FFCP PHASE1:Mm9::chr17:3115120..3115134,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:3115120..3115134,+
|short_description=p7@Scaf8
|description=CAGE_peak_7_at_Scaf8_5end
|association_with_transcript=148bp_to_ENSMUST00000076734,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=106583 | |EntrezGene=106583 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=169 | |||
|TSSclassifier=NA | |||
|UniProt=Q6DID3,Q8C9D3,Q3TBS5 | |UniProt=Q6DID3,Q8C9D3,Q3TBS5 | ||
|association_with_transcript=148bp_to_ENSMUST00000076734,ENSMUST00000082356,ENSMUST00000170698,NM_134123,uc008aei.2,uc008aej.2_5end | |||
|cluster_id=chr17:3115120..3115134,+ | |||
|description=CAGE_peak_7_at_Scaf8_5end | |||
|id=chr17:3115120..3115134,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.34e-07!32;CL:0002032!3.34e-07!32;CL:0000037!3.34e-07!32;CL:0000566!3.34e-07!32;CL:0000837!3.34e-07!32;CL:0000542!5.71e-07!13;CL:0000051!5.71e-07!13;CL:0000838!6.12e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.38e-11,32;CL:0002032,1.38e-11,32;CL:0000037,1.38e-11,32;CL:0000837,1.38e-11,32;CL:0000838,1.80e-07,12;CL:0000791,2.68e-07,9;CL:0000789,2.68e-07,9;CL:0002420,2.68e-07,9;CL:0002419,2.68e-07,9;CL:0000790,2.68e-07,9;CL:0002320,3.23e-07,46;CL:0000134,3.23e-07,46;CL:0000542,7.66e-07,13;CL:0000051,7.66e-07,13;CL:0000738,9.60e-07,17;CL:0002087,9.60e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.76e-08!23;UBERON:0000974!8.76e-08!23;UBERON:0004807!8.76e-08!23;UBERON:0005058!8.76e-08!23;UBERON:0003351!8.76e-08!23;UBERON:0009113!8.76e-08!23;UBERON:0003295!8.76e-08!23;UBERON:0009722!8.76e-08!23;UBERON:0005562!8.76e-08!23;UBERON:0007690!8.76e-08!23;UBERON:0006562!5.23e-07!24;UBERON:0003408!5.23e-07!24;UBERON:0001557!5.23e-07!24;UBERON:0001042!5.23e-07!24;UBERON:0008814!5.23e-07!24;UBERON:0009145!5.23e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.23e-07,46 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.503637815735669,0,1.93684985162364,1.97104211012333,1.87251621057595,0.856089841127525,0.717949430958028,0.684802919724823,0.874204024189974,0,0,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,0,0.893618560807968,0.261199789138935,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,1.57057123192139,5.88231488031014,2.73218193983378,2.42755176515577,0.377690453926732,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0,0,1.51004345451963,1.45072428402269,2.68875039313971,0,0.286533439938757,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0.599200221036809,0,0.311068836925433,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0.255374676170375,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0.589257170947335,0.142371680799103,0.372798891650601,0.302904773332736,0.0755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0.433798070759735,1.76922110389975,0.323533699894818,0,0.484875253135222,0,0,0,0,3.95389910869537,3.59941638596045,2.79554499560742,0,0,0.125654352112864,0,0,0,0.162241263067758,0.611036183101898,0.124406970610093,0.252722758433675,0.210441855886474,0,0.459804208866946,0,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0.879755620819744,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,1.79130840136644,0.702213187313235,3.08817488537658,1.70498099637356,0.621377317606506,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.324275238183423,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.398282546508734,0.758671603812327,0.571242563048644,1.1270773567308,0,0.969762435838129,0.911765658574141,0.505892296994058,0,0.31399745568275,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0.757965647081939,0.488894929326078,0.848725428875941,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0,1.11618338060241,0.163863314715738,0.345369963731791,0.289298117163023,1.50791283939272,0,0,0.551873492609465,0,0.234423373184406,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.727067458955011,0,0,0,0,1.02131881726136,0.720244376125241,0.646793418913773,0,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,0.704015124191131,0.42366414172764,0.220528398054962,0.8244312647074,0,0.120625849856312,0.358117032009409,0.164140899745061,0.582961673259701,0,0,0,0.370389054739423,0.376736914009382,0.546776910884101,0,6.79913719975421,7.97723278244851,7.18639863783004,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.330613822901344,0,0,0,0,0.747582730219894,0.165458490457098,0.777804753376191,0,0.506868376472335,0.58678619322877,1.0416350787516,0.734015410979976,0.241584120826006,0.288030006257865,0.316011120628178,0.810900861160657,1.02710957164827,0.649604114888975,0.358053391334963,1.19208812868759,0.721172697119813,1.03382669022204,0.706765149637033,0.914481679859998,1.20991422164209,0.584747284438515,0.673482891482306,0.701261413089414,0,0.221985953374065,0.448569283047378,0.503653849092235,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,1.35004500046361,0,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0,0.385813221962283,0,0,0,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.503637815735669,0,1.93684985162364,1.97104211012333,1.87251621057595,0.856089841127525,0.717949430958028,0.684802919724823,0.874204024189974,0,0,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,0,0.893618560807968,0.261199789138935,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,1.57057123192139,5.88231488031014,2.73218193983378,2.42755176515577,0.377690453926732,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0,0,1.51004345451963,1.45072428402269,2.68875039313971,0,0.286533439938757,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0.599200221036809,0,0.311068836925433,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0.255374676170375,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0.589257170947335,0.142371680799103,0.372798891650601,0.302904773332736,0.0755715601067855,0.869593466105033,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0.433798070759735,1.76922110389975,0.323533699894818,0,0.484875253135222,0,0,0,0,3.95389910869537,3.59941638596045,2.79554499560742,0,0,0.125654352112864,0,0,0,0.162241263067758,0.611036183101898,0.124406970610093,0.252722758433675,0.210441855886474,0,0.459804208866946,0,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0.879755620819744,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,1.79130840136644,0.702213187313235,3.08817488537658,1.70498099637356,0.621377317606506,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.324275238183423,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.398282546508734,0.758671603812327,0.571242563048644,1.1270773567308,0,0.969762435838129,0.911765658574141,0.505892296994058,0,0.31399745568275,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0.757965647081939,0.488894929326078,0.848725428875941,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0,1.11618338060241,0.163863314715738,0.345369963731791,0.289298117163023,1.50791283939272,0,0,0.551873492609465,0,0.234423373184406,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,0.567760340833074,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.590603785761546,0.307435147943927,0,0.727067458955011,0,0,0,0,1.02131881726136,0.720244376125241,0.646793418913773,0,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,0.704015124191131,0.42366414172764,0.220528398054962,0.8244312647074,0,0.120625849856312,0.358117032009409,0.164140899745061,0.582961673259701,0,0,0,0.370389054739423,0.376736914009382,0.546776910884101,0,6.79913719975421,7.97723278244851,7.18639863783004,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.330613822901344,0,0,0,0,0.747582730219894,0.165458490457098,0.777804753376191,0,0.506868376472335,0.58678619322877,1.0416350787516,0.734015410979976,0.241584120826006,0.288030006257865,0.316011120628178,0.810900861160657,1.02710957164827,0.649604114888975,0.358053391334963,1.19208812868759,0.721172697119813,1.03382669022204,0.706765149637033,0.914481679859998,1.20991422164209,0.584747284438515,0.673482891482306,0.701261413089414,0,0.221985953374065,0.448569283047378,0.503653849092235,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,1.35004500046361,0,0.453142408984205,0.51776031175182,0.207574695168353,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0,0.385813221962283,0,0,0,0,0.220591419119515,0.463735671240843 | ||
|short_description=p7@Scaf8 | |||
}} | }} |
Latest revision as of 05:36, 26 September 2015
Short description: | p7@Scaf8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Scaf8_5end |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | 148bp_to_ENSMUST00000076734, ENSMUST00000082356, ENSMUST00000170698, NM_134123, uc008aei.2, uc008aej.2_5end |
EntrezGene: | Scaf8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.38e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.38e-11 | 32 |
hematopoietic stem cell | 1.38e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.38e-11 | 32 |
lymphoid lineage restricted progenitor cell | 1.80e-07 | 12 |
mature alpha-beta T cell | 2.68e-07 | 9 |
alpha-beta T cell | 2.68e-07 | 9 |
immature T cell | 2.68e-07 | 9 |
mature T cell | 2.68e-07 | 9 |
immature alpha-beta T cell | 2.68e-07 | 9 |
connective tissue cell | 3.23e-07 | 46 |
mesenchymal cell | 3.23e-07 | 46 |
lymphocyte | 7.66e-07 | 13 |
common lymphoid progenitor | 7.66e-07 | 13 |
leukocyte | 9.60e-07 | 17 |
nongranular leukocyte | 9.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.23e-07 | 46 |