Personal tools

FFCP PHASE1:Mm9::chr7:148286454..148286486,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=24058
|EntrezGene=24058
|HGNC=
|HGNC=
|MCL_coexpression_id=297
|TSSclassifier=NA
|UniProt=Q9JLZ8,Q3UKS3
|UniProt=Q9JLZ8,Q3UKS3
|association_with_transcript=-9bp_to_ENSMUST00000097958,NM_023059,uc009kjk.1,uc009kjl.1,uc009kjm.1_5end
|association_with_transcript=-9bp_to_ENSMUST00000097958,NM_023059,uc009kjk.1,uc009kjl.1,uc009kjm.1_5end
|cluster_id=chr7:148286454..148286486,-
|description=CAGE_peak_2_at_Sigirr_5end
|description=CAGE_peak_2_at_Sigirr_5end
|id=chr7:148286454..148286486,-
|id=chr7:148286454..148286486,-
|ontology_enrichment_celltype=CL:0000066!7.67e-07!25;CL:0002563!9.42e-07!9;CL:0002251!9.42e-07!9
|ontology_enrichment_celltype=CL:0000066!7.67e-07!25;CL:0002563!9.42e-07!9;CL:0002251!9.42e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,2.72e-08,9;CL:0002251,2.72e-08,9;CL:0000066,2.83e-08,25;CL:0000223,1.54e-07,20;CL:0002076,3.14e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!4.38e-24!59;UBERON:0004119!5.95e-24!130;UBERON:0000925!5.95e-24!130;UBERON:0006595!5.95e-24!130;UBERON:0000160!7.72e-24!43;UBERON:0001007!4.35e-23!128;UBERON:0001555!4.35e-23!128;UBERON:0007026!4.35e-23!128;UBERON:0004921!9.98e-22!126;UBERON:0004185!9.98e-22!126;UBERON:0000344!6.68e-11!15;UBERON:0001242!1.41e-09!13;UBERON:0000060!1.41e-09!13;UBERON:0001262!1.41e-09!13;UBERON:0004786!1.41e-09!13;UBERON:0004923!8.38e-09!24;UBERON:0002108!1.20e-08!16;UBERON:0005177!1.55e-08!85;UBERON:0000466!1.92e-07!79;UBERON:0000077!1.92e-07!97;UBERON:0001045!9.25e-07!13;UBERON:0003350!9.42e-07!9;UBERON:0004808!9.42e-07!9;UBERON:0001277!9.42e-07!9
|ontology_enrichment_uberon=UBERON:0005409!4.38e-24!59;UBERON:0004119!5.95e-24!130;UBERON:0000925!5.95e-24!130;UBERON:0006595!5.95e-24!130;UBERON:0000160!7.72e-24!43;UBERON:0001007!4.35e-23!128;UBERON:0001555!4.35e-23!128;UBERON:0007026!4.35e-23!128;UBERON:0004921!9.98e-22!126;UBERON:0004185!9.98e-22!126;UBERON:0000344!6.68e-11!15;UBERON:0001242!1.41e-09!13;UBERON:0000060!1.41e-09!13;UBERON:0001262!1.41e-09!13;UBERON:0004786!1.41e-09!13;UBERON:0004923!8.38e-09!24;UBERON:0002108!1.20e-08!16;UBERON:0005177!1.55e-08!85;UBERON:0000466!1.92e-07!79;UBERON:0000077!1.92e-07!97;UBERON:0001045!9.25e-07!13;UBERON:0003350!9.42e-07!9;UBERON:0004808!9.42e-07!9;UBERON:0001277!9.42e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.45e-23,31;UBERON:0005409,2.66e-20,47;UBERON:0004119,3.49e-17,118;UBERON:0000925,3.49e-17,118;UBERON:0006595,3.49e-17,118;UBERON:0001007,2.54e-16,116;UBERON:0001555,2.54e-16,116;UBERON:0007026,2.54e-16,116;UBERON:0004921,5.48e-15,114;UBERON:0000344,1.18e-13,15;UBERON:0001242,6.07e-12,13;UBERON:0001262,6.07e-12,13;UBERON:0004786,6.07e-12,13;UBERON:0004923,1.88e-09,24;UBERON:0005177,2.18e-08,79;UBERON:0003350,2.72e-08,9;UBERON:0004808,2.72e-08,9;UBERON:0001277,2.72e-08,9;UBERON:0001264,1.79e-07,12;UBERON:0007023,7.62e-07,51
|phase1_expression=0,10.4692622291808,13.6499771816861,11.1911758183527,13.5241847085514,8.89760141133016,10.0453435456076,0.129123323441576,0,0,0,0,0.513602189793617,0,0,0,0,0.315462165358238,0.411343300817216,0.42438965179803,1.9559956734746,0,0,8.63959083084396,14.2233754261645,6.31655160526522,11.630573896295,9.9116767035509,13.1116159424898,11.5933859689568,13.082100128663,0,0,0,7.51014211353314,4.82080471539628,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.44932244350839,0,0.679971333707751,3.77792234146472,1.29955283489534,1.34408066129201,1.82577746171277,0,0,0,0.704217098883403,0,0,0,6.27824018932521,7.85415582972806,6.57181778519218,3.31133251185274,0.517875767294343,0,0,0.304465478312141,0.461230994512117,0,0,0.251333182659351,9.64060374164058,0,0,0.161766849947409,0,0,11.1835056730873,0,0,8.17462576667492,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0.712875546952214,1.24406970610093,6.06534620240819,10.3116509384372,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,3.3631438196072,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0.205809224758569,12.5559137533843,12.4291766331866,0.639864751605702,1.62565670302307,2.44848176511977,5.64713868945359,5.55945109612176,10.2721838100782,6.16887780007865,10.3760341476127,10.304743560811,9.15199771389294,8.38345574612217,14.3811105384675,10.1584883441106,6.77080329064848,0,0.342745537829186,1.1270773567308,1.4255592949172,2.13347735884388,1.47285221769669,3.79419222745544,6.6424566590821,6.75094529717912,7.03363834354263,2.07516838961004,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,1.20588579876208,2.03700681425136,1.72617682470486,0.972811360650212,2.19649130550465,1.43768206527355,2.23284568601102,3.12037673114561,2.77836765741823,2.69096120282868,2.8946611281802,4.43407656399851,0,0.325929952884052,0.509235257325564,0.704070744865506,1.67506257441816,1.19021820443007,1.36593553500459,1.7339865851681,0.44292937929755,1.11618338060241,1.14704320301017,3.45369963731791,1.88043776155965,0,0,6.39293554924747,6.89841865761831,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,1.13552068166615,0.35613120733451,0,2.14461159864296,5.30980553359851,1.21390318077491,2.41858845571801,6.22396763194464,6.79194353625777,3.68922177532713,5.94385074286909,6.5436071305951,7.12994756769443,6.32073515871632,4.21674434299995,6.18813259489121,1.70219802876894,0.18006109403131,1.16422815404479,0.428674070063185,0.709360934569094,0.356737635204141,0.658196082408484,1.522324745573,3.05073220482823,2.54198485036584,6.61585194164886,0.32977250588296,0,0.301564624640779,0,0.820704498725306,6.70405924248657,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.138199973804424,9.54670618015114,0.790839983952838,1.01659733563424,2.70013352054503,1.25452977608681,3.9305261474312,1.34864346384821,2.89287095038676,8.89970202745701,9.20266310371729,6.83473244395618,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0.608175645870493,0.410843828659309,0,0,0,0,0.147689527174577,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,2.44184548711471,2.15313255862742,4.19711540910196,2.89784391048286,4.31669693537719,4.2124873581471,1.07184189539533,6.01886524842436,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0,1.11123363900808,1.03017528619447,1.28367683836726,1.76888048234658,2.02783439912192,1.13175804831646,0.468207537349412,0.768301828858431,0.746661096422973,1.90517476513229,1.15884325944855,0.964546102318525,0.824171801606613,0.735994600671987,1.37147700954166,0.177475806159338,0.476872379894642,1.74415699958794,0.941093804153306,1.18460451048347,0.73171189149109,1.05227884575137,0.814824683075171,0.561142271657738,1.18635018124174,0.985044823755635,1.22769312950907,0.464810523557898,0.964533054905707,0,1.40358965067245,0.859484216193193,0,0.220591419119515,0.231867835620421
|phase1_expression=0,10.4692622291808,13.6499771816861,11.1911758183527,13.5241847085514,8.89760141133016,10.0453435456076,0.129123323441576,0,0,0,0,0.513602189793617,0,0,0,0,0.315462165358238,0.411343300817216,0.42438965179803,1.9559956734746,0,0,8.63959083084396,14.2233754261645,6.31655160526522,11.630573896295,9.9116767035509,13.1116159424898,11.5933859689568,13.082100128663,0,0,0,7.51014211353314,4.82080471539628,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.44932244350839,0,0.679971333707751,3.77792234146472,1.29955283489534,1.34408066129201,1.82577746171277,0,0,0,0.704217098883403,0,0,0,6.27824018932521,7.85415582972806,6.57181778519218,3.31133251185274,0.517875767294343,0,0,0.304465478312141,0.461230994512117,0,0,0.251333182659351,9.64060374164058,0,0,0.161766849947409,0,0,11.1835056730873,0,0,8.17462576667492,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0.712875546952214,1.24406970610093,6.06534620240819,10.3116509384372,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,3.3631438196072,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0.205809224758569,12.5559137533843,12.4291766331866,0.639864751605702,1.62565670302307,2.44848176511977,5.64713868945359,5.55945109612176,10.2721838100782,6.16887780007865,10.3760341476127,10.304743560811,9.15199771389294,8.38345574612217,14.3811105384675,10.1584883441106,6.77080329064848,0,0.342745537829186,1.1270773567308,1.4255592949172,2.13347735884388,1.47285221769669,3.79419222745544,6.6424566590821,6.75094529717912,7.03363834354263,2.07516838961004,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,1.20588579876208,2.03700681425136,1.72617682470486,0.972811360650212,2.19649130550465,1.43768206527355,2.23284568601102,3.12037673114561,2.77836765741823,2.69096120282868,2.8946611281802,4.43407656399851,0,0.325929952884052,0.509235257325564,0.704070744865506,1.67506257441816,1.19021820443007,1.36593553500459,1.7339865851681,0.44292937929755,1.11618338060241,1.14704320301017,3.45369963731791,1.88043776155965,0,0,6.39293554924747,6.89841865761831,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,1.13552068166615,0.35613120733451,0,2.14461159864296,5.30980553359851,1.21390318077491,2.41858845571801,6.22396763194464,6.79194353625777,3.68922177532713,5.94385074286909,6.5436071305951,7.12994756769443,6.32073515871632,4.21674434299995,6.18813259489121,1.70219802876894,0.18006109403131,1.16422815404479,0.428674070063185,0.709360934569094,0.356737635204141,0.658196082408484,1.522324745573,3.05073220482823,2.54198485036584,6.61585194164886,0.32977250588296,0,0.301564624640779,0,0.820704498725306,6.70405924248657,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.138199973804424,9.54670618015114,0.790839983952838,1.01659733563424,2.70013352054503,1.25452977608681,3.9305261474312,1.34864346384821,2.89287095038676,8.89970202745701,9.20266310371729,6.83473244395618,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0.608175645870493,0.410843828659309,0,0,0,0,0.147689527174577,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,2.44184548711471,2.15313255862742,4.19711540910196,2.89784391048286,4.31669693537719,4.2124873581471,1.07184189539533,6.01886524842436,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0,1.11123363900808,1.03017528619447,1.28367683836726,1.76888048234658,2.02783439912192,1.13175804831646,0.468207537349412,0.768301828858431,0.746661096422973,1.90517476513229,1.15884325944855,0.964546102318525,0.824171801606613,0.735994600671987,1.37147700954166,0.177475806159338,0.476872379894642,1.74415699958794,0.941093804153306,1.18460451048347,0.73171189149109,1.05227884575137,0.814824683075171,0.561142271657738,1.18635018124174,0.985044823755635,1.22769312950907,0.464810523557898,0.964533054905707,0,1.40358965067245,0.859484216193193,0,0.220591419119515,0.231867835620421
|short_description=p2@Sigirr
|short_description=p2@Sigirr
}}
}}

Latest revision as of 03:30, 26 September 2015

Short description:p2@Sigirr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sigirr_5end
Coexpression cluster:MCL_coexpression_mm9:297
Association with transcript: -9bp_to_ENSMUST00000097958, NM_023059, uc009kjk.1, uc009kjl.1, uc009kjm.1_5end
EntrezGene:Sigirr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sigirr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B913.11
Ileum epithelium, pool2.CNhs13232.10253-104C111.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G410.31
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A312.43
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E910.38
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E310.16
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H17.03
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I19.20
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell2.72e-089
epithelial cell of alimentary canal2.72e-089
epithelial cell2.83e-0825
endodermal cell1.54e-0720
endo-epithelial cell3.14e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:148286454..148286486,-&oldid=4230614"