FFCP PHASE1:Mm9::chr14:70499890..70499951,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57784 | |EntrezGene=57784 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JI08 | |UniProt=Q9JI08 | ||
|association_with_transcript=0bp_to_ENSMUST00000022680,NM_021328,uc007une.1_5end | |association_with_transcript=0bp_to_ENSMUST00000022680,NM_021328,uc007une.1_5end | ||
|cluster_id=chr14:70499890..70499951,+ | |||
|description=CAGE_peak_1_at_Bin3_5end | |description=CAGE_peak_1_at_Bin3_5end | ||
|id=chr14:70499890..70499951,+ | |id=chr14:70499890..70499951,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.32e-11!70;UBERON:0002193!2.14e-10!48;UBERON:0000926!2.68e-10!193;UBERON:0004120!2.68e-10!193;UBERON:0006603!2.68e-10!193;UBERON:0003104!2.34e-09!131;UBERON:0009142!2.34e-09!131;UBERON:0002390!4.50e-09!45;UBERON:0003061!4.50e-09!45;UBERON:0002204!5.69e-09!32;UBERON:0001007!4.27e-07!128;UBERON:0001555!4.27e-07!128;UBERON:0007026!4.27e-07!128;UBERON:0004119!4.29e-07!130;UBERON:0000925!4.29e-07!130;UBERON:0006595!4.29e-07!130 | |ontology_enrichment_uberon=UBERON:0002405!3.32e-11!70;UBERON:0002193!2.14e-10!48;UBERON:0000926!2.68e-10!193;UBERON:0004120!2.68e-10!193;UBERON:0006603!2.68e-10!193;UBERON:0003104!2.34e-09!131;UBERON:0009142!2.34e-09!131;UBERON:0002390!4.50e-09!45;UBERON:0003061!4.50e-09!45;UBERON:0002204!5.69e-09!32;UBERON:0001007!4.27e-07!128;UBERON:0001555!4.27e-07!128;UBERON:0007026!4.27e-07!128;UBERON:0004119!4.29e-07!130;UBERON:0000925!4.29e-07!130;UBERON:0006595!4.29e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.14e-10,48;UBERON:0002405,2.14e-10,48;UBERON:0002390,4.50e-09,45;UBERON:0003061,4.50e-09,45;UBERON:0002204,5.69e-09,32;UBERON:0001007,2.95e-08,116;UBERON:0001555,2.95e-08,116;UBERON:0007026,2.95e-08,116;UBERON:0004119,3.08e-08,118;UBERON:0000925,3.08e-08,118;UBERON:0006595,3.08e-08,118;UBERON:0004921,1.22e-07,114;UBERON:0000926,1.88e-07,120;UBERON:0004120,1.88e-07,120;UBERON:0006603,1.88e-07,120 | |||
|phase1_expression=25.1433689954527,20.2405736430829,28.2099528421512,14.5182821427278,21.5385163876929,17.7952028226603,23.5948767001481,35.638037269875,14.6420271037733,15.2141942109296,21.9158999328646,24.3305084935776,33.2129416066539,35.8423649917889,20.6528052325711,30.3712901084739,38.4759032970481,54.2594924416169,48.6756239300373,47.5316410013794,29.7651515528744,25.8156473122302,29.2543763835608,31.5185072903011,31.6584807872695,22.9692785646008,21.1073378117947,23.9173068281337,26.0332084655232,25.455043105753,29.2684274065002,20.9560122241678,19.0670084151217,0,24.2635360591071,18.7845149255096,21.029443695024,198.802524600031,165.643093039046,196.844927734148,217.057419083444,191.252735788365,222.363741688268,29.4598554062851,28.0814099478055,27.1649193199289,20.342174953049,18.0960879795771,25.9229695626677,17.6931208157598,17.2183298599196,15.8127820801469,32.0464777570276,20.3101399763176,25.2070349356848,23.1533492432352,26.6476099143044,28.8776371675368,13.1505699558739,10.5798195854407,16.4796164911607,24.3968063089775,21.3430751066673,40.0455374190223,43.5101199529469,43.3392870117121,18.8748069626595,12.2949857702897,14.5165457231869,13.7706057098324,13.8814474491912,9.42648248532552,13.2521124570968,12.8615339175702,14.8560480078266,10.1114066527102,2.20231761998777,10.0872997087298,5.83704826373725,10.0233578674947,11.7104183811084,14.0646610050325,6.70039197603314,5.06486349028512,9.62628960993904,8.2496003932627,8.11518580554887,10.0655700745662,42.4066682665831,45.5696507443917,29.5661778475711,20.6501730475533,10.1995700056163,8.63525106620507,16.2444104361917,12.0967259516281,16.0106638950197,26.0758393544428,28.0568884971098,20.1403557470894,25.9151892389092,16.6824420638613,15.2883143823987,7.11066703153331,20.3501578550541,22.8023878927589,19.2099289105618,23.8644308612835,64.9934087954401,23.4538579722423,16.1341353892506,17.6589977421042,24.2146272118861,23.0605640045513,31.2785960980975,23.625319169979,23.9779118702343,13.5923395504717,30.0767587662957,19.0884882937943,26.7218237337076,21.819386391085,26.0948465705371,13.1751358655196,16.127396424636,20.1811073614787,27.9169240098794,27.5955256256968,31.6404865411931,12.5824137100051,12.3525162761029,15.2041766056566,11.298580812498,14.3200656104985,9.55825004973976,12.0058534670141,23.3212143217224,31.5993705349636,18.9542068825256,17.0457903268044,17.0457780281142,18.3921683546778,16.7457780718975,20.9479696791644,20.4109497453984,21.5231050078548,21.6450983732974,17.5918292102531,16.5987354558289,17.2086532952716,19.0027214097065,16.001288467213,21.409638190371,24.3776516565517,31.8962311432312,17.5150154800274,25.9818879305897,34.7419674604865,29.8371674365372,14.4988040774851,15.2441938987713,12.604344302271,12.7842157216014,13.3799677588235,12.9584374825398,13.2544348507732,16.3646774853768,17.2812706703411,11.0255099442032,14.7750717671186,15.8894866709877,15.4971986670852,16.9053588774109,16.238976670005,15.1408762966172,15.3327872445134,32.3810407324122,20.6271441997565,16.2099070406778,19.043407092556,18.9435168143477,24.2020229548011,18.6797556829691,21.1150444984941,17.0830462156024,25.5283379822217,25.3848560888272,28.8486884459669,21.2510854959841,15.2799299471218,20.7492527879706,25.6892242498134,21.2428049067451,18.7367560679955,21.4144697778853,17.3103628668517,14.9343415119072,26.2307966389791,23.2078091246024,17.5656076095727,23.2358117205235,23.9390498008293,20.1587786419261,24.3593854345497,23.193961423358,27.658039823337,24.5460746880089,33.7648023653384,28.7727212513004,29.9203982948843,35.0212089834076,28.5543869715605,24.4405951096503,32.3762624471598,29.0195035996541,20.4588891137161,17.5809465251474,44.3848039654298,26.4197061938245,14.4013472945568,15.9705676913185,17.8232340063948,20.1833613528112,20.6032696653433,22.8521895250573,28.2943789393808,24.1181770482472,25.0255099303116,25.6722177538554,27.529036872244,25.7300622980184,28.9298117163023,85.9510318453852,49.4954172275026,24.0964493779328,28.9733583619969,11.8807436590966,11.9555920324047,14.7541450839008,16.1581393410799,10.4117712407365,11.7131623288992,18.7418356027535,27.2424429665909,30.9690156974528,30.8553418559827,17.0020494703456,20.7501659117031,18.5785255634866,14.4594592389813,23.1362338889478,20.2994788180671,28.1794439681687,26.5601897985782,11.9470624505967,21.1219153454834,20.8603254305678,16.2200368590072,15.651000322681,18.7535440245796,26.1012576099903,22.5390912276053,21.746340081468,20.542389265828,18.9753495434998,12.3762651897824,19.4050575279659,19.9867814374754,21.7322588755028,18.4329850127169,20.2167866352192,18.1936193954112,17.2776471632227,19.1812917942198,19.477751769288,22.4541995115649,33.2997881062992,44.1895157883166,38.1056047002337,30.3977141637906,31.6336711608312,33.3206026482474,22.4440244204985,11.1255181206306,37.9333355371233,24.3536504196603,34.4461820907664,35.0365330028725,29.7993416431835,29.7411625168479,35.1855350087281,33.7283000100016,29.2983944465378,23.8667654503778,15.8167996790568,18.5020715085432,21.6010681643603,21.7451827855047,23.5831568845872,23.6012606173436,25.0439970847768,26.437350140387,28.2560641776108,23.6108938973032,91.881949005523,17.3439193411015,19.0277264025662,14.7782903141476,17.0490966990605,14.6991829176977,21.945803626756,18.4890226478409,17.6163698635194,43.9683099903331,43.7805609511956,26.544934132767,20.6779719595967,25.4723173768772,22.0865399062252,23.0944437411051,24.4378066380956,28.2459306371927,26.8794939457731,28.4725388853776,33.2261677015799,32.7685101694732,32.8433058092966,32.8082379993523,36.2318396762864,21.3126560598299,9.32341004171072,12.2907983554982,9.23365390002431,23.7623200659594,26.6509115140678,27.4727436400898,33.2270987572552,24.0754609936974,9.60078132449013,8.74617949363636,7.44764167471216,12.7171354934329,8.22099023724771,8.3093328712867,9.45031500324528,9.45674526770863,8.15656336171568,9.83744592328458,13.0772057956063,18.7541690498485,16.561159758151,18.4761104971903,14.4633082213308,11.9498280492509,19.7799587743438,14.6284890639615,12.5158491740808,19.2049880940486,15.4622372933046,16.7877443833608,15.6381317474704,16.7745899300758,19.5854949138641,19.0517476513229,14.7173093949966,15.2398284166327,17.7196937345422,16.7806768953213,12.343293085875,14.9079677173843,17.8827142460491,15.9881058295561,14.2105164427149,19.4613598150856,18.1098693144045,20.5194374921517,19.0125759384206,16.8342681497322,14.2362021749009,16.4502485567191,10.6400071224119,16.2683683245264,19.6764743200764,21.4837097026634,18.4805970671873,21.0573632967332,24.6761948368808,23.8238732649077,17.8538233427725 | |phase1_expression=25.1433689954527,20.2405736430829,28.2099528421512,14.5182821427278,21.5385163876929,17.7952028226603,23.5948767001481,35.638037269875,14.6420271037733,15.2141942109296,21.9158999328646,24.3305084935776,33.2129416066539,35.8423649917889,20.6528052325711,30.3712901084739,38.4759032970481,54.2594924416169,48.6756239300373,47.5316410013794,29.7651515528744,25.8156473122302,29.2543763835608,31.5185072903011,31.6584807872695,22.9692785646008,21.1073378117947,23.9173068281337,26.0332084655232,25.455043105753,29.2684274065002,20.9560122241678,19.0670084151217,0,24.2635360591071,18.7845149255096,21.029443695024,198.802524600031,165.643093039046,196.844927734148,217.057419083444,191.252735788365,222.363741688268,29.4598554062851,28.0814099478055,27.1649193199289,20.342174953049,18.0960879795771,25.9229695626677,17.6931208157598,17.2183298599196,15.8127820801469,32.0464777570276,20.3101399763176,25.2070349356848,23.1533492432352,26.6476099143044,28.8776371675368,13.1505699558739,10.5798195854407,16.4796164911607,24.3968063089775,21.3430751066673,40.0455374190223,43.5101199529469,43.3392870117121,18.8748069626595,12.2949857702897,14.5165457231869,13.7706057098324,13.8814474491912,9.42648248532552,13.2521124570968,12.8615339175702,14.8560480078266,10.1114066527102,2.20231761998777,10.0872997087298,5.83704826373725,10.0233578674947,11.7104183811084,14.0646610050325,6.70039197603314,5.06486349028512,9.62628960993904,8.2496003932627,8.11518580554887,10.0655700745662,42.4066682665831,45.5696507443917,29.5661778475711,20.6501730475533,10.1995700056163,8.63525106620507,16.2444104361917,12.0967259516281,16.0106638950197,26.0758393544428,28.0568884971098,20.1403557470894,25.9151892389092,16.6824420638613,15.2883143823987,7.11066703153331,20.3501578550541,22.8023878927589,19.2099289105618,23.8644308612835,64.9934087954401,23.4538579722423,16.1341353892506,17.6589977421042,24.2146272118861,23.0605640045513,31.2785960980975,23.625319169979,23.9779118702343,13.5923395504717,30.0767587662957,19.0884882937943,26.7218237337076,21.819386391085,26.0948465705371,13.1751358655196,16.127396424636,20.1811073614787,27.9169240098794,27.5955256256968,31.6404865411931,12.5824137100051,12.3525162761029,15.2041766056566,11.298580812498,14.3200656104985,9.55825004973976,12.0058534670141,23.3212143217224,31.5993705349636,18.9542068825256,17.0457903268044,17.0457780281142,18.3921683546778,16.7457780718975,20.9479696791644,20.4109497453984,21.5231050078548,21.6450983732974,17.5918292102531,16.5987354558289,17.2086532952716,19.0027214097065,16.001288467213,21.409638190371,24.3776516565517,31.8962311432312,17.5150154800274,25.9818879305897,34.7419674604865,29.8371674365372,14.4988040774851,15.2441938987713,12.604344302271,12.7842157216014,13.3799677588235,12.9584374825398,13.2544348507732,16.3646774853768,17.2812706703411,11.0255099442032,14.7750717671186,15.8894866709877,15.4971986670852,16.9053588774109,16.238976670005,15.1408762966172,15.3327872445134,32.3810407324122,20.6271441997565,16.2099070406778,19.043407092556,18.9435168143477,24.2020229548011,18.6797556829691,21.1150444984941,17.0830462156024,25.5283379822217,25.3848560888272,28.8486884459669,21.2510854959841,15.2799299471218,20.7492527879706,25.6892242498134,21.2428049067451,18.7367560679955,21.4144697778853,17.3103628668517,14.9343415119072,26.2307966389791,23.2078091246024,17.5656076095727,23.2358117205235,23.9390498008293,20.1587786419261,24.3593854345497,23.193961423358,27.658039823337,24.5460746880089,33.7648023653384,28.7727212513004,29.9203982948843,35.0212089834076,28.5543869715605,24.4405951096503,32.3762624471598,29.0195035996541,20.4588891137161,17.5809465251474,44.3848039654298,26.4197061938245,14.4013472945568,15.9705676913185,17.8232340063948,20.1833613528112,20.6032696653433,22.8521895250573,28.2943789393808,24.1181770482472,25.0255099303116,25.6722177538554,27.529036872244,25.7300622980184,28.9298117163023,85.9510318453852,49.4954172275026,24.0964493779328,28.9733583619969,11.8807436590966,11.9555920324047,14.7541450839008,16.1581393410799,10.4117712407365,11.7131623288992,18.7418356027535,27.2424429665909,30.9690156974528,30.8553418559827,17.0020494703456,20.7501659117031,18.5785255634866,14.4594592389813,23.1362338889478,20.2994788180671,28.1794439681687,26.5601897985782,11.9470624505967,21.1219153454834,20.8603254305678,16.2200368590072,15.651000322681,18.7535440245796,26.1012576099903,22.5390912276053,21.746340081468,20.542389265828,18.9753495434998,12.3762651897824,19.4050575279659,19.9867814374754,21.7322588755028,18.4329850127169,20.2167866352192,18.1936193954112,17.2776471632227,19.1812917942198,19.477751769288,22.4541995115649,33.2997881062992,44.1895157883166,38.1056047002337,30.3977141637906,31.6336711608312,33.3206026482474,22.4440244204985,11.1255181206306,37.9333355371233,24.3536504196603,34.4461820907664,35.0365330028725,29.7993416431835,29.7411625168479,35.1855350087281,33.7283000100016,29.2983944465378,23.8667654503778,15.8167996790568,18.5020715085432,21.6010681643603,21.7451827855047,23.5831568845872,23.6012606173436,25.0439970847768,26.437350140387,28.2560641776108,23.6108938973032,91.881949005523,17.3439193411015,19.0277264025662,14.7782903141476,17.0490966990605,14.6991829176977,21.945803626756,18.4890226478409,17.6163698635194,43.9683099903331,43.7805609511956,26.544934132767,20.6779719595967,25.4723173768772,22.0865399062252,23.0944437411051,24.4378066380956,28.2459306371927,26.8794939457731,28.4725388853776,33.2261677015799,32.7685101694732,32.8433058092966,32.8082379993523,36.2318396762864,21.3126560598299,9.32341004171072,12.2907983554982,9.23365390002431,23.7623200659594,26.6509115140678,27.4727436400898,33.2270987572552,24.0754609936974,9.60078132449013,8.74617949363636,7.44764167471216,12.7171354934329,8.22099023724771,8.3093328712867,9.45031500324528,9.45674526770863,8.15656336171568,9.83744592328458,13.0772057956063,18.7541690498485,16.561159758151,18.4761104971903,14.4633082213308,11.9498280492509,19.7799587743438,14.6284890639615,12.5158491740808,19.2049880940486,15.4622372933046,16.7877443833608,15.6381317474704,16.7745899300758,19.5854949138641,19.0517476513229,14.7173093949966,15.2398284166327,17.7196937345422,16.7806768953213,12.343293085875,14.9079677173843,17.8827142460491,15.9881058295561,14.2105164427149,19.4613598150856,18.1098693144045,20.5194374921517,19.0125759384206,16.8342681497322,14.2362021749009,16.4502485567191,10.6400071224119,16.2683683245264,19.6764743200764,21.4837097026634,18.4805970671873,21.0573632967332,24.6761948368808,23.8238732649077,17.8538233427725 | ||
|short_description=p1@Bin3 | |short_description=p1@Bin3 | ||
}} | }} |
Latest revision as of 08:05, 26 September 2015
Short description: | p1@Bin3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bin3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000022680, NM_021328, uc007une.1_5end |
EntrezGene: | Bin3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.14e-10 | 48 |
immune system | 2.14e-10 | 48 |
hematopoietic system | 4.50e-09 | 45 |
blood island | 4.50e-09 | 45 |
musculoskeletal system | 5.69e-09 | 32 |
digestive system | 2.95e-08 | 116 |
digestive tract | 2.95e-08 | 116 |
primitive gut | 2.95e-08 | 116 |
endoderm-derived structure | 3.08e-08 | 118 |
endoderm | 3.08e-08 | 118 |
presumptive endoderm | 3.08e-08 | 118 |
subdivision of digestive tract | 1.22e-07 | 114 |
mesoderm | 1.88e-07 | 120 |
mesoderm-derived structure | 1.88e-07 | 120 |
presumptive mesoderm | 1.88e-07 | 120 |