FFCP PHASE1:Mm9::chr3:95659700..95659745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70767 | |EntrezGene=70767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1134 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000161073,uc008qlg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000161073,uc008qlg.1_5end | ||
|cluster_id=chr3:95659700..95659745,- | |||
|description=CAGE_peak_1_at_Prpf3_5end | |description=CAGE_peak_1_at_Prpf3_5end | ||
|id=chr3:95659700..95659745,- | |id=chr3:95659700..95659745,- | ||
|ontology_enrichment_celltype=CL:0002031!1.47e-08!25;CL:0000542!7.20e-08!13;CL:0000051!7.20e-08!13;CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32;CL:0000838!1.44e-07!12;CL:0000084!5.34e-07!11;CL:0000827!5.34e-07!11 | |ontology_enrichment_celltype=CL:0002031!1.47e-08!25;CL:0000542!7.20e-08!13;CL:0000051!7.20e-08!13;CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32;CL:0000838!1.44e-07!12;CL:0000084!5.34e-07!11;CL:0000827!5.34e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.47e-08,25;CL:0000542,7.20e-08,13;CL:0000051,7.20e-08,13;CL:0000988,1.10e-07,32;CL:0002032,1.10e-07,32;CL:0000037,1.10e-07,32;CL:0000837,1.10e-07,32;CL:0000838,1.44e-07,12;CL:0000084,5.34e-07,11;CL:0000827,5.34e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.28e-10!29;UBERON:0001048!8.99e-09!147;UBERON:0002370!1.31e-08!23;UBERON:0000974!1.31e-08!23;UBERON:0004807!1.31e-08!23;UBERON:0005058!1.31e-08!23;UBERON:0003351!1.31e-08!23;UBERON:0009113!1.31e-08!23;UBERON:0003295!1.31e-08!23;UBERON:0009722!1.31e-08!23;UBERON:0005562!1.31e-08!23;UBERON:0007690!1.31e-08!23;UBERON:0002390!1.89e-08!45;UBERON:0003061!1.89e-08!45;UBERON:0002193!6.08e-08!48;UBERON:0003408!6.89e-08!24;UBERON:0006562!1.24e-07!24;UBERON:0001557!1.24e-07!24;UBERON:0001042!1.24e-07!24;UBERON:0008814!1.24e-07!24;UBERON:0009145!1.24e-07!24;UBERON:0003081!9.00e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.28e-10,29;UBERON:0005057,1.28e-10,29;UBERON:0000153,5.30e-09,43;UBERON:0001048,5.85e-09,134;UBERON:0000077,1.04e-08,35;UBERON:0002370,1.31e-08,23;UBERON:0000974,1.31e-08,23;UBERON:0004807,1.31e-08,23;UBERON:0005058,1.31e-08,23;UBERON:0003351,1.31e-08,23;UBERON:0009113,1.31e-08,23;UBERON:0003295,1.31e-08,23;UBERON:0009722,1.31e-08,23;UBERON:0005562,1.31e-08,23;UBERON:0007690,1.31e-08,23;UBERON:0002390,1.89e-08,45;UBERON:0003061,1.89e-08,45;UBERON:0002193,6.08e-08,48;UBERON:0002405,6.08e-08,48;UBERON:0003408,6.89e-08,24;UBERON:0006562,1.24e-07,24;UBERON:0001557,1.24e-07,24;UBERON:0001042,1.24e-07,24;UBERON:0008814,1.24e-07,24;UBERON:0009145,1.24e-07,24;UBERON:0007811,1.90e-07,36 | |||
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| ||
|short_description=p1@Prpf3 | |short_description=p1@Prpf3 | ||
}} | }} |
Latest revision as of 23:56, 25 September 2015
Short description: | p1@Prpf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prpf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1134 |
Association with transcript: | 0bp_to_ENSMUST00000161073, uc008qlg.1_5end |
EntrezGene: | Prpf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.47e-08 | 25 |
lymphocyte | 7.20e-08 | 13 |
common lymphoid progenitor | 7.20e-08 | 13 |
hematopoietic cell | 1.10e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.10e-07 | 32 |
hematopoietic stem cell | 1.10e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.10e-07 | 32 |
lymphoid lineage restricted progenitor cell | 1.44e-07 | 12 |
T cell | 5.34e-07 | 11 |
pro-T cell | 5.34e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.28e-10 | 29 |
immune organ | 1.28e-10 | 29 |
anterior region of body | 5.30e-09 | 43 |
primordium | 5.85e-09 | 134 |
mixed endoderm/mesoderm-derived structure | 1.04e-08 | 35 |
thymus | 1.31e-08 | 23 |
neck | 1.31e-08 | 23 |
respiratory system epithelium | 1.31e-08 | 23 |
hemolymphoid system gland | 1.31e-08 | 23 |
pharyngeal epithelium | 1.31e-08 | 23 |
thymic region | 1.31e-08 | 23 |
pharyngeal gland | 1.31e-08 | 23 |
entire pharyngeal arch endoderm | 1.31e-08 | 23 |
thymus primordium | 1.31e-08 | 23 |
early pharyngeal endoderm | 1.31e-08 | 23 |
hematopoietic system | 1.89e-08 | 45 |
blood island | 1.89e-08 | 45 |
hemolymphoid system | 6.08e-08 | 48 |
immune system | 6.08e-08 | 48 |
gland of gut | 6.89e-08 | 24 |
pharynx | 1.24e-07 | 24 |
upper respiratory tract | 1.24e-07 | 24 |
chordate pharynx | 1.24e-07 | 24 |
pharyngeal arch system | 1.24e-07 | 24 |
pharyngeal region of foregut | 1.24e-07 | 24 |
craniocervical region | 1.90e-07 | 36 |