FFCP PHASE1:Mm9::chr14:63741303..63741314,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr14:63741303..63741314,+ to FFCP PHASE1:Mm9::chr14:63741303..63741314,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13030 | |EntrezGene=13030 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=866 | |||
|TSSclassifier=NA | |||
|UniProt=P10605 | |UniProt=P10605 | ||
|association_with_transcript=1bp_to_ENSMUST00000006235,uc007uhh.1_5end | |||
|cluster_id=chr14:63741303..63741314,+ | |||
|description=CAGE_peak_3_at_Ctsb_5end | |||
|id=chr14:63741303..63741314,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.19e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.39e-14!75;UBERON:0001016!9.39e-14!75;UBERON:0001017!3.21e-13!73;UBERON:0005743!3.21e-13!73;UBERON:0004121!5.25e-13!102;UBERON:0000924!5.25e-13!102;UBERON:0006601!5.25e-13!102;UBERON:0000955!2.71e-10!50;UBERON:0006238!2.71e-10!50;UBERON:0001049!3.90e-10!52;UBERON:0005068!3.90e-10!52;UBERON:0006241!3.90e-10!52;UBERON:0007135!3.90e-10!52;UBERON:0002616!5.68e-10!49;UBERON:0000480!1.56e-08!308;UBERON:0000467!1.56e-08!308;UBERON:0007023!2.79e-08!51;UBERON:0002346!3.03e-08!71;UBERON:0003075!3.03e-08!71;UBERON:0007284!3.03e-08!71;UBERON:0000033!9.57e-08!63;UBERON:0004111!1.04e-07!122;UBERON:0000923!1.20e-07!314;UBERON:0005291!1.20e-07!314;UBERON:0006598!1.20e-07!314;UBERON:0002532!1.20e-07!314;UBERON:0000025!7.53e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.39e-14,75;UBERON:0001017,3.21e-13,73;UBERON:0004121,3.83e-11,95;UBERON:0000924,3.83e-11,95;UBERON:0006601,3.83e-11,95;UBERON:0000073,5.23e-11,54;UBERON:0001049,3.90e-10,52;UBERON:0005068,3.90e-10,52;UBERON:0006241,3.90e-10,52;UBERON:0007135,3.90e-10,52;UBERON:0000955,5.58e-09,47;UBERON:0006238,5.58e-09,47;UBERON:0002616,1.14e-08,46;UBERON:0010314,1.86e-08,92;UBERON:0000923,2.48e-08,291;UBERON:0010316,2.48e-08,291;UBERON:0005291,2.48e-08,291;UBERON:0006598,2.48e-08,291;UBERON:0010317,2.48e-08,291;UBERON:0002532,2.48e-08,291;UBERON:0007023,2.79e-08,51;UBERON:0004111,1.04e-07,122;UBERON:0005423,2.14e-07,304;UBERON:0002050,2.46e-07,294;UBERON:0000025,7.53e-07,114 | |||
|phase1_expression=52.3686730032676,30.3608604646244,32.3049459966571,36.5981695681264,29.5528480668345,19.1382369979554,20.5579123724063,30.8604743025367,3.94208422024667,3.27690336850791,3.93801326918661,5.58405112967355,26.7073138692681,21.7676802023304,39.6400616560639,33.2059438519315,78.3509303503524,26.498821890092,25.3661702170617,24.1902101524877,41.5011255937221,16.2837159969452,22.7243816550874,44.3179011137737,47.7171304619714,32.1569899904411,27.5687677541808,26.7184328530502,61.7576113233215,35.0321880366304,43.2374495777844,7.62036808151557,3.07532393792285,15.8481681015439,16.4645423258227,25.7663700305663,24.7044921077467,61.5241497183254,59.3814861838088,47.6406607016156,58.8231488031014,51.2284113718834,58.7467527167696,131.436277966503,140.00154201415,124.628244717782,120.488267029598,96.3671191201574,140.818843132796,201.429375440958,148.105634079634,146.627615652271,17.4493910300046,35.5427449585559,28.5679729271094,92.8706564089769,150.716589407786,127.371006792528,34.191481885272,47.0801971552109,58.9463205260747,135.198968295584,183.194727998895,193.928389074141,239.305659741208,203.197312874585,135.119649843801,117.955019733717,31.3142629171603,33.2114608295959,32.6003690094642,85.1239933523335,87.463942216839,25.4780862367104,28.9453322475074,43.203282970671,123.329786719315,109.428048739006,133.176864333163,31.2570501920559,41.0779519774819,31.7757156039624,171.139178387847,136.188551627667,125.752957920315,76.8980608086273,63.7825129979981,39.5166825149637,53.3112401065616,101.643748343627,59.4222201838439,53.346280372846,33.9985666853875,37.2395202230094,28.5901623676974,30.4658283226188,53.3688796500657,108.223254837067,108.070977914793,126.495567674702,64.365442837943,119.343623995316,163.075353412253,234.652012040599,44.1641723662877,42.5644573998166,46.5082489413601,34.5977155548752,43.760502336372,115.487984192434,43.1978463647678,60.5886301841161,62.4967997563919,70.8396410597326,71.3763452313728,119.383261763192,91.9565279971871,100.496553059339,53.9612436689423,55.3242626820139,54.989538096638,48.9724005666574,95.0597982212423,105.98664851818,97.1832719614432,50.5804969313011,25.4008063952551,31.7948447426506,26.3035370041244,151.138755159466,129.472670597671,31.0366249718775,125.848807819208,97.9390201575166,111.997756017603,92.8020024747574,57.0300437561771,56.107543745152,56.3571751307095,52.400022115732,25.6337272636526,29.4274693674845,28.0896922496345,33.9085840130359,28.3712201461037,28.4412459032367,28.4853242661576,48.6362336989349,17.8921434134259,23.2600478606418,30.967397852855,45.1543208800804,37.2583313962301,50.4965641457142,48.9761484650905,31.8454826909589,40.0261516768544,35.5140111818307,37.7937454196138,30.2403627901833,30.2538617375614,32.9513572473657,31.7237945684182,31.4822770795846,36.715572867196,32.5547522650571,41.3141038155414,38.6493283235331,45.0893988762936,53.8469282179432,52.3704509666228,51.023795611441,57.5221302062553,60.1244756046465,96.7333763394985,37.3543742936803,61.1274748520026,41.78318953284,27.5141843190452,28.1006372951131,31.3147931012687,43.563641318642,45.3651209443535,68.8616766527464,57.4180164468859,74.9380243994249,65.8498247056706,75.6034593756373,67.8475023174538,31.4586793028978,45.3889904736858,46.0016341217588,30.7261999543992,25.1346727741403,21.4144697778853,29.5294425375706,32.1961128698259,41.8009486546299,52.6760354245063,73.6574638418215,76.1443830030668,73.9149011891585,34.6849573691964,24.1925403288336,33.0219111790181,28.3326261604916,41.5863248846431,46.7883689919689,40.4855104332458,39.4143708307611,30.9678283140318,44.7535103496573,21.5652309791032,49.8668869875795,33.0759933501434,34.3507274008072,29.2417784040717,38.5954817090694,58.5667612828137,23.1179522359991,30.6374155711009,23.5945669227512,26.9893785531777,33.8362640032468,42.8478553594825,31.8067846008212,43.8225700615211,54.4803136535986,52.6200736569707,48.6674044705742,65.1022381634426,55.689887553882,171.90206369077,153.925308520695,41.7999632066181,38.9070812289673,136.949653259587,99.9815686631493,31.311574566945,89.8796500847568,31.5508219416257,39.0438744296638,43.5155263420254,49.4665411761783,54.5856751501866,46.1414745185797,48.1724734993124,49.683495844923,38.7382022387593,77.4384372576555,74.3766046491328,67.3087981862225,53.9155835460337,70.4422425092726,45.1333470355874,26.9486506132029,37.7904446205939,31.497048319235,38.979849860262,35.6624771614956,32.5619649391959,38.5345753246156,42.7796854061666,31.2876390356458,30.5713964867496,34.0347292719017,97.7061668513372,22.5076367539138,38.2901703996953,44.7964403216028,54.443451728178,67.9585195063889,64.5032160760314,73.3760527366184,68.9934821707308,99.5610733059955,37.0487708732336,43.0353120177263,36.0065671531869,38.7208978038761,49.4201504172985,51.7043834196943,59.7535715091194,128.314308991273,44.084687245846,42.9284685363503,36.1129328370938,36.5434806589101,41.0082683163076,45.2980782948915,24.4768939191152,26.590775941495,24.3231953895786,56.3255664628917,25.1487114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| |phase1_expression=52.3686730032676,30.3608604646244,32.3049459966571,36.5981695681264,29.5528480668345,19.1382369979554,20.5579123724063,30.8604743025367,3.94208422024667,3.27690336850791,3.93801326918661,5.58405112967355,26.7073138692681,21.7676802023304,39.6400616560639,33.2059438519315,78.3509303503524,26.498821890092,25.3661702170617,24.1902101524877,41.5011255937221,16.2837159969452,22.7243816550874,44.3179011137737,47.7171304619714,32.1569899904411,27.5687677541808,26.7184328530502,61.7576113233215,35.0321880366304,43.2374495777844,7.62036808151557,3.07532393792285,15.8481681015439,16.4645423258227,25.7663700305663,24.7044921077467,61.5241497183254,59.3814861838088,47.6406607016156,58.8231488031014,51.2284113718834,58.7467527167696,131.436277966503,140.00154201415,124.628244717782,120.488267029598,96.3671191201574,140.818843132796,201.429375440958,148.105634079634,146.627615652271,17.4493910300046,35.5427449585559,28.5679729271094,92.8706564089769,150.716589407786,127.371006792528,34.191481885272,47.0801971552109,58.9463205260747,135.198968295584,183.194727998895,193.928389074141,239.305659741208,203.197312874585,135.119649843801,117.955019733717,31.3142629171603,33.2114608295959,32.6003690094642,85.1239933523335,87.463942216839,25.4780862367104,28.9453322475074,43.203282970671,123.329786719315,109.428048739006,133.176864333163,31.2570501920559,41.0779519774819,31.7757156039624,171.139178387847,136.188551627667,125.752957920315,76.8980608086273,63.7825129979981,39.5166825149637,53.3112401065616,101.643748343627,59.4222201838439,53.346280372846,33.9985666853875,37.2395202230094,28.5901623676974,30.4658283226188,53.3688796500657,108.223254837067,108.070977914793,126.495567674702,64.365442837943,119.343623995316,163.075353412253,234.652012040599,44.1641723662877,42.5644573998166,46.5082489413601,34.5977155548752,43.760502336372,115.487984192434,43.1978463647678,60.5886301841161,62.4967997563919,70.8396410597326,71.3763452313728,119.383261763192,91.9565279971871,100.496553059339,53.9612436689423,55.3242626820139,54.989538096638,48.9724005666574,95.0597982212423,105.98664851818,97.1832719614432,50.5804969313011,25.4008063952551,31.7948447426506,26.3035370041244,151.138755159466,129.472670597671,31.0366249718775,125.848807819208,97.9390201575166,111.997756017603,92.8020024747574,57.0300437561771,56.107543745152,56.3571751307095,52.400022115732,25.6337272636526,29.4274693674845,28.0896922496345,33.9085840130359,28.3712201461037,28.4412459032367,28.4853242661576,48.6362336989349,17.8921434134259,23.2600478606418,30.967397852855,45.1543208800804,37.2583313962301,50.4965641457142,48.9761484650905,31.8454826909589,40.0261516768544,35.5140111818307,37.7937454196138,30.2403627901833,30.2538617375614,32.9513572473657,31.7237945684182,31.4822770795846,36.715572867196,32.5547522650571,41.3141038155414,38.6493283235331,45.0893988762936,53.8469282179432,52.3704509666228,51.023795611441,57.5221302062553,60.1244756046465,96.7333763394985,37.3543742936803,61.1274748520026,41.78318953284,27.5141843190452,28.1006372951131,31.3147931012687,43.563641318642,45.3651209443535,68.8616766527464,57.4180164468859,74.9380243994249,65.8498247056706,75.6034593756373,67.8475023174538,31.4586793028978,45.3889904736858,46.0016341217588,30.7261999543992,25.1346727741403,21.4144697778853,29.5294425375706,32.1961128698259,41.8009486546299,52.6760354245063,73.6574638418215,76.1443830030668,73.9149011891585,34.6849573691964,24.1925403288336,33.0219111790181,28.3326261604916,41.5863248846431,46.7883689919689,40.4855104332458,39.4143708307611,30.9678283140318,44.7535103496573,21.5652309791032,49.8668869875795,33.0759933501434,34.3507274008072,29.2417784040717,38.5954817090694,58.5667612828137,23.1179522359991,30.6374155711009,23.5945669227512,26.9893785531777,33.8362640032468,42.8478553594825,31.8067846008212,43.8225700615211,54.4803136535986,52.6200736569707,48.6674044705742,65.1022381634426,55.689887553882,171.90206369077,153.925308520695,41.7999632066181,38.9070812289673,136.949653259587,99.9815686631493,31.311574566945,89.8796500847568,31.5508219416257,39.0438744296638,43.5155263420254,49.4665411761783,54.5856751501866,46.1414745185797,48.1724734993124,49.683495844923,38.7382022387593,77.4384372576555,74.3766046491328,67.3087981862225,53.9155835460337,70.4422425092726,45.1333470355874,26.9486506132029,37.7904446205939,31.497048319235,38.979849860262,35.6624771614956,32.5619649391959,38.5345753246156,42.7796854061666,31.2876390356458,30.5713964867496,34.0347292719017,97.7061668513372,22.5076367539138,38.2901703996953,44.7964403216028,54.443451728178,67.9585195063889,64.5032160760314,73.3760527366184,68.9934821707308,99.5610733059955,37.0487708732336,43.0353120177263,36.0065671531869,38.7208978038761,49.4201504172985,51.7043834196943,59.7535715091194,128.314308991273,44.084687245846,42.9284685363503,36.1129328370938,36.5434806589101,41.0082683163076,45.2980782948915,24.4768939191152,26.590775941495,24.3231953895786,56.3255664628917,25.1487114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| ||
|short_description=p3@Ctsb | |||
}} | }} |
Latest revision as of 05:44, 26 September 2015
Short description: | p3@Ctsb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ctsb_5end |
Coexpression cluster: | MCL_coexpression_mm9:866 |
Association with transcript: | 1bp_to_ENSMUST00000006235, uc007uhh.1_5end |
EntrezGene: | Ctsb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 9.39e-14 | 75 |
central nervous system | 3.21e-13 | 73 |
ectoderm-derived structure | 3.83e-11 | 95 |
ectoderm | 3.83e-11 | 95 |
presumptive ectoderm | 3.83e-11 | 95 |
regional part of nervous system | 5.23e-11 | 54 |
neural tube | 3.90e-10 | 52 |
neural rod | 3.90e-10 | 52 |
future spinal cord | 3.90e-10 | 52 |
neural keel | 3.90e-10 | 52 |
brain | 5.58e-09 | 47 |
future brain | 5.58e-09 | 47 |
regional part of brain | 1.14e-08 | 46 |
structure with developmental contribution from neural crest | 1.86e-08 | 92 |
germ layer | 2.48e-08 | 291 |
germ layer / neural crest | 2.48e-08 | 291 |
embryonic tissue | 2.48e-08 | 291 |
presumptive structure | 2.48e-08 | 291 |
germ layer / neural crest derived structure | 2.48e-08 | 291 |
epiblast (generic) | 2.48e-08 | 291 |
adult organism | 2.79e-08 | 51 |
anatomical conduit | 1.04e-07 | 122 |
developing anatomical structure | 2.14e-07 | 304 |
embryonic structure | 2.46e-07 | 294 |
tube | 7.53e-07 | 114 |