FFCP PHASE1:Mm9::chr12:112659658..112659667,+: Difference between revisions
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|id=chr12:112659658..112659667,+
|short_description=p8@1200009I06Rik
|description=CAGE_peak_8_at_1200009I06Rik_5end
|association_with_transcript=-42bp_to_uc011yuw.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74190 | |EntrezGene=74190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_uc011yuw.1_5end | |||
|cluster_id=chr12:112659658..112659667,+ | |||
|description=CAGE_peak_8_at_1200009I06Rik_5end | |||
|id=chr12:112659658..112659667,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.60e-07!6;CL:0000677!9.60e-07!6;CL:0000212!9.60e-07!6;CL:0000584!9.60e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.96e-12,6;CL:0000677,2.96e-12,6;CL:0000584,2.96e-12,6;CL:0000075,1.60e-10,7;CL:0002563,3.34e-08,9;CL:0002251,3.34e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.97e-15!43;UBERON:0000344!1.43e-10!15;UBERON:0005409!9.64e-10!59;UBERON:0004923!4.06e-09!24;UBERON:0001242!1.92e-08!13;UBERON:0000060!1.92e-08!13;UBERON:0001262!1.92e-08!13;UBERON:0004786!1.92e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.58e-37,31;UBERON:0005409,7.64e-24,47;UBERON:0000344,1.32e-17,15;UBERON:0001242,5.38e-16,13;UBERON:0001262,5.38e-16,13;UBERON:0004786,5.38e-16,13;UBERON:0004923,1.31e-10,24;UBERON:0002108,3.31e-10,4;UBERON:0001007,4.08e-09,116;UBERON:0001555,4.08e-09,116;UBERON:0007026,4.08e-09,116;UBERON:0004119,6.56e-09,118;UBERON:0000925,6.56e-09,118;UBERON:0006595,6.56e-09,118;UBERON:0003350,3.34e-08,9;UBERON:0004808,3.34e-08,9;UBERON:0001277,3.34e-08,9;UBERON:0004921,3.71e-08,114 | |||
|phase1_expression=0,4.18770489167233,1.81999695755814,10.2837831844322,6.01074875935617,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,1.27993938234725,0.45881856213434,1.72269589234506,0.86152399231815,1.50829862880122,2.09025761402011,1.51218077855958,0.221730510655305,0.635030673459631,2.46025915033828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0,0.16455984991348,0.656669856316381,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,11.2342386214491,1.85115396664481,0,0,0,0.201683524623343,0.22237804384487,1.33157938278791,1.42358718463353,2.30578536613615,0.754005626400808,0.994782360205754,1.9496408711912,2.69645822596266,1.72910439899755,1.7922714592893,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,4.18770489167233,1.81999695755814,10.2837831844322,6.01074875935617,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,1.27993938234725,0.45881856213434,1.72269589234506,0.86152399231815,1.50829862880122,2.09025761402011,1.51218077855958,0.221730510655305,0.635030673459631,2.46025915033828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.536546802799238,0,0.16455984991348,0.656669856316381,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,11.2342386214491,1.85115396664481,0,0,0,0.201683524623343,0.22237804384487,1.33157938278791,1.42358718463353,2.30578536613615,0.754005626400808,0.994782360205754,1.9496408711912,2.69645822596266,1.72910439899755,1.7922714592893,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0,0,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p8@1200009I06Rik | |||
}} | }} |
Latest revision as of 08:26, 26 September 2015
Short description: | p8@1200009I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_1200009I06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -42bp_to_uc011yuw.1_5end |
EntrezGene: | 1200009I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.96e-12 | 6 |
gut absorptive cell | 2.96e-12 | 6 |
enterocyte | 2.96e-12 | 6 |
columnar/cuboidal epithelial cell | 1.60e-10 | 7 |
intestinal epithelial cell | 3.34e-08 | 9 |
epithelial cell of alimentary canal | 3.34e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.58e-37 | 31 |
gastrointestinal system | 7.64e-24 | 47 |
mucosa | 1.32e-17 | 15 |
intestinal mucosa | 5.38e-16 | 13 |
wall of intestine | 5.38e-16 | 13 |
gastrointestinal system mucosa | 5.38e-16 | 13 |
organ component layer | 1.31e-10 | 24 |
small intestine | 3.31e-10 | 4 |
digestive system | 4.08e-09 | 116 |
digestive tract | 4.08e-09 | 116 |
primitive gut | 4.08e-09 | 116 |
endoderm-derived structure | 6.56e-09 | 118 |
endoderm | 6.56e-09 | 118 |
presumptive endoderm | 6.56e-09 | 118 |
epithelium of mucosa | 3.34e-08 | 9 |
gastrointestinal system epithelium | 3.34e-08 | 9 |
intestinal epithelium | 3.34e-08 | 9 |
subdivision of digestive tract | 3.71e-08 | 114 |