Personal tools

FFCP PHASE1:Mm9::chr3:95697876..95697897,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=226548
|EntrezGene=226548
|HGNC=
|HGNC=
|MCL_coexpression_id=436
|MCL_coexpression_id=436
|TSSclassifier=NA
|UniProt=Q8BVF7
|UniProt=Q8BVF7
|association_with_transcript=0bp_to_ENSMUST00000015894_5end
|association_with_transcript=0bp_to_ENSMUST00000015894_5end
|cluster_id=chr3:95697876..95697897,+
|description=CAGE_peak_1_at_Aph1a_5end
|description=CAGE_peak_1_at_Aph1a_5end
|id=chr3:95697876..95697897,+
|id=chr3:95697876..95697897,+
|ontology_enrichment_celltype=CL:0000066!3.44e-08!25;CL:0000223!3.55e-07!20
|ontology_enrichment_celltype=CL:0000066!3.44e-08!25;CL:0000223!3.55e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,3.44e-08,25;CL:0000223,3.55e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!3.66e-09!43;UBERON:0000344!2.90e-08!15;UBERON:0001242!5.34e-07!13;UBERON:0000060!5.34e-07!13;UBERON:0001262!5.34e-07!13;UBERON:0004786!5.34e-07!13;UBERON:0005409!9.44e-07!59
|ontology_enrichment_uberon=UBERON:0000160!3.66e-09!43;UBERON:0000344!2.90e-08!15;UBERON:0001242!5.34e-07!13;UBERON:0000060!5.34e-07!13;UBERON:0001262!5.34e-07!13;UBERON:0004786!5.34e-07!13;UBERON:0005409!9.44e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.64e-11,31;UBERON:0000344,2.90e-08,15;UBERON:0005409,1.76e-07,47;UBERON:0001242,5.34e-07,13;UBERON:0001262,5.34e-07,13;UBERON:0004786,5.34e-07,13
|phase1_expression=9.12848428497326,59.6747947063307,63.699893514535,37.2030979907401,49.5886772646884,30.7219067598758,39.4805362606438,11.1046058159756,4.78681655315667,6.55380673701582,10.7867319982068,8.29630453551499,12.6688540149092,12.0640155338216,5.66286595086627,7.28910962603373,13.2916756844348,7.88655413395594,5.89592064504677,8.91218268775863,12.9265801029626,9.92909512008853,9.14199261986274,57.437279782833,74.0991977846959,75.2243872990676,52.9837255275662,49.9893259831263,76.3894146214623,54.438508028145,75.3883736228036,13.9706748161119,15.3766196896143,31.6963362030877,14.4425809875637,18.7845149255096,15.1085323634153,25.1118978442145,21.8773896466664,23.0350447348471,28.8233429135197,20.4913645487534,25.24653835762,20.8988717839458,23.0125633868298,24.778811541827,72.7623950243676,45.3492325271329,42.3994332677531,39.8581293102281,34.2966732982138,47.4383462404406,7.21465206048266,13.7818806982155,8.06625117941913,40.9042503297156,33.5244124728345,36.097046459421,11.1274053472779,9.52183762689659,8.23980824558033,47.4382344896785,52.4683929705572,63.8928799269793,73.1761108299561,77.4423325291249,49.7336183460552,43.0324501960141,8.50254820929517,7.83034442323806,8.62332341540666,15.996455126613,14.7981922437581,8.94182834269164,8.91362880469598,17.4651569455904,13.2139057199266,7.02280359468532,7.98753972932466,8.5726087024626,7.77644970620482,5.2091337055676,11.1673199600552,5.06486349028512,9.77908785771585,8.83885756421003,10.1083893367363,9.69277118291563,21.2790603266247,20.782179029366,25.7979394944493,26.673140186423,24.478968013479,34.5410042648203,32.4888208723835,34.4980703064948,12.9208866521212,25.2236877415525,39.2276866950332,34.9806178765237,15.2110893358815,23.0987659345772,10.1922095882658,28.4426681261332,22.7315593061775,22.2956681618087,24.7706978057244,17.9268691158924,3.10725460376606,8.16431764856536,14.7462527751215,17.354532263792,15.681853813412,18.9910527096304,17.8734834846271,12.6923257242972,20.2699873542187,12.5801440520323,11.4999371753484,12.2942805960031,8.83366073841574,11.1521308221101,59.6453635897991,5.5628351432194,11.1006754611131,44.1940705510863,5.39168060276641,5.39912457894067,6.98886248901856,7.78911324905078,2.74500361691176,9.5497307605777,4.69325664519146,7.41574826257959,8.51930982694196,9.89671704713322,11.4060087512354,12.9383249434497,13.8997517138521,17.2562321826909,6.50602214813519,5.74755261083682,6.66229880279792,6.93242162044289,6.87168641428411,4.86832137082429,9.93238280333126,10.8655415710387,5.6047678162539,5.67318240503458,7.03804496655795,10.0830036916684,6.67313398141435,11.8405736617537,10.2891068203972,8.95654200683219,6.31991868581911,7.97778512055617,6.81992398549422,10.5634143993106,10.3191466391682,12.7844063637321,10.180023630164,12.0026181365916,11.8785676923281,12.3242990717716,15.5598572811779,15.4130251924664,12.5065485934245,13.1333971263276,12.8088719082452,11.5497990066013,13.3925570327541,13.4206418760372,7.14985825118033,8.95270127699774,61.7883124179702,35.4363759329149,9.59797127408553,6.0381534683714,11.3403365963442,20.5717195115809,26.4629872175396,32.3383564391351,34.1660924312048,38.3748564506945,35.9409348584385,30.6392966943372,25.1503672383665,32.357498711552,40.4178153265678,36.0445704590405,10.8110703543257,9.36837803399776,11.270773567308,10.386217720111,10.4734343070518,14.1674356178443,11.4458132194906,16.0895061297766,14.9148791449306,16.0416313098341,29.0523574545406,8.67594549723689,11.0073037263394,9.89393294493356,9.33156558387113,9.64708639009667,11.4581633301639,14.6725030099913,16.3756579042786,18.3956146836015,25.8782771749238,23.4448797031157,24.9630138491648,23.2372567711343,21.8864844496733,37.6305946663426,19.2143317773269,8.7166049414423,11.2445833744998,9.16623463186016,9.62230017982859,15.7455881995307,18.5674039891091,18.3425628986331,13.24135210492,15.0595988961167,14.5103839478313,17.0417847304368,17.9592381140531,22.9992003144603,52.7769493787453,45.6880774407716,13.277635371514,15.1765210467603,9.15138362930414,10.4318401067061,19.180388609071,8.33154059774431,13.566853434899,15.2271110275689,12.2791336707695,13.860190281248,15.5959071857676,15.8522857241746,19.02610297872,19.8733983379692,18.5785255634866,6.10510501201433,13.0584878391607,11.5742642383716,12.8680697889325,14.0224604526655,11.9470624505967,10.4395673546642,12.9999129494843,13.013750503157,15.3556984298002,15.0643222492524,18.6068371081119,11.9966130727577,9.26893183800275,15.8018378967908,17.9211634577498,9.28219889233682,6.12791290356818,7.56256594931503,8.5376731296618,9.85950361145325,10.1083933176096,9.27517851530767,13.1639216481697,19.790221692449,27.2219181353904,29.8683219917986,18.9654422327267,14.5099902588502,12.9171541356724,11.0372652618525,17.1896175364517,20.0251897688975,39.3499129450298,5.7481843623258,9.56876932467975,13.2087595496462,7.9633646768976,6.78126445216888,5.74115756428306,7.32090154260872,6.4591803397665,7.41742697315387,4.83699908315483,34.3681422485441,10.4390877881775,8.3360981522008,12.3126088536853,11.7089445768102,16.1588297172171,14.4304850631758,15.4561962206378,21.7257431846745,51.7163743434254,16.1548221402601,1.69107881605257,15.1011711504419,12.2439282938252,13.8060343724274,14.4659002295059,10.8131920314098,14.4349403534277,10.8069639420479,12.687980675511,7.48910774560619,10.657110231541,3.47612232690996,10.3389859797984,8.11416561602135,7.01572444080093,7.51912121803422,10.3314304486258,6.85114062263822,6.4983391956814,6.5628192466296,5.79171730577999,5.44461399738939,7.01696741326217,5.58028681513911,6.07759891344159,18.5918914564473,17.7588762699252,22.1593225825405,30.3871155618982,13.3300819882211,27.4016414158726,21.6118916635373,29.368467933832,19.0597399533438,8.471277639256,2.30162618253588,6.30185064783336,9.10821866421544,8.22099023724771,6.7985450765073,4.72515750162264,5.85417564191487,6.79713613476307,5.69536342927002,3.1136204275253,3.19219898720825,7.85374586469017,9.96737539980005,5.65955539095552,7.53758384645058,16.2240111295179,12.7741735488114,9.94849549734627,11.3713745293709,10.3926512954998,13.3924702384114,10.3942073291569,11.0123262136375,12.1188839496344,14.2888107384922,11.3566639425958,9.83837024364896,11.1263193216893,12.3647092912894,10.9718160763333,11.8908790126756,10.9680647375768,11.1916740806893,10.822578747763,11.3383574574847,10.0610385080025,10.2597187460759,9.37048385536446,10.661703161497,11.3889617399207,13.5936185678278,10.6400071224119,10.3807683594597,14.0821826016233,13.989392364525,14.2698281151699,12.6773921888496,18.7462565427467,17.8679049486808,12.2889952878823
|phase1_expression=9.12848428497326,59.6747947063307,63.699893514535,37.2030979907401,49.5886772646884,30.7219067598758,39.4805362606438,11.1046058159756,4.78681655315667,6.55380673701582,10.7867319982068,8.29630453551499,12.6688540149092,12.0640155338216,5.66286595086627,7.28910962603373,13.2916756844348,7.88655413395594,5.89592064504677,8.91218268775863,12.9265801029626,9.92909512008853,9.14199261986274,57.437279782833,74.0991977846959,75.2243872990676,52.9837255275662,49.9893259831263,76.3894146214623,54.438508028145,75.3883736228036,13.9706748161119,15.3766196896143,31.6963362030877,14.4425809875637,18.7845149255096,15.1085323634153,25.1118978442145,21.8773896466664,23.0350447348471,28.8233429135197,20.4913645487534,25.24653835762,20.8988717839458,23.0125633868298,24.778811541827,72.7623950243676,45.3492325271329,42.3994332677531,39.8581293102281,34.2966732982138,47.4383462404406,7.21465206048266,13.7818806982155,8.06625117941913,40.9042503297156,33.5244124728345,36.097046459421,11.1274053472779,9.52183762689659,8.23980824558033,47.4382344896785,52.4683929705572,63.8928799269793,73.1761108299561,77.4423325291249,49.7336183460552,43.0324501960141,8.50254820929517,7.83034442323806,8.62332341540666,15.996455126613,14.7981922437581,8.94182834269164,8.91362880469598,17.4651569455904,13.2139057199266,7.02280359468532,7.98753972932466,8.5726087024626,7.77644970620482,5.2091337055676,11.1673199600552,5.06486349028512,9.77908785771585,8.83885756421003,10.1083893367363,9.69277118291563,21.2790603266247,20.782179029366,25.7979394944493,26.673140186423,24.478968013479,34.5410042648203,32.4888208723835,34.4980703064948,12.9208866521212,25.2236877415525,39.2276866950332,34.9806178765237,15.2110893358815,23.0987659345772,10.1922095882658,28.4426681261332,22.7315593061775,22.2956681618087,24.7706978057244,17.9268691158924,3.10725460376606,8.16431764856536,14.7462527751215,17.354532263792,15.681853813412,18.9910527096304,17.8734834846271,12.6923257242972,20.2699873542187,12.5801440520323,11.4999371753484,12.2942805960031,8.83366073841574,11.1521308221101,59.6453635897991,5.5628351432194,11.1006754611131,44.1940705510863,5.39168060276641,5.39912457894067,6.98886248901856,7.78911324905078,2.74500361691176,9.5497307605777,4.69325664519146,7.41574826257959,8.51930982694196,9.89671704713322,11.4060087512354,12.9383249434497,13.8997517138521,17.2562321826909,6.50602214813519,5.74755261083682,6.66229880279792,6.93242162044289,6.87168641428411,4.86832137082429,9.93238280333126,10.8655415710387,5.6047678162539,5.67318240503458,7.03804496655795,10.0830036916684,6.67313398141435,11.8405736617537,10.2891068203972,8.95654200683219,6.31991868581911,7.97778512055617,6.81992398549422,10.5634143993106,10.3191466391682,12.7844063637321,10.180023630164,12.0026181365916,11.8785676923281,12.3242990717716,15.5598572811779,15.4130251924664,12.5065485934245,13.1333971263276,12.8088719082452,11.5497990066013,13.3925570327541,13.4206418760372,7.14985825118033,8.95270127699774,61.7883124179702,35.4363759329149,9.59797127408553,6.0381534683714,11.3403365963442,20.5717195115809,26.4629872175396,32.3383564391351,34.1660924312048,38.3748564506945,35.9409348584385,30.6392966943372,25.1503672383665,32.357498711552,40.4178153265678,36.0445704590405,10.8110703543257,9.36837803399776,11.270773567308,10.386217720111,10.4734343070518,14.1674356178443,11.4458132194906,16.0895061297766,14.9148791449306,16.0416313098341,29.0523574545406,8.67594549723689,11.0073037263394,9.89393294493356,9.33156558387113,9.64708639009667,11.4581633301639,14.6725030099913,16.3756579042786,18.3956146836015,25.8782771749238,23.4448797031157,24.9630138491648,23.2372567711343,21.8864844496733,37.6305946663426,19.2143317773269,8.7166049414423,11.2445833744998,9.16623463186016,9.62230017982859,15.7455881995307,18.5674039891091,18.3425628986331,13.24135210492,15.0595988961167,14.5103839478313,17.0417847304368,17.9592381140531,22.9992003144603,52.7769493787453,45.6880774407716,13.277635371514,15.1765210467603,9.15138362930414,10.4318401067061,19.180388609071,8.33154059774431,13.566853434899,15.2271110275689,12.2791336707695,13.860190281248,15.5959071857676,15.8522857241746,19.02610297872,19.8733983379692,18.5785255634866,6.10510501201433,13.0584878391607,11.5742642383716,12.8680697889325,14.0224604526655,11.9470624505967,10.4395673546642,12.9999129494843,13.013750503157,15.3556984298002,15.0643222492524,18.6068371081119,11.9966130727577,9.26893183800275,15.8018378967908,17.9211634577498,9.28219889233682,6.12791290356818,7.56256594931503,8.5376731296618,9.85950361145325,10.1083933176096,9.27517851530767,13.1639216481697,19.790221692449,27.2219181353904,29.8683219917986,18.9654422327267,14.5099902588502,12.9171541356724,11.0372652618525,17.1896175364517,20.0251897688975,39.3499129450298,5.7481843623258,9.56876932467975,13.2087595496462,7.9633646768976,6.78126445216888,5.74115756428306,7.32090154260872,6.4591803397665,7.41742697315387,4.83699908315483,34.3681422485441,10.4390877881775,8.3360981522008,12.3126088536853,11.7089445768102,16.1588297172171,14.4304850631758,15.4561962206378,21.7257431846745,51.7163743434254,16.1548221402601,1.69107881605257,15.1011711504419,12.2439282938252,13.8060343724274,14.4659002295059,10.8131920314098,14.4349403534277,10.8069639420479,12.687980675511,7.48910774560619,10.657110231541,3.47612232690996,10.3389859797984,8.11416561602135,7.01572444080093,7.51912121803422,10.3314304486258,6.85114062263822,6.4983391956814,6.5628192466296,5.79171730577999,5.44461399738939,7.01696741326217,5.58028681513911,6.07759891344159,18.5918914564473,17.7588762699252,22.1593225825405,30.3871155618982,13.3300819882211,27.4016414158726,21.6118916635373,29.368467933832,19.0597399533438,8.471277639256,2.30162618253588,6.30185064783336,9.10821866421544,8.22099023724771,6.7985450765073,4.72515750162264,5.85417564191487,6.79713613476307,5.69536342927002,3.1136204275253,3.19219898720825,7.85374586469017,9.96737539980005,5.65955539095552,7.53758384645058,16.2240111295179,12.7741735488114,9.94849549734627,11.3713745293709,10.3926512954998,13.3924702384114,10.3942073291569,11.0123262136375,12.1188839496344,14.2888107384922,11.3566639425958,9.83837024364896,11.1263193216893,12.3647092912894,10.9718160763333,11.8908790126756,10.9680647375768,11.1916740806893,10.822578747763,11.3383574574847,10.0610385080025,10.2597187460759,9.37048385536446,10.661703161497,11.3889617399207,13.5936185678278,10.6400071224119,10.3807683594597,14.0821826016233,13.989392364525,14.2698281151699,12.6773921888496,18.7462565427467,17.8679049486808,12.2889952878823
|short_description=p1@Aph1a
|short_description=p1@Aph1a
}}
}}

Latest revision as of 23:59, 25 September 2015

Short description:p1@Aph1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Aph1a_5end
Coexpression cluster:MCL_coexpression_mm9:436
Association with transcript: 0bp_to_ENSMUST00000015894_5end
EntrezGene:Aph1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Aph1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I559.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I663.70
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.20
CD326+ enterocyte, pool2.CNhs13197.11849-124I449.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I730.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I839.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D157.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D274.10
GP2+ M cell, pool1.CNhs13228.11845-124H975.22
GP2+ M cell, pool2.CNhs13231.11846-124I152.98
GP2+ M cell, pool3.CNhs13240.11847-124I249.99
Ileum epithelium, pool1.CNhs13199.10252-104B976.39
Ileum epithelium, pool2.CNhs13232.10253-104C154.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C875.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H220.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H425.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.78
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B772.76
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C245.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B842.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C339.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C447.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C140.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C536.10
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C647.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D152.47
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C763.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E773.18
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D277.44
Mouse Microglia, donor1.CNhs12629.11718-123C849.73
Mouse Microglia, donor2.CNhs12634.11736-123E843.03
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.91
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D921.28
Mouse Schwann, donor2.CNhs12573.11746-123F920.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F432.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.50
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E339.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I834.98
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.93
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I115.68
adrenal gland, embryo E18.CNhs11026.1262-18F518.99
adrenal gland, neonate N00.CNhs11191.1311-23C117.87
adrenal gland, neonate N25.CNhs11223.1377-27I312.69
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H112.58
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A68.83
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H459.65
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H744.19
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.94
epididymis, adult.CNhs10490.58-23B213.90
eyeball, adult.CNhs10484.31-12G417.26
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C66.87
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G89.93
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I68.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E910.56
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I912.78
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C812.00
heart, embryo E16.CNhs11021.457-17C611.88
heart, embryo E17.CNhs11025.479-18E512.32
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E315.41
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G113.13
heart, neonate N16.CNhs11209.782-15G112.81
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D313.39
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G18.95
intestinal mucosa, adult.CNhs10506.860-29I361.79
intestine, adult.CNhs10496.178-9A335.44
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D811.34
intestine, embryo E16.CNhs10585.463-22H420.57
intestine, embryo E17.CNhs10582.482-18D326.46
intestine, embryo E18.CNhs10526.1289-20F732.34
intestine, neonate N00.CNhs11126.644-26D134.17
intestine, neonate N01.CNhs11192.1322-23E938.37
intestine, neonate N06.CNhs11102.688-20B835.94
intestine, neonate N07.CNhs11095.720-20F230.64
intestine, neonate N10.CNhs11098.755-23A525.15
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E340.42
intestine, neonate N30.CNhs11131.1384-42G136.04
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F89.37
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C710.47
kidney, neonate N00.CNhs11214.646-21G714.17
kidney, neonate N10.CNhs11206.758-6D511.45
kidney, neonate N20.CNhs11113.832-19I116.09
kidney, neonate N25.CNhs11122.1353-25F314.91
kidney, neonate N30.CNhs11203.1385-42H116.04
liver, adult pregnant day01.CNhs10466.508-5B229.05
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H611.01
liver, embryo E14.CNhs10594.409-16E19.89
liver, embryo E15.CNhs10520.433-16D79.33
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F416.38
liver, neonate N03.CNhs11123.1345-25G218.40
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B924.96
liver, neonate N20.CNhs11220.823-25A323.24
liver, neonate N25.CNhs11198.1368-26H121.89
liver, neonate N30.CNhs11106.1382-42D137.63
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I618.57
lung, neonate N00.CNhs11224.640-42C618.34
lung, neonate N06.CNhs11212.683-20E513.24
lung, neonate N07.CNhs11111.715-19A315.06
lung, neonate N10.CNhs11219.750-23E614.51
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C717.96
lung, neonate N30.CNhs11133.1394-42H223.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A152.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A145.69
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H215.18
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.58
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I713.06
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I412.87
oviduct, adult pregnant day01.CNhs10500.988-6G614.02
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G918.61
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B615.80
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C78.54
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F513.16
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I727.22
placenta, adult pregnant day17.CNhs10464.577-18G329.87
prostate, adult.CNhs10470.859-1F818.97
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H311.04
skin, neonate N06.CNhs11097.693-20I517.19
skin, neonate N10.CNhs11108.762-6C420.03
small intestine, neonate N16.CNhs11114.790-21I139.35
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.84
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E310.44
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D412.31
stomach, embryo E17.CNhs11006.1035-18D511.71
stomach, embryo E18.CNhs10999.1286-20C616.16
stomach, neonate N03.CNhs11193.1340-24B814.43
stomach, neonate N07.CNhs11210.718-18A915.46
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I151.72
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F515.10
testis, embryo E15.CNhs11034.443-27C512.24
testis, embryo E16.CNhs11033.470-26G513.81
testis, embryo E17.CNhs11029.486-18I514.47
testis, embryo E18.CNhs11027.503-18G510.81
testis, neonate N00.CNhs11189.1300-22B714.43
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D912.69
testis, neonate N20.CNhs11110.839-18H37.49
testis, neonate N30.CNhs11130.1391-42E210.66
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I410.34
thymus, embryo E15.CNhs11005.430-45I28.11
thymus, embryo E16.CNhs11002.456-26C57.02
thymus, embryo E17.CNhs10581.478-18C17.52
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D35.79
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A27.02
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B418.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F722.16
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.39
urinary bladder, adult.CNhs10481.879-12E413.33
uterus, adult pregnant day19.CNhs10497.590-15F527.40
uterus, adult.CNhs10509.92-27E521.61
vagina, adult.CNhs10502.89-27D529.37
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F27.54
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.38
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I513.99
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C618.75
whole body, neonate N06.CNhs10515.692-21D117.87
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.44e-0825
endodermal cell3.55e-0720

Uber anatomy
Ontology termp-valuen
intestine3.64e-1131
mucosa2.90e-0815
gastrointestinal system1.76e-0747
intestinal mucosa5.34e-0713
wall of intestine5.34e-0713
gastrointestinal system mucosa5.34e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:95697876..95697897,%2B&oldid=4221809"