FFCP PHASE1:Mm9::chr17:25073875..25073912,-: Difference between revisions
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{{FFCP|EntrezGene=30957|HGNC=|MCL_coexpression_id=1|UniProt=Q9ESN9,E9Q6B6|association_with_transcript=0bp_to_ENSMUST00000088345,ENSMUST00000119115,ENSMUST00000120035,ENSMUST00000121787,ENSMUST00000146923,ENSMUST00000148360_5end|description=CAGE_peak_1_at_Mapk8ip3_5end|id=chr17:25073875..25073912,-|ontology_enrichment_celltype=CL:0000117!8.23e-12!23;CL:0000337!8.23e-12!23;CL:0000540!8.74e-11!33;CL:0000047!8.74e-11!33;CL:0000031!8.74e-11!33;CL:0000404!8.74e-11!33;CL:0002319!3.95e-10!43;CL:0000221!1.13e-09!44;CL:0000133!1.13e-09!44;CL:0000393!5.87e-08!39;CL:0000211!5.87e-08!39;CL:0000055!3.50e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-12,23;CL:0000337,8.23e-12,23;CL:0000540,8.74e-11,33;CL:0000047,8.74e-11,33;CL:0000031,8.74e-11,33;CL:0000404,8.74e-11,33;CL:0002319,3.95e-10,43;CL:0000221,1.13e-09,44;CL:0000133,1.13e-09,44;CL:0000393,5.87e-08,39;CL:0000211,5.87e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.07e-27!73;UBERON:0005743!2.07e-27!73;UBERON:0000073!7.39e-26!75;UBERON:0001016!7.39e-26!75;UBERON:0001049!3.96e-23!52;UBERON:0005068!3.96e-23!52;UBERON:0006241!3.96e-23!52;UBERON:0007135!3.96e-23!52;UBERON:0002346!6.05e-23!71;UBERON:0003075!6.05e-23!71;UBERON:0007284!6.05e-23!71;UBERON:0000955!1.99e-22!50;UBERON:0006238!1.99e-22!50;UBERON:0004121!3.67e-22!102;UBERON:0000924!3.67e-22!102;UBERON:0006601!3.67e-22!102;UBERON:0002616!8.29e-22!49;UBERON:0000033!4.67e-19!63;UBERON:0002020!2.24e-18!34;UBERON:0003080!4.85e-18!40;UBERON:0002780!2.33e-17!39;UBERON:0001890!2.33e-17!39;UBERON:0006240!2.33e-17!39;UBERON:0007811!4.17e-17!86;UBERON:0003056!5.76e-17!49;UBERON:0000153!3.13e-16!94;UBERON:0002791!9.63e-16!29;UBERON:0003528!9.63e-16!29;UBERON:0001893!9.63e-16!29;UBERON:0000956!2.29e-11!21;UBERON:0001869!2.29e-11!21;UBERON:0000203!2.29e-11!21;UBERON:0002619!5.23e-10!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.07e-27,73;UBERON:0001016,7.39e-26,75;UBERON:0000073,1.19e-24,54;UBERON:0001049,3.96e-23,52;UBERON:0005068,3.96e-23,52;UBERON:0006241,3.96e-23,52;UBERON:0007135,3.96e-23,52;UBERON:0002346,6.52e-22,64;UBERON:0003075,6.52e-22,64;UBERON:0007284,6.52e-22,64;UBERON:0004121,8.99e-21,95;UBERON:0000924,8.99e-21,95;UBERON:0006601,8.99e-21,95;UBERON:0000955,2.74e-20,47;UBERON:0006238,2.74e-20,47;UBERON:0002616,1.10e-19,46;UBERON:0010314,8.20e-19,92;UBERON:0002020,2.24e-18,34;UBERON:0003080,4.85e-18,40;UBERON:0010371,8.27e-18,73;UBERON:0002780,2.33e-17,39;UBERON:0001890,2.33e-17,39;UBERON:0006240,2.33e-17,39;UBERON:0003056,5.76e-17,49;UBERON:0003528,9.63e-16,29;UBERON:0002791,9.63e-16,29;UBERON:0001893,9.63e-16,29;UBERON:0000956,2.29e-11,21;UBERON:0001869,2.29e-11,21;UBERON:0000203,2.29e-11,21;UBERON:0002619,5.23e-10,17;UBERON:0002021,9.30e-08,10;UBERON:0000411,9.30e-08,10;UBERON:0001950,9.30e-08,10|phase1_expression=26.1042620780814,24.0793031271159,18.654968814971,36.2957053568196,30.0537437967808,16.1164101035414,14.2503710763271,44.0310532935775,50.6839399746,60.6227123173963,27.9085288207573,21.3789386107502,45.1969927018383,44.0598828191747,45.3029276069301,45.1519846279312,49.6688933470984,33.2812584452941,34.2786084014347,45.4096927423892,38.5246104384346,15.588679338539,18.2839852397255,14.0793332058198,13.3057383018959,13.7815671387605,11.630573896295,14.2211013572687,10.6413114895569,9.57714493087737,10.8647950221099,35.5617177137393,31.3683041668131,15.8481681015439,15.0202842270663,5.98444723290572,11.2293145944303,25.1118978442145,21.8773896466664,27.2232346866375,35.8821207698919,32.1031377930469,26.2175590636823,25.305260413091,24.7359712175616,22.3927037637251,17.9950009200049,36.4102011155346,31.8544964964984,50.746203658388,31.9169041305827,47.4383462404406,32.8853907873163,52.9514363668281,48.3975070765148,17.2363822144084,21.203474555468,19.5955395065428,49.9721658323206,48.667170093027,39.2975470173831,21.3472055203553,24.9002542911119,10.7987966073768,13.8441290759376,9.2362414942993,30.8588113833957,39.9587037534417,38.7799150033706,48.0621140460819,37.6481680818974,69.9844911789319,73.1074870549841,38.0946385558507,50.0313358715194,48.7185956903311,148.656439349175,158.970735916059,168.967186581868,54.0733779693795,59.192505410759,48.4449434617787,163.601237414809,106.362133295988,117.196256044813,64.2290316332596,62.7859112324044,49.3958531437047,16.6597625333005,22.3691817916085,37.1026545538148,12.0459342777394,17.6792546764015,12.4131734076698,18.1937396885347,21.0572636935748,16.8533304158102,16.0204503223374,15.846946280775,22.9670723431721,21.2673563862788,20.5322363862909,50.9610479413291,42.6640021891999,7.57718643539249,5.57391704045217,5.56076889516262,17.0133980781399,33.6619248741323,42.8997781897344,24.4614310740252,45.0608907901969,35.514786577433,43.2573978386027,39.5098055975968,24.1279855352977,30.1577860635936,29.0644707409022,30.0767587662957,21.1914573431106,30.0344465106135,33.4563924663303,29.8226817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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30957 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ESN9,E9Q6B6 | |||
|association_with_transcript=0bp_to_ENSMUST00000088345,ENSMUST00000119115,ENSMUST00000120035,ENSMUST00000121787,ENSMUST00000146923,ENSMUST00000148360_5end | |||
|cluster_id=chr17:25073875..25073912,- | |||
|description=CAGE_peak_1_at_Mapk8ip3_5end | |||
|id=chr17:25073875..25073912,- | |||
|ontology_enrichment_celltype=CL:0000117!8.23e-12!23;CL:0000337!8.23e-12!23;CL:0000540!8.74e-11!33;CL:0000047!8.74e-11!33;CL:0000031!8.74e-11!33;CL:0000404!8.74e-11!33;CL:0002319!3.95e-10!43;CL:0000221!1.13e-09!44;CL:0000133!1.13e-09!44;CL:0000393!5.87e-08!39;CL:0000211!5.87e-08!39;CL:0000055!3.50e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-12,23;CL:0000337,8.23e-12,23;CL:0000540,8.74e-11,33;CL:0000047,8.74e-11,33;CL:0000031,8.74e-11,33;CL:0000404,8.74e-11,33;CL:0002319,3.95e-10,43;CL:0000221,1.13e-09,44;CL:0000133,1.13e-09,44;CL:0000393,5.87e-08,39;CL:0000211,5.87e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-27!73;UBERON:0005743!2.07e-27!73;UBERON:0000073!7.39e-26!75;UBERON:0001016!7.39e-26!75;UBERON:0001049!3.96e-23!52;UBERON:0005068!3.96e-23!52;UBERON:0006241!3.96e-23!52;UBERON:0007135!3.96e-23!52;UBERON:0002346!6.05e-23!71;UBERON:0003075!6.05e-23!71;UBERON:0007284!6.05e-23!71;UBERON:0000955!1.99e-22!50;UBERON:0006238!1.99e-22!50;UBERON:0004121!3.67e-22!102;UBERON:0000924!3.67e-22!102;UBERON:0006601!3.67e-22!102;UBERON:0002616!8.29e-22!49;UBERON:0000033!4.67e-19!63;UBERON:0002020!2.24e-18!34;UBERON:0003080!4.85e-18!40;UBERON:0002780!2.33e-17!39;UBERON:0001890!2.33e-17!39;UBERON:0006240!2.33e-17!39;UBERON:0007811!4.17e-17!86;UBERON:0003056!5.76e-17!49;UBERON:0000153!3.13e-16!94;UBERON:0002791!9.63e-16!29;UBERON:0003528!9.63e-16!29;UBERON:0001893!9.63e-16!29;UBERON:0000956!2.29e-11!21;UBERON:0001869!2.29e-11!21;UBERON:0000203!2.29e-11!21;UBERON:0002619!5.23e-10!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.07e-27,73;UBERON:0001016,7.39e-26,75;UBERON:0000073,1.19e-24,54;UBERON:0001049,3.96e-23,52;UBERON:0005068,3.96e-23,52;UBERON:0006241,3.96e-23,52;UBERON:0007135,3.96e-23,52;UBERON:0002346,6.52e-22,64;UBERON:0003075,6.52e-22,64;UBERON:0007284,6.52e-22,64;UBERON:0004121,8.99e-21,95;UBERON:0000924,8.99e-21,95;UBERON:0006601,8.99e-21,95;UBERON:0000955,2.74e-20,47;UBERON:0006238,2.74e-20,47;UBERON:0002616,1.10e-19,46;UBERON:0010314,8.20e-19,92;UBERON:0002020,2.24e-18,34;UBERON:0003080,4.85e-18,40;UBERON:0010371,8.27e-18,73;UBERON:0002780,2.33e-17,39;UBERON:0001890,2.33e-17,39;UBERON:0006240,2.33e-17,39;UBERON:0003056,5.76e-17,49;UBERON:0003528,9.63e-16,29;UBERON:0002791,9.63e-16,29;UBERON:0001893,9.63e-16,29;UBERON:0000956,2.29e-11,21;UBERON:0001869,2.29e-11,21;UBERON:0000203,2.29e-11,21;UBERON:0002619,5.23e-10,17;UBERON:0002021,9.30e-08,10;UBERON:0000411,9.30e-08,10;UBERON:0001950,9.30e-08,10 | |||
|phase1_expression=26.1042620780814,24.0793031271159,18.654968814971,36.2957053568196,30.0537437967808,16.1164101035414,14.2503710763271,44.0310532935775,50.6839399746,60.6227123173963,27.9085288207573,21.3789386107502,45.1969927018383,44.0598828191747,45.3029276069301,45.1519846279312,49.6688933470984,33.2812584452941,34.2786084014347,45.4096927423892,38.5246104384346,15.588679338539,18.2839852397255,14.0793332058198,13.3057383018959,13.7815671387605,11.630573896295,14.2211013572687,10.6413114895569,9.57714493087737,10.8647950221099,35.5617177137393,31.3683041668131,15.8481681015439,15.0202842270663,5.98444723290572,11.2293145944303,25.1118978442145,21.8773896466664,27.2232346866375,35.8821207698919,32.1031377930469,26.2175590636823,25.305260413091,24.7359712175616,22.3927037637251,17.9950009200049,36.4102011155346,31.8544964964984,50.746203658388,31.9169041305827,47.4383462404406,32.8853907873163,52.9514363668281,48.3975070765148,17.2363822144084,21.203474555468,19.5955395065428,49.9721658323206,48.667170093027,39.2975470173831,21.3472055203553,24.9002542911119,10.7987966073768,13.8441290759376,9.2362414942993,30.8588113833957,39.9587037534417,38.7799150033706,48.0621140460819,37.6481680818974,69.9844911789319,73.1074870549841,38.0946385558507,50.0313358715194,48.7185956903311,148.656439349175,158.970735916059,168.967186581868,54.0733779693795,59.192505410759,48.4449434617787,163.601237414809,106.362133295988,117.196256044813,64.2290316332596,62.7859112324044,49.3958531437047,16.6597625333005,22.3691817916085,37.1026545538148,12.0459342777394,17.6792546764015,12.4131734076698,18.1937396885347,21.0572636935748,16.8533304158102,16.0204503223374,15.846946280775,22.9670723431721,21.2673563862788,20.5322363862909,50.9610479413291,42.6640021891999,7.57718643539249,5.57391704045217,5.56076889516262,17.0133980781399,33.6619248741323,42.8997781897344,24.4614310740252,45.0608907901969,35.514786577433,43.2573978386027,39.5098055975968,24.1279855352977,30.1577860635936,29.0644707409022,30.0767587662957,21.1914573431106,30.0344465106135,33.4563924663303,29.8226817948995,104.522744533122,101.372206097712,21.2029355823131,15.5759661857696,7.19883277192089,13.5965142968179,157.729543293278,140.452685065318,71.6229807043327,135.93061839036,161.100738118108,151.26969643936,139.527486238272,19.7568365869614,23.7617313865278,16.9324248150562,22.3068367239662,27.0650521362424,24.1397209655147,29.1700650284666,36.3198610984073,32.3853735960321,34.4625907566246,27.3609035714408,45.5317932500668,15.3053274982318,24.9620025821521,29.2078866112155,27.3994665534469,40.5948983869373,27.163668988729,22.6360350048738,21.2966665495788,14.0442637462647,10.5512641917033,12.2190304740105,23.1980865239762,24.390710238034,19.4467026377896,26.988899856714,25.5793501271625,24.3742038362058,33.7174219888091,33.5341751749524,22.6524764192309,31.4309313334748,30.3709808546326,38.5076845342815,39.9125965671157,46.9837246722848,39.4566871155493,136.478176618119,54.6423491734,25.7726650727362,15.6025834331491,21.1155368029882,24.384850545346,21.6497335021117,18.9582513145942,15.7888411129858,17.1203063501303,21.353807769503,10.5407331023367,18.8501406600202,17.3092130675801,21.6410136702223,20.6728463990471,20.9653908378453,22.1046813312348,13.0870851657626,19.7649926814831,14.6520056375005,21.1797380959127,23.0803459729475,19.7081653891795,20.7415841767564,27.1602672282468,20.5668333472201,20.2371348831753,16.6013471168803,20.6887931087957,26.142346350056,20.4624522270217,32.8633396649375,29.1824363300424,22.9163266603278,29.0573098825319,15.8892522239535,18.1210532704134,18.6898668485561,12.6527922207291,14.3537329632698,14.9021537988796,10.225652570749,15.4381926836277,24.9416806724916,18.1911755299665,20.0446921023692,18.6719594352707,19.2446003596572,22.2783322397615,22.6141458841713,26.147908812945,25.5368933452029,22.1464689648775,22.1642128433907,33.4281162020105,23.8305274974936,29.3637588920468,21.1107797514981,17.4049818821987,14.7529281905711,27.3177378841685,148.188194558732,155.071061361485,9.01642199571715,14.6433137778536,26.5026904309656,28.111589589358,35.9757074213774,29.6321309461165,25.8446461935577,32.5538010407157,31.1704240289669,35.0707029493574,38.7382022387593,106.999998368462,26.5427959339462,29.0246933977626,21.3381916753185,25.570369060743,42.4784442687881,17.7229864393136,18.1394134178851,27.9135518038729,20.6711325016541,29.2063390546731,27.3933990758314,25.0838273339479,22.8158322166222,36.9763006784905,27.4088382294997,30.9406629744561,47.3211051997765,31.5106914554793,27.5533996457267,21.2193664681276,35.8227271957393,39.7762463252617,38.9981178827027,55.4126207388571,20.8857820176702,38.5534368972153,26.0223509704855,32.3177055765301,22.7664841641227,18.576380877872,19.3383197285081,24.7852758615042,22.4440244204985,145.929712682271,28.1936953316457,22.9089423439177,20.1862034832986,49.352535735229,43.8788470984491,45.2980782948915,24.4768939191152,23.9316983473455,21.0063960182724,14.3200592702267,20.72000757956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| |||
|short_description=p1@Mapk8ip3 | |||
}} |
Latest revision as of 02:05, 26 September 2015
Short description: | p1@Mapk8ip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mapk8ip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000088345, ENSMUST00000119115, ENSMUST00000120035, ENSMUST00000121787, ENSMUST00000146923, ENSMUST00000148360_5end |
EntrezGene: | Mapk8ip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.23e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.23e-12 | 23 |
neuron | 8.74e-11 | 33 |
neuronal stem cell | 8.74e-11 | 33 |
neuroblast | 8.74e-11 | 33 |
electrically signaling cell | 8.74e-11 | 33 |
neural cell | 3.95e-10 | 43 |
ectodermal cell | 1.13e-09 | 44 |
neurectodermal cell | 1.13e-09 | 44 |
electrically responsive cell | 5.87e-08 | 39 |
electrically active cell | 5.87e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.07e-27 | 73 |
nervous system | 7.39e-26 | 75 |
regional part of nervous system | 1.19e-24 | 54 |
neural tube | 3.96e-23 | 52 |
neural rod | 3.96e-23 | 52 |
future spinal cord | 3.96e-23 | 52 |
neural keel | 3.96e-23 | 52 |
neurectoderm | 6.52e-22 | 64 |
neural plate | 6.52e-22 | 64 |
presumptive neural plate | 6.52e-22 | 64 |
ectoderm-derived structure | 8.99e-21 | 95 |
ectoderm | 8.99e-21 | 95 |
presumptive ectoderm | 8.99e-21 | 95 |
brain | 2.74e-20 | 47 |
future brain | 2.74e-20 | 47 |
regional part of brain | 1.10e-19 | 46 |
structure with developmental contribution from neural crest | 8.20e-19 | 92 |
gray matter | 2.24e-18 | 34 |
anterior neural tube | 4.85e-18 | 40 |
ecto-epithelium | 8.27e-18 | 73 |
regional part of forebrain | 2.33e-17 | 39 |
forebrain | 2.33e-17 | 39 |
future forebrain | 2.33e-17 | 39 |
pre-chordal neural plate | 5.76e-17 | 49 |
brain grey matter | 9.63e-16 | 29 |
regional part of telencephalon | 9.63e-16 | 29 |
telencephalon | 9.63e-16 | 29 |
cerebral cortex | 2.29e-11 | 21 |
cerebral hemisphere | 2.29e-11 | 21 |
pallium | 2.29e-11 | 21 |
regional part of cerebral cortex | 5.23e-10 | 17 |
occipital lobe | 9.30e-08 | 10 |
visual cortex | 9.30e-08 | 10 |
neocortex | 9.30e-08 | 10 |