FFCP PHASE1:Mm9::chr4:116230345..116230356,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:116230345..116230356,+
|short_description=p2@Gpbp1l1
|description=CAGE_peak_2_at_Gpbp1l1_5end
|association_with_transcript=13bp_to_NM_029868,uc008ugr.1_5en...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77110 | |EntrezGene=77110 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B1AU79,Q6NZP2 | |UniProt=B1AU79,Q6NZP2 | ||
|association_with_transcript=13bp_to_NM_029868,uc008ugr.1_5end | |||
|cluster_id=chr4:116230345..116230356,+ | |||
|description=CAGE_peak_2_at_Gpbp1l1_5end | |||
|id=chr4:116230345..116230356,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.09e-08,25;CL:0000075,4.83e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.20e-09!15;UBERON:0001242!1.15e-07!13;UBERON:0000060!1.15e-07!13;UBERON:0001262!1.15e-07!13;UBERON:0004786!1.15e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-11,15;UBERON:0000160,4.10e-10,31;UBERON:0001242,8.01e-10,13;UBERON:0001262,8.01e-10,13;UBERON:0004786,8.01e-10,13;UBERON:0004923,5.88e-08,24;UBERON:0005409,3.58e-07,47 | |||
|phase1_expression=0.960893082628764,5.93258192986914,5.45999087267443,4.23449895829562,5.50985302940982,1.51091344720701,1.40167584357315,0.258246646883153,3.37892933164,3.7450324211519,0.171217968225505,0.239316476986009,0.342401459862411,1.04904482902797,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.510259740906419,1.88652807281682,1.30599894569468,4.7997726838022,3.89995777814189,5.7423196411502,4.30761996159075,3.66301095566011,3.23039813075836,1.76421090831952,3.76941868114018,0,1.23012957516914,0,1.73310971850765,0.831173226792462,2.04169356262369,1.67412652294763,0.7813353445238,0.523523743973798,0,0,3.39857247121808,0.125896817975577,0.506884656097573,0.734187008646726,0.782391344348039,0,0.219686182734472,0.58328969722285,0,0,1.17447824240415,3.62681071005672,4.7053131879945,0,0.85960031981627,0.515672092277442,0.606949382578793,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.725827286159344,0.540023753326763,0.841299845405528,0,0.220868540951614,0.489963196859816,0.670918297127655,0,0,0.383062014255563,0,0.395658863190582,0.731901148819277,0.52091337055676,0.558365998002762,0,0.45839474333043,0,0.142371680799103,0,0.832988126665025,3.70300644523249,1.44932244350839,0,2.719885334831,0.539703191637817,0.649776417447669,1.34408066129201,0.561777680527007,0.511290967734173,0.779358013808606,0.70667914902068,1.97180787687353,1.28326477414318,0,0,0.649473123033642,1.26679932737549,2.02209778005913,1.48439043634778,0,0.29688427812965,0.693941307064543,0.913396434936424,2.30615497256059,1.50722640552623,1.41106448562846,1.0053327306374,0.247194967734374,2.60278842455841,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,0,3.57639877292028,2.63593273913025,1.19980546198682,3.30382590389968,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0.611036183101898,0.373220911830279,0.252722758433675,1.05220927943237,1.43132487258974,0.459804208866946,0.540186389416048,0.90422890701429,0.544291993210623,1.40925092313335,0.468508622798644,0.258703370739016,1.07783996466421,0.378212160335639,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,0.411564272815887,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,1.24275463521301,0.234526059981096,1.44049649168812,1.18372367792605,0.196764231747404,0.617068451549513,0.697601834251224,0,1.28441876603886,0.987359099480883,0.820837320395476,1.21603214318784,0.584799949701329,0.658650345873152,0.536825675041487,0.210289948564127,0.720332286654991,6.60837565967596,2.90895623329899,0.426576501070468,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,1.33157938278791,1.89811624617805,0.988193728344065,1.25667604400135,0.994782360205754,1.16978452271472,5.39291645192533,3.45820879799511,3.78368419183298,1.13800740571849,0.913988100877831,1.1270773567308,0.814605311381257,0.969762435838129,1.26244475802573,0.442655759869801,0.147610147979602,0.784993639206874,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.674586337154561,0,0,0,0.287696137450811,1.29708181420028,0,0,1.48856379067401,0.624075346229121,0.505157755894224,0.358794827043824,1.4473305640901,0.554259570499814,0.189491411770485,0.651859905768103,0.848725428875941,0.469380496577004,1.00503754465089,1.6663054862021,0.975668239288994,2.20689201748667,1.55025282754142,0.797273843287435,0.81931657357869,0.345369963731791,1.15719246865209,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,0.117211686592203,0.655739781506702,0.504941854408746,0.631016438832513,1.95219372148319,2.15423397732799,2.15071918157297,1.33679204449436,0.849229592366497,1.61924280669958,0.292255857911312,1.58115111178609,0,1.13552068166615,0.890328018336276,0.651547837414304,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,1.03371317267288,0.727067458955011,0,0.316036757935816,0,0,0,1.26042765821917,0.905510786479282,0.643011105094777,0.709360934569094,0.713475270408282,0.658196082408484,1.2178597964584,0.938686832254841,1.90648863777438,0.661585194164886,0.65954501176592,0.807322133479528,1.20625849856312,1.67121281604391,1.64140899745061,0.874442509889552,0.370850604021019,0.170870880797853,1.03193433981611,0.555583582109135,1.13021074202815,0.136694227721025,0.457556346413045,3.0596117398894,2.93898049879682,2.62579950228405,0,1.26534397432454,0.813277868507395,0.972048067396211,1.04544148007234,0.436725127492355,0.674321731924103,0.826534557253359,0.785267825952089,4.92536898508813,0,2.25477175473676,1.04661582230785,0.165458490457098,0.972255941720238,0.387479470433193,0.675824501963113,1.29092962510329,1.17183946359555,4.19437377702843,1.93267296660805,0.288030006257865,0.316011120628178,0.202725215290164,0.718976700153791,0.25984164595559,0.537080087002444,0.596044064343795,0.360586348559907,0,1.11063094942962,0.381034033274999,0.907435666231565,0.584747284438515,1.05833025804362,0.350630706544707,1.13365191807606,1.10992976687032,1.43542170575161,2.18250001273302,0.386379188064381,0,2.01466786693992,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0.62272408550506,0.798049746802062,0.853668028770671,0,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.188626341386076,0.655490552289177,0.576226371643824,0.574354689556133,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,0.441596760403192,1.37147700954166,0.354951612318675,1.43061713968393,0.436039249896986,0.658765662907314,0.169229215783353,0.365855945745545,0.263069711437843,0.679020569229309,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0.749431733813838,0.233931608445408,1.28922632428979,0.956441660344217,0,0.695603506861264 | |phase1_expression=0.960893082628764,5.93258192986914,5.45999087267443,4.23449895829562,5.50985302940982,1.51091344720701,1.40167584357315,0.258246646883153,3.37892933164,3.7450324211519,0.171217968225505,0.239316476986009,0.342401459862411,1.04904482902797,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.510259740906419,1.88652807281682,1.30599894569468,4.7997726838022,3.89995777814189,5.7423196411502,4.30761996159075,3.66301095566011,3.23039813075836,1.76421090831952,3.76941868114018,0,1.23012957516914,0,1.73310971850765,0.831173226792462,2.04169356262369,1.67412652294763,0.7813353445238,0.523523743973798,0,0,3.39857247121808,0.125896817975577,0.506884656097573,0.734187008646726,0.782391344348039,0,0.219686182734472,0.58328969722285,0,0,1.17447824240415,3.62681071005672,4.7053131879945,0,0.85960031981627,0.515672092277442,0.606949382578793,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.725827286159344,0.540023753326763,0.841299845405528,0,0.220868540951614,0.489963196859816,0.670918297127655,0,0,0.383062014255563,0,0.395658863190582,0.731901148819277,0.52091337055676,0.558365998002762,0,0.45839474333043,0,0.142371680799103,0,0.832988126665025,3.70300644523249,1.44932244350839,0,2.719885334831,0.539703191637817,0.649776417447669,1.34408066129201,0.561777680527007,0.511290967734173,0.779358013808606,0.70667914902068,1.97180787687353,1.28326477414318,0,0,0.649473123033642,1.26679932737549,2.02209778005913,1.48439043634778,0,0.29688427812965,0.693941307064543,0.913396434936424,2.30615497256059,1.50722640552623,1.41106448562846,1.0053327306374,0.247194967734374,2.60278842455841,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,0,3.57639877292028,2.63593273913025,1.19980546198682,3.30382590389968,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0.611036183101898,0.373220911830279,0.252722758433675,1.05220927943237,1.43132487258974,0.459804208866946,0.540186389416048,0.90422890701429,0.544291993210623,1.40925092313335,0.468508622798644,0.258703370739016,1.07783996466421,0.378212160335639,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,0.411564272815887,1.19420560091096,0.702213187313235,1.02939162845886,0.852490498186778,1.24275463521301,0.234526059981096,1.44049649168812,1.18372367792605,0.196764231747404,0.617068451549513,0.697601834251224,0,1.28441876603886,0.987359099480883,0.820837320395476,1.21603214318784,0.584799949701329,0.658650345873152,0.536825675041487,0.210289948564127,0.720332286654991,6.60837565967596,2.90895623329899,0.426576501070468,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,1.33157938278791,1.89811624617805,0.988193728344065,1.25667604400135,0.994782360205754,1.16978452271472,5.39291645192533,3.45820879799511,3.78368419183298,1.13800740571849,0.913988100877831,1.1270773567308,0.814605311381257,0.969762435838129,1.26244475802573,0.442655759869801,0.147610147979602,0.784993639206874,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.674586337154561,0,0,0,0.287696137450811,1.29708181420028,0,0,1.48856379067401,0.624075346229121,0.505157755894224,0.358794827043824,1.4473305640901,0.554259570499814,0.189491411770485,0.651859905768103,0.848725428875941,0.469380496577004,1.00503754465089,1.6663054862021,0.975668239288994,2.20689201748667,1.55025282754142,0.797273843287435,0.81931657357869,0.345369963731791,1.15719246865209,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,0.117211686592203,0.655739781506702,0.504941854408746,0.631016438832513,1.95219372148319,2.15423397732799,2.15071918157297,1.33679204449436,0.849229592366497,1.61924280669958,0.292255857911312,1.58115111178609,0,1.13552068166615,0.890328018336276,0.651547837414304,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,1.03371317267288,0.727067458955011,0,0.316036757935816,0,0,0,1.26042765821917,0.905510786479282,0.643011105094777,0.709360934569094,0.713475270408282,0.658196082408484,1.2178597964584,0.938686832254841,1.90648863777438,0.661585194164886,0.65954501176592,0.807322133479528,1.20625849856312,1.67121281604391,1.64140899745061,0.874442509889552,0.370850604021019,0.170870880797853,1.03193433981611,0.555583582109135,1.13021074202815,0.136694227721025,0.457556346413045,3.0596117398894,2.93898049879682,2.62579950228405,0,1.26534397432454,0.813277868507395,0.972048067396211,1.04544148007234,0.436725127492355,0.674321731924103,0.826534557253359,0.785267825952089,4.92536898508813,0,2.25477175473676,1.04661582230785,0.165458490457098,0.972255941720238,0.387479470433193,0.675824501963113,1.29092962510329,1.17183946359555,4.19437377702843,1.93267296660805,0.288030006257865,0.316011120628178,0.202725215290164,0.718976700153791,0.25984164595559,0.537080087002444,0.596044064343795,0.360586348559907,0,1.11063094942962,0.381034033274999,0.907435666231565,0.584747284438515,1.05833025804362,0.350630706544707,1.13365191807606,1.10992976687032,1.43542170575161,2.18250001273302,0.386379188064381,0,2.01466786693992,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0.62272408550506,0.798049746802062,0.853668028770671,0,0.628839487883947,0.183843508450014,0.222246727801615,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.188626341386076,0.655490552289177,0.576226371643824,0.574354689556133,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,0.441596760403192,1.37147700954166,0.354951612318675,1.43061713968393,0.436039249896986,0.658765662907314,0.169229215783353,0.365855945745545,0.263069711437843,0.679020569229309,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0.749431733813838,0.233931608445408,1.28922632428979,0.956441660344217,0,0.695603506861264 | ||
|short_description=p2@Gpbp1l1 | |||
}} | }} |
Latest revision as of 05:03, 26 September 2015
Short description: | p2@Gpbp1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpbp1l1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_029868, uc008ugr.1_5end |
EntrezGene: | Gpbp1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.09e-08 | 25 |
columnar/cuboidal epithelial cell | 4.83e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.06e-11 | 15 |
intestine | 4.10e-10 | 31 |
intestinal mucosa | 8.01e-10 | 13 |
wall of intestine | 8.01e-10 | 13 |
gastrointestinal system mucosa | 8.01e-10 | 13 |
organ component layer | 5.88e-08 | 24 |
gastrointestinal system | 3.58e-07 | 47 |