FFCP PHASE1:Mm9::chr7:19589708..19589726,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=272359 | |EntrezGene=272359 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R3Y8 | |UniProt=Q8R3Y8 | ||
|association_with_transcript=294bp_to_ENSMUST00000053713,NM_178757,uc009fkc.1_5end | |association_with_transcript=294bp_to_ENSMUST00000053713,NM_178757,uc009fkc.1_5end | ||
|cluster_id=chr7:19589708..19589726,+ | |||
|description=CAGE_peak_5_at_Irf2bp1_5end | |description=CAGE_peak_5_at_Irf2bp1_5end | ||
|id=chr7:19589708..19589726,+ | |id=chr7:19589708..19589726,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,6.20e-07,6;CL:0002489,6.20e-07,6;CL:0000898,6.20e-07,6;CL:0000809,6.20e-07,6;CL:0000810,6.20e-07,6;CL:0000895,6.20e-07,6;CL:0000808,6.20e-07,6;CL:0000894,6.20e-07,6;CL:0000806,6.20e-07,6;CL:0000807,6.20e-07,6;CL:0000805,6.20e-07,6;CL:0002425,6.20e-07,6;CL:0002436,6.20e-07,6;CL:0002427,6.20e-07,6;CL:0002428,6.20e-07,6;CL:0002429,6.20e-07,6;CL:0002433,6.20e-07,6;CL:0002431,6.20e-07,6;CL:0002432,6.20e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.32e-07!128;UBERON:0001555!4.32e-07!128;UBERON:0007026!4.32e-07!128;UBERON:0004119!6.18e-07!130;UBERON:0000925!6.18e-07!130;UBERON:0006595!6.18e-07!130 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.503637815735669,0.233612640595526,0.387369970324729,4.92760527530834,5.14941957908386,0.513653904676515,1.19658238493005,0,0.262261207256992,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0.215471232685889,0.570070258369122,1.00812051903972,0,1.27006134691926,1.23012957516914,0,0.577703239502549,2.32728503501889,1.42918549383658,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0.782391344348039,0.65407546914134,0.659058548203415,0.388859798148567,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,1.4209602298922,0,0.384218305321555,0,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.996601765593721,0.186399445825301,0,0.302286240427142,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.378212160335639,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0.59710280045548,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0.528901133327089,0.213288250535234,0.232236671860439,1.28867461322093,1.21010114774006,0.22237804384487,0.951128130562796,1.42358718463353,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0.246794327843601,1.48226313543574,0.667380422864376,0.982794975566015,0.899448449539415,0.608580364165509,0.241177159752417,2.03700681425136,0.287696137450811,0.324270453550071,0,0,0.372140947668503,1.24815069245824,0.757736633841335,0.538192240565737,0,0,0.757965647081939,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0,0,0.430846795465598,0.477937595905104,0,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0,0,1.32745138339963,0.971122544619926,0.604647113929502,0.565815239267694,0.590603785761546,0,0,0.363533729477506,1.06949213515416,2.21225730555071,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,0.582961673259701,0.18542530201051,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0,0,0.138199973804424,0,0.316335993581135,1.42323626988794,0.540026704109006,0,0,0.269728692769641,0.330613822901344,0,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.469428954583016,0,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.51968329191118,0.537080087002444,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.302478555410522,0,0.0962118416403295,0.116876902181569,0,0.443971906748129,0.179427713218951,0.335769232728157,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0.798049746802062,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0.500895729946347,0.503637815735669,0.233612640595526,0.387369970324729,4.92760527530834,5.14941957908386,0.513653904676515,1.19658238493005,0,0.262261207256992,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0.215471232685889,0.570070258369122,1.00812051903972,0,1.27006134691926,1.23012957516914,0,0.577703239502549,2.32728503501889,1.42918549383658,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0.782391344348039,0.65407546914134,0.659058548203415,0.388859798148567,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,1.4209602298922,0,0.384218305321555,0,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.996601765593721,0.186399445825301,0,0.302286240427142,0.289864488701678,0,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.29688427812965,0.520455980298408,0.608930956624282,0.691846491768175,0,0.117588707135705,0,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.239630249011841,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0,0,0,0,0.305518091550949,0.248813941220186,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.378212160335639,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0.59710280045548,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0.528901133327089,0.213288250535234,0.232236671860439,1.28867461322093,1.21010114774006,0.22237804384487,0.951128130562796,1.42358718463353,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0.246794327843601,1.48226313543574,0.667380422864376,0.982794975566015,0.899448449539415,0.608580364165509,0.241177159752417,2.03700681425136,0.287696137450811,0.324270453550071,0,0,0.372140947668503,1.24815069245824,0.757736633841335,0.538192240565737,0,0,0.757965647081939,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0,0,0.430846795465598,0.477937595905104,0,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0,0,1.32745138339963,0.971122544619926,0.604647113929502,0.565815239267694,0.590603785761546,0,0,0.363533729477506,1.06949213515416,2.21225730555071,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,0.582961673259701,0.18542530201051,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0,0,0.138199973804424,0,0.316335993581135,1.42323626988794,0.540026704109006,0,0,0.269728692769641,0.330613822901344,0,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.469428954583016,0,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.51968329191118,0.537080087002444,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.302478555410522,0,0.0962118416403295,0.116876902181569,0,0.443971906748129,0.179427713218951,0.335769232728157,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0.798049746802062,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p5@Irf2bp1 | |short_description=p5@Irf2bp1 | ||
}} | }} |
Latest revision as of 07:59, 26 September 2015
Short description: | p5@Irf2bp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Irf2bp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 294bp_to_ENSMUST00000053713, NM_178757, uc009fkc.1_5end |
EntrezGene: | Irf2bp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 6.20e-07 | 6 |
double negative thymocyte | 6.20e-07 | 6 |
naive T cell | 6.20e-07 | 6 |
double-positive, alpha-beta thymocyte | 6.20e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 6.20e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.20e-07 | 6 |
DN4 thymocyte | 6.20e-07 | 6 |
DN1 thymic pro-T cell | 6.20e-07 | 6 |
DN2 thymocyte | 6.20e-07 | 6 |
DN3 thymocyte | 6.20e-07 | 6 |
immature single positive thymocyte | 6.20e-07 | 6 |
early T lineage precursor | 6.20e-07 | 6 |
mature CD4 single-positive thymocyte | 6.20e-07 | 6 |
resting double-positive thymocyte | 6.20e-07 | 6 |
double-positive blast | 6.20e-07 | 6 |
CD69-positive double-positive thymocyte | 6.20e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 6.20e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.20e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 6.20e-07 | 6 |