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FFCP PHASE1:Mm9::chr4:126430954..126430973,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:126430954..126430973,-
|DHSsupport=NA
|short_description=p5@Ncdn
|DPIdataset=NA
|description=CAGE_peak_5_at_Ncdn_5end
|association_with_transcript=-272bp_to_ENSMUST00000127079_5end
|EntrezGene=26562
|EntrezGene=26562
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-272bp_to_ENSMUST00000127079_5end
|cluster_id=chr4:126430954..126430973,-
|description=CAGE_peak_5_at_Ncdn_5end
|id=chr4:126430954..126430973,-
|ontology_enrichment_celltype=CL:0000117!8.41e-12!23;CL:0000337!8.41e-12!23;CL:0000540!9.31e-11!33;CL:0000047!9.31e-11!33;CL:0000031!9.31e-11!33;CL:0000404!9.31e-11!33;CL:0002319!2.49e-10!43;CL:0000221!4.46e-10!44;CL:0000133!4.46e-10!44;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39;CL:0000055!7.73e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.05e-17,23;CL:0000337,4.05e-17,23;CL:0000540,6.01e-15,33;CL:0000047,6.01e-15,33;CL:0000031,6.01e-15,33;CL:0000404,6.01e-15,33;CL:0002319,6.58e-12,43;CL:0000393,1.69e-11,39;CL:0000211,1.69e-11,39;CL:0000221,1.85e-11,44;CL:0000133,1.85e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.32e-23!75;UBERON:0001016!2.32e-23!75;UBERON:0001017!4.53e-23!73;UBERON:0005743!4.53e-23!73;UBERON:0001049!8.31e-21!52;UBERON:0005068!8.31e-21!52;UBERON:0006241!8.31e-21!52;UBERON:0007135!8.31e-21!52;UBERON:0004121!4.36e-20!102;UBERON:0000924!4.36e-20!102;UBERON:0006601!4.36e-20!102;UBERON:0000955!8.38e-20!50;UBERON:0006238!8.38e-20!50;UBERON:0000033!8.97e-20!63;UBERON:0002346!2.95e-19!71;UBERON:0003075!2.95e-19!71;UBERON:0007284!2.95e-19!71;UBERON:0002616!4.25e-19!49;UBERON:0002020!7.16e-18!34;UBERON:0003056!2.02e-15!49;UBERON:0003080!2.42e-15!40;UBERON:0002791!6.86e-15!29;UBERON:0003528!6.86e-15!29;UBERON:0001893!6.86e-15!29;UBERON:0002780!1.10e-14!39;UBERON:0001890!1.10e-14!39;UBERON:0006240!1.10e-14!39;UBERON:0007811!1.13e-10!86;UBERON:0000956!1.39e-10!21;UBERON:0001869!1.39e-10!21;UBERON:0000203!1.39e-10!21;UBERON:0000153!5.15e-10!94;UBERON:0002619!5.13e-09!17;UBERON:0002021!1.98e-07!10;UBERON:0000411!1.98e-07!10;UBERON:0001950!1.98e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.40e-33,54;UBERON:0001017,5.31e-32,73;UBERON:0001016,1.04e-30,75;UBERON:0001049,2.73e-30,52;UBERON:0005068,2.73e-30,52;UBERON:0006241,2.73e-30,52;UBERON:0007135,2.73e-30,52;UBERON:0002346,4.19e-30,64;UBERON:0003075,4.19e-30,64;UBERON:0007284,4.19e-30,64;UBERON:0002020,3.58e-29,34;UBERON:0004121,3.66e-26,95;UBERON:0000924,3.66e-26,95;UBERON:0006601,3.66e-26,95;UBERON:0000955,5.34e-25,47;UBERON:0006238,5.34e-25,47;UBERON:0010371,1.55e-24,73;UBERON:0002616,8.37e-24,46;UBERON:0003528,1.21e-23,29;UBERON:0002791,1.21e-23,29;UBERON:0001893,1.21e-23,29;UBERON:0003056,1.14e-21,49;UBERON:0003080,2.25e-21,40;UBERON:0002780,3.18e-20,39;UBERON:0001890,3.18e-20,39;UBERON:0006240,3.18e-20,39;UBERON:0010314,1.87e-16,92;UBERON:0000956,1.08e-15,21;UBERON:0001869,1.08e-15,21;UBERON:0000203,1.08e-15,21;UBERON:0002619,5.17e-14,17;UBERON:0002021,1.34e-12,10;UBERON:0000411,1.34e-12,10;UBERON:0001950,1.34e-12,10;UBERON:0003076,2.58e-09,12;UBERON:0003057,2.58e-09,12;UBERON:0002420,3.52e-09,8;UBERON:0007245,3.52e-09,8;UBERON:0010009,3.52e-09,8;UBERON:0010011,3.52e-09,8;UBERON:0000454,3.52e-09,8;UBERON:0000025,4.56e-08,114;UBERON:0002240,8.22e-08,6;UBERON:0005174,8.22e-08,6;UBERON:0001137,8.22e-08,6;UBERON:0004111,3.02e-07,122
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|phase1_expression=0.640595388419176,0.697950815278722,0,0,0.500895729946347,0.671517087647559,0.467225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0.342401459862411,0,0,0.404950534779652,0,0.315462165358238,0,0,1.10556277196391,0.695036658406197,0.261199789138935,1.75991665072747,0.91763712426868,1.14846392823004,0.86152399231815,0.646413698057667,1.14014051673824,0,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,3.9119567217402,0.436050312760893,1.09843091367236,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.22548106945558,1.5869729378161,0.633831403506179,1.0165335962074,1.77858959222228,1.7997994345628,0,2.8419204597844,0.898800331555214,0.768436610643109,0.829516898467821,1.62007125998029,1.47227472945967,4.28476476605705,5.52171352379034,1.83736198822431,1.24599112323707,0.919218786610021,4.40463523997555,5.87361755191863,5.68344173048101,2.1101806036831,2.37867873366265,2.08365348222704,4.74611098302348,1.68828783009504,5.34793867218835,2.35702868378934,3.55929201997757,3.54158947068071,0.984440513331393,0.604572480854284,0,0,0,0,0.649776417447669,0,0.280888840263504,0.511290967734173,0.259786004602869,1.41335829804136,0.422530259330042,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,0.517875767294343,0.29688427812965,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,1.8850203613211,1.27728527604296,0.11981512450592,0,0.635351135365324,5.99162557619291,3.20250421973039,2.63874139437015,6.08385120672968,3.83573185995496,4.57133698031032,5.67844420737152,0.712875546952214,0.124406970610093,1.0108910337347,1.05220927943237,0.260240885925407,0,1.62055916824814,1.05493372485001,0.884474488967262,0.512454881139399,1.12442069471675,1.03481348295606,0.862271971731369,0.756424320671277,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0.702213187313235,0,0.568326998791185,0.621377317606506,0.703578179943289,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,0,0.536546802799238,0.467061369468678,0.16455984991348,0,0.162137619091711,0.292399974850665,0.658650345873152,0.402619256281115,6.9395683026162,1.54356918568927,0.660837565967596,0.264450566663544,0.213288250535234,0.696710015581316,0.38660238396628,0.201683524623343,0.889512175379481,0.570676878337677,0.474529061544512,1.4822905925161,1.00534083520108,0.596869416123452,0.38992817423824,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.49095073923223,0.442655759869801,0,0.784993639206874,0.246794327843601,0,0.333690211432188,0.786235980452812,0.449724224769707,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0,0,0.923765950833023,0.757965647081939,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,1.19021820443007,0.390267295715598,0.315270288212382,0,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0.551873492609465,4.49541651965817,3.39913891117389,0.819674726883377,0.504941854408746,0.94652465824877,1.95219372148319,0.430846795465598,0.238968797952552,1.11399337041197,1.41538265394416,0.404810701674894,1.16902343164525,0,6.10510501201433,0,0.712262414669021,0.651547837414304,0.659880491890142,0,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,1.06949213515416,0.632073515871632,1.05418608574999,0,0.680879211507576,0.900305470156551,0.905510786479282,0.428674070063185,0.354680467284547,0.356737635204141,0.329098041204242,1.522324745573,0.23467170806371,0.42366414172764,0.220528398054962,0,0.807322133479528,0.603129249281559,0.716234064018819,0.492422699235184,0.291480836629851,4.63563255026274,0,0,0.925972636848558,0.188368457004691,0,0.228778173206523,0.339956859987711,0.419854356970974,0,0,0.949007980743406,1.01659733563424,0.86404272657441,0.209088296014469,0.87345025498471,0.539457385539283,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.675824501963113,0.704143431874524,0.781226309063701,1.04859344425711,0.241584120826006,0,0.632022241256357,0.202725215290164,0.410843828659309,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.533447646584999,0.504130925684203,0.292373642219257,0.577271049841977,0.116876902181569,0.906921534460845,0.887943813496259,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,1.00314420807073,5.0827665835536,5.06357760157895,7.44764167471216,6.18671456437275,3.42541259885321,7.55393897389701,3.37511250115903,1.35096360967266,6.34399372577886,4.14208249401456,0.726511433089237,1.19707462020309,0.682934423016537,1.21553358534147,0.628839487883947,0.367687016900028,0.666740183404846,1.03017528619447,0.64183841918363,1.26348605881899,1.01391719956096,0.943131706930381,0.468207537349412,0.704276676453562,0.631790158511746,0,0.579421629724277,0.578727661391115,0,0.883193520806384,0,0.354951612318675,0.476872379894642,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.689531376628944,0.409231043169689,0.77468420592983,0.578719832943424,1.99848462350357,1.40358965067245,1.28922632428979,1.3390183244819,0.882365676478062,0.463735671240843
|short_description=p5@Ncdn
}}
}}

Latest revision as of 08:36, 26 September 2015

Short description:p5@Ncdn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ncdn_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -272bp_to_ENSMUST00000127079_5end
EntrezGene:Ncdn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ncdn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.05e-1723
neuroblast (sensu Vertebrata)4.05e-1723
neuron6.01e-1533
neuronal stem cell6.01e-1533
neuroblast6.01e-1533
electrically signaling cell6.01e-1533
neural cell6.58e-1243
electrically responsive cell1.69e-1139
electrically active cell1.69e-1139
ectodermal cell1.85e-1144
neurectodermal cell1.85e-1144

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.40e-3354
central nervous system5.31e-3273
nervous system1.04e-3075
neural tube2.73e-3052
neural rod2.73e-3052
future spinal cord2.73e-3052
neural keel2.73e-3052
neurectoderm4.19e-3064
neural plate4.19e-3064
presumptive neural plate4.19e-3064
gray matter3.58e-2934
ectoderm-derived structure3.66e-2695
ectoderm3.66e-2695
presumptive ectoderm3.66e-2695
brain5.34e-2547
future brain5.34e-2547
ecto-epithelium1.55e-2473
regional part of brain8.37e-2446
brain grey matter1.21e-2329
regional part of telencephalon1.21e-2329
telencephalon1.21e-2329
pre-chordal neural plate1.14e-2149
anterior neural tube2.25e-2140
regional part of forebrain3.18e-2039
forebrain3.18e-2039
future forebrain3.18e-2039
structure with developmental contribution from neural crest1.87e-1692
cerebral cortex1.08e-1521
cerebral hemisphere1.08e-1521
pallium1.08e-1521
regional part of cerebral cortex5.17e-1417
occipital lobe1.34e-1210
visual cortex1.34e-1210
neocortex1.34e-1210
posterior neural tube2.58e-0912
chordal neural plate2.58e-0912
basal ganglion3.52e-098
nuclear complex of neuraxis3.52e-098
aggregate regional part of brain3.52e-098
collection of basal ganglia3.52e-098
cerebral subcortex3.52e-098
tube4.56e-08114
spinal cord8.22e-086
dorsal region element8.22e-086
dorsum8.22e-086
anatomical conduit3.02e-07122
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