300551,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0.947457058852424,0.814824882210129,0.339490171550376,0,0.837531287209079,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0.491764273019036,0,0.160550589987792,0.468846746368813,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0.492422699235184,0.291480836629851,0,1.87957968877638,0,0.925972636848558,1.88368457004691,2.59719032669948,2.28778173206523,0,0.139951452323658,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0,0,0.388844919875379,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.5208175393758,0.524296722128554,0.241584120826006,0.864090018773596,0,0.202725215290164,0.308132871494482,0.649604114888975,0.179026695667481,0.596044064343795,0.360586348559907,0,0.504832249740738,0.609654453239999,0.100826185136841,0,0.288635524920988,0.233753804363138,0.226730383615211,0.665957860122194,0.986852422704233,0.839423081820392,0,0.187682475451182,0.183151624267265,0,0.501572104035363,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.415149390336707,0.399024873401031,1.02440163452481,0.243106717068294,1.04806581313991,0.735374033800057,0,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.256100609619477,0.459483751644906,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,1.43061713968393,0.726732083161643,0.188218760830661,0.169229215783353,0.182927972872773,0.789209134313529,0.679020569229309,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p4@Bbip1
}}

Latest revision as of 23:24, 25 September 2015

Short description:p4@Bbip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Bbip1_5end
Coexpression cluster:MCL_coexpression_mm9:1372
Association with transcript: 0bp_to_ENSMUST00000135402, NM_001195338, NM_001195348, uc008hxe.2, uc008hxf.2_5end
EntrezGene:Bbip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Bbip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
spleen2.41e-076
cavity lining2.41e-076
serous membrane2.41e-076
gastrointestinal system mesentery2.41e-076
stomach region2.41e-076
mesentery2.41e-076
gastrointestinal system serosa2.41e-076
mesentery of stomach2.41e-076
gut mesentery2.41e-076
dorsal mesentery2.41e-076
dorsal mesogastrium2.41e-076
peritoneal cavity2.41e-076
spleen primordium2.41e-076

Disease
Ontology termp-valuen
musculoskeletal system cancer2.32e-093
muscle cancer2.32e-093
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:54019111..54019122,-&oldid=4220152"