FFCP PHASE1:Mm9::chr19:9003813..9003827,-: Difference between revisions
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{{FFCP|EntrezGene=19881|HGNC=|UniProt=P32958,Q3UZZ7|association_with_transcript=18bp_to_ENSMUST00000096242,NM_009073,uc008goc.2_5end|description=CAGE_peak_4_at_Rom1_5end|id=chr19:9003813..9003827,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,2.48e-10,8;CL:0000222,1.31e-08,7;CL:0000128,5.47e-08,6;CL:0000126,5.47e-08,6;CL:0000127,5.47e-08,6;CL:0000333,6.71e-08,10;CL:0000095,6.71e-08,10;CL:0000243,6.71e-08,10;CL:0000123,6.71e-08,10;CL:0000125,6.71e-08,10;CL:0000030,6.71e-08,10;CL:0000339,6.71e-08,10;CL:0000680,7.12e-08,6;CL:0000187,7.12e-08,6;CL:0000056,7.12e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.56e-10,7;UBERON:0006858,1.56e-10,7|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.645616617207881,0.703943610758334,0.234064526321993,0,0,0.513602189793617,0.262261207256992,0.999329285446988,0.607425802169478,0.699561878128147,0.315462165358238,0.411343300817216,0.84877930359606,0.595303031057488,0.695036658406197,0,0.95995453676044,0.91763712426868,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.76255545165808,1.92616169317078,2.0190142737785,3.12956537739216,1.09012578190223,4.17403747195497,1.55543919259427,2.09979632438044,2.87505128729943,0.838913030288682,2.90144856804538,1.34437519656986,3.8588915405392,1.43266719969378,2.06268836910977,0,0,0.633831403506179,0,1.77858959222228,1.7997994345628,0,0.7104801149461,1.79760066311043,4.2264013585371,0,0.135005938331691,0.210324961351382,1.14260393761521,0.441737081903227,0,0,0,0,1.0214987046815,0.614426133024974,0,0,0,0.837548997004143,2.8138130501584,1.06958773443767,0,0.569486723196412,0.186399445825301,0.151452386666368,0.302286240427142,1.15945795480671,0.860423876981386,0,0,0.649776417447669,0,1.26399978118577,1.70430322578058,4.67614808285164,2.47337702157238,0.563373679106722,10.2661181931454,0,0,0.432982082022428,1.01343946190039,0,0.11418387971906,0.517875767294343,6.38301197978747,2.4287945747259,4.87144765299426,4.38169444786511,4.82312449768392,1.64624189989987,3.14166478324189,0.247194967734374,1.01219549843938,0,3.07357014900077,2.65009822152472,4.363877278217,0,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,0.599162557619291,0.457500602818626,0,0.521472960576829,0.255715457330331,0,0.973447578406546,0.101839363850316,4.10543003013307,0,4.41927897361595,0.130120442962704,0,0.900310649026746,0.30140963567143,0.748401490664606,2.94661556655154,3.46696380870997,5.69147415625834,0,0,0,0.876782929710299,0.556094498451196,0,1.02891068203972,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.467061369468678,0,0.656669856316381,0.243206428637567,1.02339991197733,0.878200461164203,1.34206418760372,0.630869845692382,0,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0.379335801906163,0.571242563048644,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.147610147979602,0.784993639206874,0.740382983530803,0.296452627087149,0.667380422864376,0.589676985339609,1.12431056192427,0.811440485554012,0.964708639009667,1.01850340712568,1.43848068725405,0,0.549122826376163,0,0.372140947668503,0,0.757736633841335,0,0,1.10851914099963,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.478364305972461,0.655453258862952,0.690739927463582,0.723245292907558,0,0.54390568381871,0,0.275936746304732,0.80275294993896,0.703270119553219,0,1.76729649043061,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,0.516856586336442,0.727067458955011,0.356497378384721,0.948110273807448,1.05418608574999,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.493647061806363,1.2178597964584,2.3467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.542816324353403,0.358117032009409,0.492422699235184,0,0.556275906031529,0.341741761595705,0.206386867963223,1.29636169158798,1.50694765603753,0.956859594047176,1.60144721244566,0,0.279902904647316,0.552799895217695,2.86401185404534,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.269728692769641,0.578574190077352,1.30877970992015,0.388844919875379,0,0.56369293868419,0.299033092087958,0.496375471371293,0.194451188344048,0.904118764344118,0.168956125490778,0.469428954583016,0.651021924219751,0.524296722128554,0,1.15212002503146,0,0.202725215290164,0.410843828659309,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19881 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P32958,Q3UZZ7 | |||
|association_with_transcript=18bp_to_ENSMUST00000096242,NM_009073,uc008goc.2_5end | |||
|cluster_id=chr19:9003813..9003827,- | |||
|description=CAGE_peak_4_at_Rom1_5end | |||
|id=chr19:9003813..9003827,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.48e-10,8;CL:0000222,1.31e-08,7;CL:0000128,5.47e-08,6;CL:0000126,5.47e-08,6;CL:0000127,5.47e-08,6;CL:0000333,6.71e-08,10;CL:0000095,6.71e-08,10;CL:0000243,6.71e-08,10;CL:0000123,6.71e-08,10;CL:0000125,6.71e-08,10;CL:0000030,6.71e-08,10;CL:0000339,6.71e-08,10;CL:0000680,7.12e-08,6;CL:0000187,7.12e-08,6;CL:0000056,7.12e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.56e-10,7;UBERON:0006858,1.56e-10,7 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.645616617207881,0.703943610758334,0.234064526321993,0,0,0.513602189793617,0.262261207256992,0.999329285446988,0.607425802169478,0.699561878128147,0.315462165358238,0.411343300817216,0.84877930359606,0.595303031057488,0.695036658406197,0,0.95995453676044,0.91763712426868,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.76255545165808,1.92616169317078,2.0190142737785,3.12956537739216,1.09012578190223,4.17403747195497,1.55543919259427,2.09979632438044,2.87505128729943,0.838913030288682,2.90144856804538,1.34437519656986,3.8588915405392,1.43266719969378,2.06268836910977,0,0,0.633831403506179,0,1.77858959222228,1.7997994345628,0,0.7104801149461,1.79760066311043,4.2264013585371,0,0.135005938331691,0.210324961351382,1.14260393761521,0.441737081903227,0,0,0,0,1.0214987046815,0.614426133024974,0,0,0,0.837548997004143,2.8138130501584,1.06958773443767,0,0.569486723196412,0.186399445825301,0.151452386666368,0.302286240427142,1.15945795480671,0.860423876981386,0,0,0.649776417447669,0,1.26399978118577,1.70430322578058,4.67614808285164,2.47337702157238,0.563373679106722,10.2661181931454,0,0,0.432982082022428,1.01343946190039,0,0.11418387971906,0.517875767294343,6.38301197978747,2.4287945747259,4.87144765299426,4.38169444786511,4.82312449768392,1.64624189989987,3.14166478324189,0.247194967734374,1.01219549843938,0,3.07357014900077,2.65009822152472,4.363877278217,0,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,0.599162557619291,0.457500602818626,0,0.521472960576829,0.255715457330331,0,0.973447578406546,0.101839363850316,4.10543003013307,0,4.41927897361595,0.130120442962704,0,0.900310649026746,0.30140963567143,0.748401490664606,2.94661556655154,3.46696380870997,5.69147415625834,0,0,0,0.876782929710299,0.556094498451196,0,1.02891068203972,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.467061369468678,0,0.656669856316381,0.243206428637567,1.02339991197733,0.878200461164203,1.34206418760372,0.630869845692382,0,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0.379335801906163,0.571242563048644,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.147610147979602,0.784993639206874,0.740382983530803,0.296452627087149,0.667380422864376,0.589676985339609,1.12431056192427,0.811440485554012,0.964708639009667,1.01850340712568,1.43848068725405,0,0.549122826376163,0,0.372140947668503,0,0.757736633841335,0,0,1.10851914099963,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0.478364305972461,0.655453258862952,0.690739927463582,0.723245292907558,0,0.54390568381871,0,0.275936746304732,0.80275294993896,0.703270119553219,0,1.76729649043061,0,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,0.516856586336442,0.727067458955011,0.356497378384721,0.948110273807448,1.05418608574999,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.493647061806363,1.2178597964584,2.3467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.542816324353403,0.358117032009409,0.492422699235184,0,0.556275906031529,0.341741761595705,0.206386867963223,1.29636169158798,1.50694765603753,0.956859594047176,1.60144721244566,0,0.279902904647316,0.552799895217695,2.86401185404534,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.269728692769641,0.578574190077352,1.30877970992015,0.388844919875379,0,0.56369293868419,0.299033092087958,0.496375471371293,0.194451188344048,0.904118764344118,0.168956125490778,0.469428954583016,0.651021924219751,0.524296722128554,0,1.15212002503146,0,0.202725215290164,0.410843828659309,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.201932899896295,0.228620419965,0,0.194915761479505,0,0.467507608726276,1.81384306892169,0.221985953374065,0.538283139656854,1.00730769818447,0.386379188064381,0.750729901804728,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,0,0.170733605754134,1.21553358534147,0.209613162627982,1.2869045591501,0.44449345560323,0,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.576226371643824,0.34461281373368,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0,1.06485483695602,0.238436189947321,0.581385666529314,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,1.22223702461276,1.12228454331548,0.711810108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| |||
|short_description=p4@Rom1 | |||
}} |
Latest revision as of 04:54, 26 September 2015
Short description: | p4@Rom1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rom1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENSMUST00000096242, NM_009073, uc008goc.2_5end |
EntrezGene: | Rom1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.48e-10 | 8 |
mesodermal cell | 1.31e-08 | 7 |
oligodendrocyte | 5.47e-08 | 6 |
macroglial cell | 5.47e-08 | 6 |
astrocyte | 5.47e-08 | 6 |
migratory neural crest cell | 6.71e-08 | 10 |
neuron associated cell | 6.71e-08 | 10 |
glial cell (sensu Vertebrata) | 6.71e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.71e-08 | 10 |
glial cell | 6.71e-08 | 10 |
glioblast | 6.71e-08 | 10 |
glioblast (sensu Vertebrata) | 6.71e-08 | 10 |
muscle precursor cell | 7.12e-08 | 6 |
muscle cell | 7.12e-08 | 6 |
myoblast | 7.12e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.56e-10 | 7 |
adrenal/interrenal gland | 1.56e-10 | 7 |