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FFCP PHASE1:Mm9::chr4:126430231..126430298,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:126430231..126430298,-
|DHSsupport=NA
|short_description=p4@Ncdn
|DPIdataset=NA
|description=CAGE_peak_4_at_Ncdn_5end
|association_with_transcript=354bp_to_ENSMUST00000030637_5end
|EntrezGene=26562
|EntrezGene=26562
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q9Z0E0
|UniProt=Q9Z0E0
|association_with_transcript=354bp_to_ENSMUST00000030637_5end
|cluster_id=chr4:126430231..126430298,-
|description=CAGE_peak_4_at_Ncdn_5end
|id=chr4:126430231..126430298,-
|ontology_enrichment_celltype=CL:0000117!9.64e-09!23;CL:0000337!9.64e-09!23;CL:0002319!5.20e-08!43;CL:0000221!1.30e-07!44;CL:0000133!1.30e-07!44;CL:0000540!6.41e-07!33;CL:0000047!6.41e-07!33;CL:0000031!6.41e-07!33;CL:0000404!6.41e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002610,5.37e-09,3;CL:0000117,6.17e-09,23;CL:0000337,6.17e-09,23;CL:0002614,1.44e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.29e-23!75;UBERON:0001016!3.29e-23!75;UBERON:0001049!3.97e-22!52;UBERON:0005068!3.97e-22!52;UBERON:0006241!3.97e-22!52;UBERON:0007135!3.97e-22!52;UBERON:0001017!4.81e-22!73;UBERON:0005743!4.81e-22!73;UBERON:0000955!3.77e-21!50;UBERON:0006238!3.77e-21!50;UBERON:0002616!2.24e-20!49;UBERON:0002020!6.79e-19!34;UBERON:0000033!3.69e-18!63;UBERON:0002346!1.32e-17!71;UBERON:0003075!1.32e-17!71;UBERON:0007284!1.32e-17!71;UBERON:0004121!3.97e-17!102;UBERON:0000924!3.97e-17!102;UBERON:0006601!3.97e-17!102;UBERON:0002791!2.06e-15!29;UBERON:0003528!2.06e-15!29;UBERON:0001893!2.06e-15!29;UBERON:0003080!3.97e-15!40;UBERON:0003056!8.75e-15!49;UBERON:0002780!2.54e-14!39;UBERON:0001890!2.54e-14!39;UBERON:0006240!2.54e-14!39;UBERON:0007811!2.78e-14!86;UBERON:0000153!1.90e-13!94;UBERON:0000956!2.68e-11!21;UBERON:0001869!2.68e-11!21;UBERON:0000203!2.68e-11!21;UBERON:0002619!6.67e-10!17;UBERON:0002021!3.93e-09!10;UBERON:0000411!3.93e-09!10;UBERON:0001950!3.93e-09!10;UBERON:0003076!7.70e-08!12;UBERON:0003057!7.70e-08!12;UBERON:0000064!2.75e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.98e-38,54;UBERON:0001049,1.03e-33,52;UBERON:0005068,1.03e-33,52;UBERON:0006241,1.03e-33,52;UBERON:0007135,1.03e-33,52;UBERON:0001017,1.29e-30,73;UBERON:0001016,1.30e-29,75;UBERON:0002346,3.91e-28,64;UBERON:0003075,3.91e-28,64;UBERON:0007284,3.91e-28,64;UBERON:0000955,1.35e-27,47;UBERON:0006238,1.35e-27,47;UBERON:0002020,1.97e-26,34;UBERON:0002616,6.79e-26,46;UBERON:0010371,7.59e-24,73;UBERON:0004121,1.93e-23,95;UBERON:0000924,1.93e-23,95;UBERON:0006601,1.93e-23,95;UBERON:0002021,2.62e-22,10;UBERON:0000411,2.62e-22,10;UBERON:0001950,2.62e-22,10;UBERON:0003528,1.13e-20,29;UBERON:0002791,1.13e-20,29;UBERON:0001893,1.13e-20,29;UBERON:0003080,2.03e-20,40;UBERON:0002780,1.11e-18,39;UBERON:0001890,1.11e-18,39;UBERON:0006240,1.11e-18,39;UBERON:0010314,1.52e-17,92;UBERON:0003056,1.80e-17,49;UBERON:0002619,3.81e-15,17;UBERON:0003076,1.92e-14,12;UBERON:0003057,1.92e-14,12;UBERON:0000956,3.26e-14,21;UBERON:0001869,3.26e-14,21;UBERON:0000203,3.26e-14,21;UBERON:0000025,7.93e-12,114;UBERON:0004111,1.34e-11,122;UBERON:0002950,6.21e-11,4;UBERON:0001891,6.21e-11,4;UBERON:0009616,6.21e-11,4;UBERON:0010286,6.21e-11,4;UBERON:0002240,2.36e-09,6;UBERON:0005174,2.36e-09,6;UBERON:0001137,2.36e-09,6;UBERON:0004684,5.37e-09,3;UBERON:0002275,5.37e-09,3;UBERON:0002038,1.44e-08,3;UBERON:0009663,1.44e-08,3;UBERON:0009661,1.44e-08,3;UBERON:0000125,1.44e-08,3;UBERON:0002308,1.44e-08,3;UBERON:0011216,9.04e-08,194;UBERON:0002420,1.12e-07,8;UBERON:0007245,1.12e-07,8;UBERON:0010009,1.12e-07,8;UBERON:0010011,1.12e-07,8;UBERON:0000454,1.12e-07,8;UBERON:0001948,3.93e-07,5;UBERON:0002315,3.93e-07,5;UBERON:0000483,8.58e-07,174;UBERON:0004733,9.89e-07,6;UBERON:0004732,9.89e-07,6;UBERON:0002028,9.89e-07,6;UBERON:0007277,9.89e-07,6
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,3.656861476496,0,0,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,8.56952953211411,7.50953039235486,0.244981598429908,0.0958454710182364,0,39.6417171597799,32.9433332259784,31.7965523840424,0.395658863190582,0.548925861614458,0,34.8978748751726,21.3849791812038,18.3357897332172,6.18720029494702,4.12877874317399,0.745597783301202,0.37863096666592,0.604572480854284,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0.505524445014783,0.5709193985953,0.258937883647172,0,0,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,8.78342391034641,7.74952815209784,0,0,0,0.127070227073065,29.8083372415597,24.7050325522058,2.26177833803156,14.4274185759589,10.2286182932132,38.8563643326377,25.1473957755024,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.281105173679186,1.55222022443409,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,28.5994330047213,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,33.7156238974363,27.3103229759833,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,11.2462460747632,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.913394847343798,0,0,0.441056796109924,0,0,0,0.119372344003136,0,0,31.8931519458077,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,3.00943262421218,16.942555278512,11.0478056761722,11.4579102687879,10.6548973053086,16.4419804744954,11.3309084608455,16.8755625057951,11.7083512838297,9.5159905886683,12.9440077937955,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.229741875822453,0.952587382566147,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,3.656861476496,0,0,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,8.56952953211411,7.50953039235486,0.244981598429908,0.0958454710182364,0,39.6417171597799,32.9433332259784,31.7965523840424,0.395658863190582,0.548925861614458,0,34.8978748751726,21.3849791812038,18.3357897332172,6.18720029494702,4.12877874317399,0.745597783301202,0.37863096666592,0.604572480854284,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0.505524445014783,0.5709193985953,0.258937883647172,0,0,0.608930956624282,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,8.78342391034641,7.74952815209784,0,0,0,0.127070227073065,29.8083372415597,24.7050325522058,2.26177833803156,14.4274185759589,10.2286182932132,38.8563643326377,25.1473957755024,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.281105173679186,1.55222022443409,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,28.5994330047213,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,33.7156238974363,27.3103229759833,0.163934945376675,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,11.2462460747632,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.913394847343798,0,0,0.441056796109924,0,0,0,0.119372344003136,0,0,31.8931519458077,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,3.00943262421218,16.942555278512,11.0478056761722,11.4579102687879,10.6548973053086,16.4419804744954,11.3309084608455,16.8755625057951,11.7083512838297,9.5159905886683,12.9440077937955,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.229741875822453,0.952587382566147,0.115884325944855,0,0,0,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p4@Ncdn
}}
}}

Latest revision as of 08:35, 26 September 2015

Short description:p4@Ncdn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ncdn_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 354bp_to_ENSMUST00000030637_5end
EntrezGene:Ncdn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ncdn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A429.81
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F238.86
diencephalon, neonate N30.CNhs11201.1388-42B225.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E828.60
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C233.72
medulla oblongata, neonate N30.CNhs11200.1396-42A327.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C931.89
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron5.37e-093
CNS neuron (sensu Vertebrata)6.17e-0923
neuroblast (sensu Vertebrata)6.17e-0923
neuron of the substantia nigra1.44e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.98e-3854
neural tube1.03e-3352
neural rod1.03e-3352
future spinal cord1.03e-3352
neural keel1.03e-3352
central nervous system1.29e-3073
nervous system1.30e-2975
neurectoderm3.91e-2864
neural plate3.91e-2864
presumptive neural plate3.91e-2864
brain1.35e-2747
future brain1.35e-2747
gray matter1.97e-2634
regional part of brain6.79e-2646
ecto-epithelium7.59e-2473
ectoderm-derived structure1.93e-2395
ectoderm1.93e-2395
presumptive ectoderm1.93e-2395
occipital lobe2.62e-2210
visual cortex2.62e-2210
neocortex2.62e-2210
brain grey matter1.13e-2029
regional part of telencephalon1.13e-2029
telencephalon1.13e-2029
anterior neural tube2.03e-2040
regional part of forebrain1.11e-1839
forebrain1.11e-1839
future forebrain1.11e-1839
structure with developmental contribution from neural crest1.52e-1792
pre-chordal neural plate1.80e-1749
regional part of cerebral cortex3.81e-1517
posterior neural tube1.92e-1412
chordal neural plate1.92e-1412
cerebral cortex3.26e-1421
cerebral hemisphere3.26e-1421
pallium3.26e-1421
tube7.93e-12114
anatomical conduit1.34e-11122
regional part of midbrain6.21e-114
midbrain6.21e-114
presumptive midbrain6.21e-114
midbrain neural tube6.21e-114
spinal cord2.36e-096
dorsal region element2.36e-096
dorsum2.36e-096
raphe nuclei5.37e-093
reticular formation5.37e-093
substantia nigra1.44e-083
telencephalic nucleus1.44e-083
midbrain nucleus1.44e-083
neural nucleus1.44e-083
nucleus of brain1.44e-083
organ system subdivision9.04e-08194
basal ganglion1.12e-078
nuclear complex of neuraxis1.12e-078
aggregate regional part of brain1.12e-078
collection of basal ganglia1.12e-078
cerebral subcortex1.12e-078
regional part of spinal cord3.93e-075
gray matter of spinal cord3.93e-075
epithelium8.58e-07174
segmental subdivision of hindbrain9.89e-076
segmental subdivision of nervous system9.89e-076
hindbrain9.89e-076
presumptive hindbrain9.89e-076
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