FFCP PHASE1:Mm9::chr5:88356595..88356616,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12994 | |EntrezGene=12994 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=37 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-219bp_to_ENSMUST00000148793_5end | |association_with_transcript=-219bp_to_ENSMUST00000148793_5end | ||
|cluster_id=chr5:88356595..88356616,+ | |||
|description=CAGE_peak_3_at_Csn3_5end | |description=CAGE_peak_3_at_Csn3_5end | ||
|id=chr5:88356595..88356616,+ | |id=chr5:88356595..88356616,+ | ||
|ontology_enrichment_celltype=CL:0000107!1.26e-20!9;CL:0000393!7.50e-09!39;CL:0000211!7.50e-09!39;CL:0000540!8.11e-08!33;CL:0000047!8.11e-08!33;CL:0000031!8.11e-08!33;CL:0000404!8.11e-08!33;CL:0000055!8.60e-07!50 | |ontology_enrichment_celltype=CL:0000107!1.26e-20!9;CL:0000393!7.50e-09!39;CL:0000211!7.50e-09!39;CL:0000540!8.11e-08!33;CL:0000047!8.11e-08!33;CL:0000031!8.11e-08!33;CL:0000404!8.11e-08!33;CL:0000055!8.60e-07!50 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.26e-20!9;UBERON:0000010!6.76e-17!11;UBERON:0001911!2.05e-16!2;UBERON:0000076!2.05e-16!2;UBERON:0005333!2.05e-16!2;UBERON:0008425!2.05e-16!2;UBERON:0005311!2.05e-16!2;UBERON:0002005!4.61e-11!3;UBERON:0005428!4.61e-11!3;UBERON:0000013!9.09e-11!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.68e-58,2;UBERON:0000076,1.68e-58,2;UBERON:0005333,1.68e-58,2;UBERON:0008425,1.68e-58,2;UBERON:0005311,1.68e-58,2;UBERON:0005157,4.59e-14,20;UBERON:0003100,1.07e-11,11;UBERON:0010313,7.15e-11,3;UBERON:0002342,7.15e-11,3;UBERON:0002005,7.15e-11,3;UBERON:0005428,7.15e-11,3;UBERON:0005062,7.15e-11,3;UBERON:0005085,4.49e-10,13;UBERON:0005153,5.82e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,235.555086776118,65.3970088742216,0,0,0,0,1.57754109708128,0.780877488593277,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,235.555086776118,65.3970088742216,0,0,0,0,1.57754109708128,0.780877488593277,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Csn3 | |short_description=p3@Csn3 | ||
}} | }} |
Latest revision as of 07:11, 26 September 2015
Short description: | p3@Csn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Csn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | -219bp_to_ENSMUST00000148793_5end |
EntrezGene: | Csn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.68e-58 | 2 |
external ectoderm | 1.68e-58 | 2 |
mammary bud | 1.68e-58 | 2 |
mammary ridge | 1.68e-58 | 2 |
mammary placode | 1.68e-58 | 2 |
epithelial fold | 4.59e-14 | 20 |
female organism | 1.07e-11 | 11 |
neural crest-derived structure | 7.15e-11 | 3 |
neural crest | 7.15e-11 | 3 |
enteric nervous system | 7.15e-11 | 3 |
vagal neural crest | 7.15e-11 | 3 |
neural fold | 7.15e-11 | 3 |
ectodermal placode | 4.49e-10 | 13 |
epithelial bud | 5.82e-08 | 17 |