FFCP PHASE1:Mm9::chr19:9003813..9003827,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:9003813..9003827,-
|short_description=p4@Rom1
|description=CAGE_peak_4_at_Rom1_5end
|association_with_transcript=18bp_to_ENSMUST00000096242,NM_009073,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19881 | |EntrezGene=19881 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P32958,Q3UZZ7 | |UniProt=P32958,Q3UZZ7 | ||
|association_with_transcript=18bp_to_ENSMUST00000096242,NM_009073,uc008goc.2_5end | |||
|cluster_id=chr19:9003813..9003827,- | |||
|description=CAGE_peak_4_at_Rom1_5end | |||
|id=chr19:9003813..9003827,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.48e-10,8;CL:0000222,1.31e-08,7;CL:0000128,5.47e-08,6;CL:0000126,5.47e-08,6;CL:0000127,5.47e-08,6;CL:0000333,6.71e-08,10;CL:0000095,6.71e-08,10;CL:0000243,6.71e-08,10;CL:0000123,6.71e-08,10;CL:0000125,6.71e-08,10;CL:0000030,6.71e-08,10;CL:0000339,6.71e-08,10;CL:0000680,7.12e-08,6;CL:0000187,7.12e-08,6;CL:0000056,7.12e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.56e-10,7;UBERON:0006858,1.56e-10,7 | |||
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| ||
|short_description=p4@Rom1 | |||
}} | }} |
Latest revision as of 04:54, 26 September 2015
Short description: | p4@Rom1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rom1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENSMUST00000096242, NM_009073, uc008goc.2_5end |
EntrezGene: | Rom1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.48e-10 | 8 |
mesodermal cell | 1.31e-08 | 7 |
oligodendrocyte | 5.47e-08 | 6 |
macroglial cell | 5.47e-08 | 6 |
astrocyte | 5.47e-08 | 6 |
migratory neural crest cell | 6.71e-08 | 10 |
neuron associated cell | 6.71e-08 | 10 |
glial cell (sensu Vertebrata) | 6.71e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.71e-08 | 10 |
glial cell | 6.71e-08 | 10 |
glioblast | 6.71e-08 | 10 |
glioblast (sensu Vertebrata) | 6.71e-08 | 10 |
muscle precursor cell | 7.12e-08 | 6 |
muscle cell | 7.12e-08 | 6 |
myoblast | 7.12e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.56e-10 | 7 |
adrenal/interrenal gland | 1.56e-10 | 7 |