FFCP PHASE1:Mm9::chr5:35104383..35104429,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15194 | |EntrezGene=15194 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=G3X9H5,P42859 | |UniProt=G3X9H5,P42859 | ||
|association_with_transcript=0bp_to_ENSMUST00000080036,ENSMUST00000123755,ENSMUST00000148953,NM_010414,uc008xda.1,uc008xdb.1,uc008xdc.2_5end | |association_with_transcript=0bp_to_ENSMUST00000080036,ENSMUST00000123755,ENSMUST00000148953,NM_010414,uc008xda.1,uc008xdb.1,uc008xdc.2_5end | ||
|cluster_id=chr5:35104383..35104429,+ | |||
|description=CAGE_peak_1_at_Htt_5end | |description=CAGE_peak_1_at_Htt_5end | ||
|id=chr5:35104383..35104429,+ | |id=chr5:35104383..35104429,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.47e-10!94;UBERON:0007811!2.50e-10!86;UBERON:0000955!3.07e-08!50;UBERON:0006238!3.07e-08!50;UBERON:0000033!4.37e-08!63;UBERON:0002616!9.99e-08!49;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10;UBERON:0004121!3.29e-07!102;UBERON:0000924!3.29e-07!102;UBERON:0006601!3.29e-07!102;UBERON:0002020!9.47e-07!34 | |ontology_enrichment_uberon=UBERON:0000153!2.47e-10!94;UBERON:0007811!2.50e-10!86;UBERON:0000955!3.07e-08!50;UBERON:0006238!3.07e-08!50;UBERON:0000033!4.37e-08!63;UBERON:0002616!9.99e-08!49;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10;UBERON:0004121!3.29e-07!102;UBERON:0000924!3.29e-07!102;UBERON:0006601!3.29e-07!102;UBERON:0002020!9.47e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.93e-09,54;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0001049,1.11e-07,52;UBERON:0005068,1.11e-07,52;UBERON:0006241,1.11e-07,52;UBERON:0007135,1.11e-07,52;UBERON:0010371,1.25e-07,73;UBERON:0002346,1.28e-07,64;UBERON:0003075,1.28e-07,64;UBERON:0007284,1.28e-07,64;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0000955,8.64e-07,47;UBERON:0006238,8.64e-07,47;UBERON:0002020,9.47e-07,34 | |||
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| ||
|short_description=p1@Htt | |short_description=p1@Htt | ||
}} | }} |
Latest revision as of 23:40, 25 September 2015
Short description: | p1@Htt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Htt_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000080036, ENSMUST00000123755, ENSMUST00000148953, NM_010414, uc008xda.1, uc008xdb.1, uc008xdc.2_5end |
EntrezGene: | Htt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.93e-09 | 54 |
ectoderm-derived structure | 3.18e-08 | 95 |
ectoderm | 3.18e-08 | 95 |
presumptive ectoderm | 3.18e-08 | 95 |
neural tube | 1.11e-07 | 52 |
neural rod | 1.11e-07 | 52 |
future spinal cord | 1.11e-07 | 52 |
neural keel | 1.11e-07 | 52 |
ecto-epithelium | 1.25e-07 | 73 |
neurectoderm | 1.28e-07 | 64 |
neural plate | 1.28e-07 | 64 |
presumptive neural plate | 1.28e-07 | 64 |
occipital lobe | 2.48e-07 | 10 |
visual cortex | 2.48e-07 | 10 |
neocortex | 2.48e-07 | 10 |
brain | 8.64e-07 | 47 |
future brain | 8.64e-07 | 47 |
gray matter | 9.47e-07 | 34 |