FFCP PHASE1:Mm9::chr11:96164868..96164875,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:96164868..96164875,+ to FFCP PHASE1:Mm9::chr11:96164868..96164875,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15413 | |EntrezGene=15413 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=A2AA01,P09079 | |UniProt=A2AA01,P09079 | ||
|association_with_transcript=42bp_to_NM_008268,uc007lbu.2_5end | |||
|cluster_id=chr11:96164868..96164875,+ | |||
|description=CAGE_peak_5_at_Hoxb5_5end | |||
|id=chr11:96164868..96164875,+ | |||
|ontology_enrichment_celltype=CL:0000107!3.78e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.11e-50,9;CL:0000540,6.41e-14,33;CL:0000047,6.41e-14,33;CL:0000031,6.41e-14,33;CL:0000404,6.41e-14,33;CL:0000393,8.16e-12,39;CL:0000211,8.16e-12,39;CL:0002319,9.82e-11,43;CL:0000221,1.70e-10,44;CL:0000133,1.70e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!4.08e-09!27;UBERON:0002410!3.78e-08!9;UBERON:0002005!3.41e-07!3;UBERON:0005428!3.41e-07!3;UBERON:0000013!3.57e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.11e-50,9;UBERON:0000010,5.06e-41,11;UBERON:0010313,3.73e-38,3;UBERON:0002342,3.73e-38,3;UBERON:0002005,3.73e-38,3;UBERON:0005428,3.73e-38,3;UBERON:0005062,3.73e-38,3;UBERON:0000013,4.98e-38,3;UBERON:0005157,1.86e-10,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,1.14075483509418,0.509235257325564,0.234690248288502,0,0,0,0.630540576424764,0.8858587585951,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,2.2085575359138,2.73307121007647,4.73931475012158,0,0,0,1.21443210502468,3.79932615284705,2.76701444562566,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,1.14075483509418,0.509235257325564,0.234690248288502,0,0,0,0.630540576424764,0.8858587585951,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,2.2085575359138,2.73307121007647,4.73931475012158,0,0,0,1.21443210502468,3.79932615284705,2.76701444562566,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Hoxb5 | |||
}} | }} |
Latest revision as of 01:26, 26 September 2015
Short description: | p5@Hoxb5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hoxb5_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 42bp_to_NM_008268, uc007lbu.2_5end |
EntrezGene: | Hoxb5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.11e-50 | 9 |
neuron | 6.41e-14 | 33 |
neuronal stem cell | 6.41e-14 | 33 |
neuroblast | 6.41e-14 | 33 |
electrically signaling cell | 6.41e-14 | 33 |
electrically responsive cell | 8.16e-12 | 39 |
electrically active cell | 8.16e-12 | 39 |
neural cell | 9.82e-11 | 43 |
ectodermal cell | 1.70e-10 | 44 |
neurectodermal cell | 1.70e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.11e-50 | 9 |
peripheral nervous system | 5.06e-41 | 11 |
neural crest-derived structure | 3.73e-38 | 3 |
neural crest | 3.73e-38 | 3 |
enteric nervous system | 3.73e-38 | 3 |
vagal neural crest | 3.73e-38 | 3 |
neural fold | 3.73e-38 | 3 |
sympathetic nervous system | 4.98e-38 | 3 |
epithelial fold | 1.86e-10 | 20 |