FFCP PHASE1:Mm9::chr2:157172383..157172399,-: Difference between revisions
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{{FFCP|EntrezGene=14601|HGNC=|MCL_coexpression_id=31|UniProt=P16043,Q544X5|association_with_transcript=0bp_to_ENSMUST00000029172,NM_010285,uc008noy.1_5end|description=CAGE_peak_1_at_Ghrh_5end|id=chr2:157172383..157172399,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!3.65e-09!6;UBERON:0005631!1.55e-08!3;UBERON:0000478!1.55e-08!3;UBERON:0000158!1.55e-08!3;UBERON:0007811!5.18e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0005795,3.40e-49,4;UBERON:0000995,3.40e-49,4;UBERON:0001987,2.75e-44,2;UBERON:0003124,2.75e-44,2;UBERON:0004340,2.75e-44,2;UBERON:0003975,1.33e-39,5;UBERON:0003134,3.49e-25,8;UBERON:0000305,5.07e-23,1;UBERON:0006834,1.39e-22,1;UBERON:0004175,1.66e-22,9;UBERON:0000474,1.66e-22,9;UBERON:0003100,1.32e-18,11;UBERON:0004923,4.35e-09,24;UBERON:0003133,4.94e-09,24;UBERON:0004871,1.34e-08,3;UBERON:0005156,2.11e-08,26;UBERON:0000990,2.11e-08,26;UBERON:0007023,1.20e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.768032666281217,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.732829672656,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0.608929898229199,116.3971671996,1368.01151363855,0,0.16488625294148,0,0,0,0,0,0,0,0,0.740778109478847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0.671538465456314,0,3.19060208267009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p1@Ghrh}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14601 | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=P16043,Q544X5 | |||
|association_with_transcript=0bp_to_ENSMUST00000029172,NM_010285,uc008noy.1_5end | |||
|cluster_id=chr2:157172383..157172399,- | |||
|description=CAGE_peak_1_at_Ghrh_5end | |||
|id=chr2:157172383..157172399,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!3.65e-09!6;UBERON:0005631!1.55e-08!3;UBERON:0000478!1.55e-08!3;UBERON:0000158!1.55e-08!3;UBERON:0007811!5.18e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0005795,3.40e-49,4;UBERON:0000995,3.40e-49,4;UBERON:0001987,2.75e-44,2;UBERON:0003124,2.75e-44,2;UBERON:0004340,2.75e-44,2;UBERON:0003975,1.33e-39,5;UBERON:0003134,3.49e-25,8;UBERON:0000305,5.07e-23,1;UBERON:0006834,1.39e-22,1;UBERON:0004175,1.66e-22,9;UBERON:0000474,1.66e-22,9;UBERON:0003100,1.32e-18,11;UBERON:0004923,4.35e-09,24;UBERON:0003133,4.94e-09,24;UBERON:0004871,1.34e-08,3;UBERON:0005156,2.11e-08,26;UBERON:0000990,2.11e-08,26;UBERON:0007023,1.20e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.768032666281217,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.732829672656,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0.608929898229199,116.3971671996,1368.01151363855,0,0.16488625294148,0,0,0,0,0,0,0,0,0.740778109478847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0.671538465456314,0,3.19060208267009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p1@Ghrh | |||
}} |
Latest revision as of 00:38, 26 September 2015
Short description: | p1@Ghrh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ghrh_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 0bp_to_ENSMUST00000029172, NM_010285, uc008noy.1_5end |
EntrezGene: | Ghrh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.33e-65 | 3 |
extraembryonic structure | 1.33e-65 | 3 |
membranous layer | 1.33e-65 | 3 |
embryonic uterus | 3.40e-49 | 4 |
uterus | 3.40e-49 | 4 |
placenta | 2.75e-44 | 2 |
chorion | 2.75e-44 | 2 |
allantois | 2.75e-44 | 2 |
internal female genitalia | 1.33e-39 | 5 |
female reproductive organ | 3.49e-25 | 8 |
amnion | 5.07e-23 | 1 |
uterus or analog | 1.39e-22 | 1 |
internal genitalia | 1.66e-22 | 9 |
female reproductive system | 1.66e-22 | 9 |
female organism | 1.32e-18 | 11 |
organ component layer | 4.35e-09 | 24 |
reproductive organ | 4.94e-09 | 24 |
somatic layer of lateral plate mesoderm | 1.34e-08 | 3 |
reproductive structure | 2.11e-08 | 26 |
reproductive system | 2.11e-08 | 26 |
adult organism | 1.20e-07 | 51 |