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FFCP PHASE1:Mm9::chr3:95330722..95330733,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:95330722..95330733,+
|DHSsupport=NA
|short_description=p3@Ctss
|DPIdataset=NA
|description=CAGE_peak_3_at_Ctss_5end
|association_with_transcript=14bp_to_ENSMUST00000015667,ENSMUST00000116304,NM_021281,uc008qjz.2,uc008qka.2_5end
|EntrezGene=13040
|EntrezGene=13040
|HGNC=
|HGNC=
|MCL_coexpression_id=67
|TSSclassifier=NA
|UniProt=Q3UD32,O70370,Q8BSZ5
|UniProt=Q3UD32,O70370,Q8BSZ5
|association_with_transcript=14bp_to_ENSMUST00000015667,ENSMUST00000116304,NM_021281,uc008qjz.2,uc008qka.2_5end
|cluster_id=chr3:95330722..95330733,+
|description=CAGE_peak_3_at_Ctss_5end
|id=chr3:95330722..95330733,+
|ontology_enrichment_celltype=CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000988,2.07e-10,32;CL:0002032,2.07e-10,32;CL:0000037,2.07e-10,32;CL:0000837,2.07e-10,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0002031,3.72e-08,25;CL:0000049,1.17e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.30e-09!59;UBERON:0002193!2.94e-09!48;UBERON:0002371!1.10e-08!16;UBERON:0000160!2.05e-08!43;UBERON:0000344!2.85e-08!15;UBERON:0002405!4.10e-08!70;UBERON:0002390!7.11e-08!45;UBERON:0003061!7.11e-08!45;UBERON:0001007!7.40e-08!128;UBERON:0001555!7.40e-08!128;UBERON:0007026!7.40e-08!128;UBERON:0004923!9.87e-08!24;UBERON:0001474!3.02e-07!22;UBERON:0004765!3.02e-07!22;UBERON:0001434!3.02e-07!22;UBERON:0001242!3.33e-07!13;UBERON:0000060!3.33e-07!13;UBERON:0001262!3.33e-07!13;UBERON:0004786!3.33e-07!13;UBERON:0004119!3.49e-07!130;UBERON:0000925!3.49e-07!130;UBERON:0006595!3.49e-07!130;UBERON:0004921!3.67e-07!126;UBERON:0004185!3.67e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.15e-17,47;UBERON:0000160,4.23e-17,31;UBERON:0004923,1.75e-11,24;UBERON:0000344,2.03e-11,15;UBERON:0002371,4.53e-11,16;UBERON:0001242,7.43e-10,13;UBERON:0001262,7.43e-10,13;UBERON:0004786,7.43e-10,13;UBERON:0002193,2.13e-09,48;UBERON:0002405,2.13e-09,48;UBERON:0001474,1.52e-08,22;UBERON:0004765,1.52e-08,22;UBERON:0001434,1.52e-08,22;UBERON:0002384,2.15e-08,46;UBERON:0001007,3.21e-08,116;UBERON:0001555,3.21e-08,116;UBERON:0007026,3.21e-08,116;UBERON:0002204,3.54e-08,32;UBERON:0004119,8.11e-08,118;UBERON:0000925,8.11e-08,118;UBERON:0006595,8.11e-08,118;UBERON:0002390,1.22e-07,45;UBERON:0003061,1.22e-07,45;UBERON:0004921,2.47e-07,114
|phase1_expression=0.160148847104794,6.97950815278722,9.09998478779072,6.95667686005709,5.00895729946347,2.18243053485457,2.33612640595526,10.0716192284429,1.54867594366833,0.234064526321993,0.856089841127525,0.319088635981346,8.21763503669787,7.69299541287177,4.33042690360362,5.26435695213547,1.39912375625629,24.1328556499052,21.6640805097067,18.2487550273153,0.510259740906419,1.58865521921416,2.61199789138935,9.43955294481099,8.48814339948529,8.6134794617253,10.3382879078178,5.38678081714723,19.5724122040065,16.6339885641554,11.3082560434205,0,0,0,1.73310971850765,2.49351968037739,2.24586291888606,4.60384793810598,14.0640362014284,7.85285615960697,2.94115744015507,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,22.4828692117367,5.80289713609076,4.36921938885203,0,1.14613375975503,1.03134418455488,0,0,0,0,0,19.3478439215501,25.7105254267413,18.4724829885986,2.99600110518405,0.768436610643109,0.103689612308478,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.614426133024974,0,0.182975287204819,0,0.837548997004143,1.12552522006336,0.763991238884051,0.589257170947335,0.142371680799103,0.372798891650601,0.227178579999552,0.151143120213571,0,2.58127163094416,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.96878087269556,11.6522047641227,2.22663208597237,0,0,0,0.60289056221049,0.117588707135705,0.753999547978053,0.247194967734374,1.15679485535929,0.884610551949874,0.485300549842228,1.10420759230197,3.39412677194655,5.59175283654366,0,0,6.89734049063197,3.95389910869537,4.19931911695385,3.93917703926501,0.299581278809645,0.457500602818626,0.125654352112864,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,0.305518091550949,2.86136032403214,1.26361379216837,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.411564272815887,0,5.61770549850588,1.02939162845886,2.27330799516474,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.486412857275134,0.584799949701329,1.3173006917463,1.07365135008297,0.841159794256509,0.205809224758569,24.7814087237848,5.55346189993443,0,0.232236671860439,0.128867461322093,0.605050573870028,2.44615848229357,4.56541502670142,6.64340686162316,19.1050787479853,22.6201687920243,25.068515477185,25.3453313254856,10.7858329038507,11.2391785934841,13.3424653080426,0,0,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,0.964708639009667,1.78238096246994,0.575392274901621,1.13494658742525,0.823684239564244,0,1.11642284300551,0.936113019343682,1.26289438973556,0.896987067609561,1.92977408545347,4.98833613449833,0,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,2.36452716159286,0.221464689648775,0.956728611944923,1.63863314715738,3.9717545829156,4.05017364028232,46.7452980211744,36.4416808158535,0.491764273019036,1.10374698521893,0.963303539926752,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,1.48473110675282,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,4.13485269069154,1.09060118843252,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.532020700926821,0,0.164549020602121,0,0,0,0.220528398054962,2.30840754118072,0.484393280087717,0.482503399425247,0.119372344003136,0.492422699235184,13.4081184849731,0.927126510052548,3.58828849675491,2.06386867963222,1.85194527369712,2.82552685507037,2.05041341581538,4.57556346413045,2.20971958992012,4.05859211738608,2.76399947608848,0,0,0.203319467126849,0.324016022465404,0.209088296014469,1.09181281873089,0.674321731924103,1.07449492442937,1.04702376793612,14.2576470620972,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.168956125490778,0,0.39061315453185,0.104859344425711,0,0.576060012515731,1.58005560314089,0.810900861160657,0.205421914329655,0.25984164595559,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.533447646584999,0.806609481094724,1.65678397257579,1.34696578296461,1.40252282617883,0,0,0,0,0.965947970160952,0.563047426353546,1.64836461840539,0.643105137237198,0,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,1.26348605881899,0.50695859978048,0.188626341386076,0.655490552289177,0.192075457214608,0.459483751644906,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0.715308569841963,0.145346416632329,0.658765662907314,0.423073039458382,0.182927972872773,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,0.0985044823755635,0.818462086339379,0.154936841185966,1.35034627686799,0.499621155875892,1.16965804222704,1.50409737833809,0.765153328275374,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,6.97950815278722,9.09998478779072,6.95667686005709,5.00895729946347,2.18243053485457,2.33612640595526,10.0716192284429,1.54867594366833,0.234064526321993,0.856089841127525,0.319088635981346,8.21763503669787,7.69299541287177,4.33042690360362,5.26435695213547,1.39912375625629,24.1328556499052,21.6640805097067,18.2487550273153,0.510259740906419,1.58865521921416,2.61199789138935,9.43955294481099,8.48814339948529,8.6134794617253,10.3382879078178,5.38678081714723,19.5724122040065,16.6339885641554,11.3082560434205,0,0,0,1.73310971850765,2.49351968037739,2.24586291888606,4.60384793810598,14.0640362014284,7.85285615960697,2.94115744015507,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,22.4828692117367,5.80289713609076,4.36921938885203,0,1.14613375975503,1.03134418455488,0,0,0,0,0,19.3478439215501,25.7105254267413,18.4724829885986,2.99600110518405,0.768436610643109,0.103689612308478,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.614426133024974,0,0.182975287204819,0,0.837548997004143,1.12552522006336,0.763991238884051,0.589257170947335,0.142371680799103,0.372798891650601,0.227178579999552,0.151143120213571,0,2.58127163094416,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.96878087269556,11.6522047641227,2.22663208597237,0,0,0,0.60289056221049,0.117588707135705,0.753999547978053,0.247194967734374,1.15679485535929,0.884610551949874,0.485300549842228,1.10420759230197,3.39412677194655,5.59175283654366,0,0,6.89734049063197,3.95389910869537,4.19931911695385,3.93917703926501,0.299581278809645,0.457500602818626,0.125654352112864,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,0.305518091550949,2.86136032403214,1.26361379216837,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.411564272815887,0,5.61770549850588,1.02939162845886,2.27330799516474,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.486412857275134,0.584799949701329,1.3173006917463,1.07365135008297,0.841159794256509,0.205809224758569,24.7814087237848,5.55346189993443,0,0.232236671860439,0.128867461322093,0.605050573870028,2.44615848229357,4.56541502670142,6.64340686162316,19.1050787479853,22.6201687920243,25.068515477185,25.3453313254856,10.7858329038507,11.2391785934841,13.3424653080426,0,0,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,0.964708639009667,1.78238096246994,0.575392274901621,1.13494658742525,0.823684239564244,0,1.11642284300551,0.936113019343682,1.26289438973556,0.896987067609561,1.92977408545347,4.98833613449833,0,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,2.36452716159286,0.221464689648775,0.956728611944923,1.63863314715738,3.9717545829156,4.05017364028232,46.7452980211744,36.4416808158535,0.491764273019036,1.10374698521893,0.963303539926752,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,1.48473110675282,0,0,0,0.377210159511796,0.295301892880773,0.922305443831782,4.13485269069154,1.09060118843252,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.532020700926821,0,0.164549020602121,0,0,0,0.220528398054962,2.30840754118072,0.484393280087717,0.482503399425247,0.119372344003136,0.492422699235184,13.4081184849731,0.927126510052548,3.58828849675491,2.06386867963222,1.85194527369712,2.82552685507037,2.05041341581538,4.57556346413045,2.20971958992012,4.05859211738608,2.76399947608848,0,0,0.203319467126849,0.324016022465404,0.209088296014469,1.09181281873089,0.674321731924103,1.07449492442937,1.04702376793612,14.2576470620972,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.168956125490778,0,0.39061315453185,0.104859344425711,0,0.576060012515731,1.58005560314089,0.810900861160657,0.205421914329655,0.25984164595559,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.533447646584999,0.806609481094724,1.65678397257579,1.34696578296461,1.40252282617883,0,0,0,0,0.965947970160952,0.563047426353546,1.64836461840539,0.643105137237198,0,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,1.26348605881899,0.50695859978048,0.188626341386076,0.655490552289177,0.192075457214608,0.459483751644906,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0.715308569841963,0.145346416632329,0.658765662907314,0.423073039458382,0.182927972872773,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,0.09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|short_description=p3@Ctss
}}
}}

Latest revision as of 23:27, 25 September 2015

Short description:p3@Ctss
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ctss_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 14bp_to_ENSMUST00000015667, ENSMUST00000116304, NM_021281, uc008qjz.2, uc008qka.2_5end
EntrezGene:Ctss
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ctss

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.22
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.69
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.13
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B919.57
Ileum epithelium, pool2.CNhs13232.10253-104C116.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I324.78
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E919.11
intestine, neonate N06.CNhs11102.688-20B822.62
intestine, neonate N07.CNhs11095.720-20F225.07
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G113.34
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A136.44
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I113.41
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I114.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system4.15e-1747
intestine4.23e-1731
organ component layer1.75e-1124
mucosa2.03e-1115
bone marrow4.53e-1116
intestinal mucosa7.43e-1013
wall of intestine7.43e-1013
gastrointestinal system mucosa7.43e-1013
hemolymphoid system2.13e-0948
immune system2.13e-0948
bone element1.52e-0822
skeletal element1.52e-0822
skeletal system1.52e-0822
connective tissue2.15e-0846
digestive system3.21e-08116
digestive tract3.21e-08116
primitive gut3.21e-08116
musculoskeletal system3.54e-0832
endoderm-derived structure8.11e-08118
endoderm8.11e-08118
presumptive endoderm8.11e-08118
hematopoietic system1.22e-0745
blood island1.22e-0745
subdivision of digestive tract2.47e-07114
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